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Annals of Laboratory Medicine

1981  to  Present  ISSN: 2234-3806

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Epidemiological Study of Erythromycin-Resistant Streptococcus pyogenes From Korea and Japan by emm Genotyping and Multilocus Sequence Typing.

Takashi TAKAHASHI ; Kazuaki ARAI ; Dong Hyun LEE ; Eun Ha KOH ; Haruno YOSHIDA ; Hisakazu YANO ; Mitsuo KAKU ; Sunjoo KIM

Annals of Laboratory Medicine.2016;36(1):9-14. doi:10.3343/alm.2016.36.1.9

BACKGROUND: We determined the epidemiological characteristics of erythromycin (EM)-resistant Streptococcus pyogenes (group A streptococci, GAS) strains isolated from Korea and Japan, using emm genotyping and multilocus sequence typing (MLST). METHODS: Clinical isolates of GAS had been collected from 1992 to 2012 in Korea and from 2004 to 2009 in Japan. EM resistance was determined by the microdilution method, and resistance genotypes were assessed by PCR. The emm genotyping and MLST were performed by DNA sequencing. RESULTS: The emm genotypes and sequence types (STs) were concordant in 143 (85.1%) of 168 EM-resistant GAS strains from Korea. ST36/emm12 (35.1%), ST52/emm28 (22.6%), and ST49/emm75 (16.1%) were the most common types. Most of the ST36 (93.9%) and ST52 (95.8%) strains harbored erm(B), whereas strains ST49, ST42, and ST15 contained mef(A). The concordance between emm genotypes and STs was 41 (93.2%) among 44 EM-resistant GAS strains from Japan. ST36/emm12 (34.1%), ST49/emm75 (18.2%), and ST28/emm1 (15.9%) were the major types. ST36 isolates harbored either erm(B) (56.3%) or mef(A) (37.5%), whereas isolates ST28, ST49, and ST38 carried only mef(A). The proportion of erm(B) and mef(A) was 66.1% and 33.3% in Korea and 22.7% and 68.2% in Japan, respectively. CONCLUSIONS: The common STs in Korea and Japan were ST36 and ST49, whereas ST52 was present only in Korea and ST28 only in Japan. Genotype erm(B) was predominant in Korea, whereas mef(A) was frequent in Japan. There were differences between Korea and Japan regarding the frequencies of emm genotypes, STs, and EM resistance genes among the EM-resistant GAS.
Anti-Bacterial Agents/*pharmacology/therapeutic use ; Bacterial Proteins/*genetics ; Bacterial Typing Techniques ; *Drug Resistance, Bacterial ; Epidemiologic Studies ; Erythromycin/*pharmacology/therapeutic use ; Genotype ; Humans ; Japan/epidemiology ; Microbial Sensitivity Tests ; Multilocus Sequence Typing ; Republic of Korea/epidemiology ; Streptococcal Infections/drug therapy/*microbiology ; Streptococcus pyogenes/drug effects/*genetics/isolation & purification

Anti-Bacterial Agents/*pharmacology/therapeutic use ; Bacterial Proteins/*genetics ; Bacterial Typing Techniques ; *Drug Resistance, Bacterial ; Epidemiologic Studies ; Erythromycin/*pharmacology/therapeutic use ; Genotype ; Humans ; Japan/epidemiology ; Microbial Sensitivity Tests ; Multilocus Sequence Typing ; Republic of Korea/epidemiology ; Streptococcal Infections/drug therapy/*microbiology ; Streptococcus pyogenes/drug effects/*genetics/isolation & purification

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Immature Platelet Fraction in Septic Patients: Clinical Relevance of Immature Platelet Fraction is Limited to the Sensitive and Accurate Discrimination of Septic Patients From Non-Septic Patients, Not to the Discrimination of Sepsis Severity.

Sang Hyuk PARK ; Sang Ook HA ; Young Uk CHO ; Chan Jeoung PARK ; Seongsoo JANG ; Sang Bum HONG

Annals of Laboratory Medicine.2016;36(1):1-8. doi:10.3343/alm.2016.36.1.1

BACKGROUND: The immature platelet fraction (IPF) reflects the degree of reticulated platelets. We evaluated performances of IPF as a biomarker for the discrimination of septic patients from non-septic patients and sepsis severity. METHODS: Total 312 patients admitted between March and July 2013 were enrolled and samples were obtained at admission. Lactate (LA), procalcitonin (PCT), C-reactive protein (CRP), immature granulocyte fraction (IG), immature reticulocyte fraction (IRF), and IPF were analyzed as sepsis biomarkers and their performances were compared. RESULTS: The performance of IPF (area under the curve [AUC]=0.868) in the discrimination of septic patients from non-septic patients was comparable to PCT/CRP/LA/IG (AUC=0.923/0.940/0.781/0.812, P=0.233/0.106/0.186/0.353, respectively), and was significantly better than the IRF (AUC=0.658, P=0.007). Sensitivity (89.8%, 95% confidence interval [CI] 84.9-99.8%) and accuracy (83.2%, 95% CI 78.8-90.0%) of IPF were the best among all biomarkers. The performance of IPF in discriminating septic patients from non-septic patients with local infection showed similar results. However, the IPF could not efficiently discriminate sepsis severity (AUC=0.599), similar to other biomarkers (AUC=0.519-0.752). CONCLUSIONS: The IPF possessed high sensitivity/accuracy in discriminating septic patients from non-septic patients, regardless of local infection status. However, the IPF did not efficiently discriminate sepsis severity. The clinical relevance of IPF as a sepsis biomarker is, therefore, limited to sensitive and accurate discrimination of septic patients from non-septic patients, not discrimination of sepsis severity.
Adult ; Aged ; Aged, 80 and over ; Biomarkers/blood ; Blood Platelets/*pathology ; Female ; Humans ; Male ; Middle Aged ; Reticulocytes/pathology ; Sepsis/*blood/diagnosis ; Young Adult

Adult ; Aged ; Aged, 80 and over ; Biomarkers/blood ; Blood Platelets/*pathology ; Female ; Humans ; Male ; Middle Aged ; Reticulocytes/pathology ; Sepsis/*blood/diagnosis ; Young Adult

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Erratum: Evaluation of the Impact of Automated Specimen Inoculation, Using Previ Isola, on the Quality of and Technical Time for Stool Cultures.

Alexander MISCHNIK ; Marlies TRAMPE ; Stefan ZIMMERMANN

Annals of Laboratory Medicine.2015;35(2):281-281. doi:10.3343/alm.2015.35.2.281

The title of the author was misprinted as Marlies Trampe, M.D., so it should be corrected to Marlies Trampe.

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The cis-AB01 Allele Originated From the A105 Allele, and not From the A102 Allele.

Sung Jin YANG ; Eun Jeong WON ; Duck CHO ; Myung Geun SHIN ; Dong Wook RYANG

Annals of Laboratory Medicine.2015;35(2):279-280. doi:10.3343/alm.2015.35.2.279

No abstract available.
ABO Blood-Group System/*genetics ; Alleles ; Asian Continental Ancestry Group/genetics ; Base Sequence ; Exons ; Genotype ; Humans ; Introns ; Polymorphism, Single Nucleotide ; Republic of Korea

ABO Blood-Group System/*genetics ; Alleles ; Asian Continental Ancestry Group/genetics ; Base Sequence ; Exons ; Genotype ; Humans ; Introns ; Polymorphism, Single Nucleotide ; Republic of Korea

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First Korean Case of SATB2-Associated 2q32-q33 Microdeletion Syndrome.

Nae YU ; Saeam SHIN ; Kyung A LEE

Annals of Laboratory Medicine.2015;35(2):275-278. doi:10.3343/alm.2015.35.2.275

No abstract available.
Asian Continental Ancestry Group/*genetics ; Child ; Chromosome Disorders/*diagnosis ; *Chromosomes, Human, Pair 2 ; Gene Deletion ; Humans ; Male ; Matrix Attachment Region Binding Proteins/*genetics ; Multiplex Polymerase Chain Reaction ; Republic of Korea ; Transcription Factors/*genetics

Asian Continental Ancestry Group/*genetics ; Child ; Chromosome Disorders/*diagnosis ; *Chromosomes, Human, Pair 2 ; Gene Deletion ; Humans ; Male ; Matrix Attachment Region Binding Proteins/*genetics ; Multiplex Polymerase Chain Reaction ; Republic of Korea ; Transcription Factors/*genetics

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A Korean Case of De Novo 18q Deletion Syndrome With a Large Atrial Septal Defect and Cyanosis.

Young Jin KIM ; Tae Sung PARK ; Mi Young HAN ; Hoi Soo YOON ; Yong Sung CHOI

Annals of Laboratory Medicine.2015;35(2):272-274. doi:10.3343/alm.2015.35.2.272

No abstract available.
Asian Continental Ancestry Group/*genetics ; Chromosome Deletion ; Chromosome Disorders/complications/*diagnosis ; Chromosomes, Human, Pair 18 ; Cyanosis/*etiology ; Female ; Heart Septal Defects, Atrial/complications/*diagnosis ; Humans ; Infant ; Karyotyping ; Republic of Korea

Asian Continental Ancestry Group/*genetics ; Chromosome Deletion ; Chromosome Disorders/complications/*diagnosis ; Chromosomes, Human, Pair 18 ; Cyanosis/*etiology ; Female ; Heart Septal Defects, Atrial/complications/*diagnosis ; Humans ; Infant ; Karyotyping ; Republic of Korea

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Two Cases of Shwachman-Diamond Syndrome in Adolescents Confirmed by Genetic Analysis.

Won Kyoung CHO ; In Ah JUNG ; Jiyeon KIM ; Hyojin CHAE ; Myungshin KIM ; Nack Gyun CHUNG ; Byung Kyu SUH

Annals of Laboratory Medicine.2015;35(2):269-271. doi:10.3343/alm.2015.35.2.269

No abstract available.
Adolescent ; Base Sequence ; Bone Marrow Diseases/*diagnosis/diagnostic imaging/genetics ; DNA Mutational Analysis ; Exocrine Pancreatic Insufficiency/*diagnosis/diagnostic imaging/genetics ; Humans ; Lipomatosis/*diagnosis/diagnostic imaging/genetics ; Magnetic Resonance Imaging ; Male ; Mutation ; Proteins/genetics ; Tomography, X-Ray Computed

Adolescent ; Base Sequence ; Bone Marrow Diseases/*diagnosis/diagnostic imaging/genetics ; DNA Mutational Analysis ; Exocrine Pancreatic Insufficiency/*diagnosis/diagnostic imaging/genetics ; Humans ; Lipomatosis/*diagnosis/diagnostic imaging/genetics ; Magnetic Resonance Imaging ; Male ; Mutation ; Proteins/genetics ; Tomography, X-Ray Computed

8

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First Korean Case of Cedecea lapagei Pneumonia in a Patient With Chronic Obstructive Pulmonary Disease.

Sung Kuk HONG ; Jee Soo LEE ; Eui Chong KIM

Annals of Laboratory Medicine.2015;35(2):266-268. doi:10.3343/alm.2015.35.2.266

No abstract available.
Aged ; Asian Continental Ancestry Group ; Enterobacteriaceae/classification/*genetics/isolation & purification ; Humans ; Male ; Phylogeny ; Pneumonia/*diagnosis/microbiology ; Pulmonary Disease, Chronic Obstructive/*diagnosis ; RNA, Ribosomal, 16S/chemistry/genetics/metabolism ; Republic of Korea ; Sequence Analysis, DNA

Aged ; Asian Continental Ancestry Group ; Enterobacteriaceae/classification/*genetics/isolation & purification ; Humans ; Male ; Phylogeny ; Pneumonia/*diagnosis/microbiology ; Pulmonary Disease, Chronic Obstructive/*diagnosis ; RNA, Ribosomal, 16S/chemistry/genetics/metabolism ; Republic of Korea ; Sequence Analysis, DNA

9

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Efficacy of the Measurement of 25-Hydroxyvitamin D2 and D3 Levels by Using PerkinElmer Liquid Chromatography-Tandem Mass Spectrometry Vitamin D Kit Compared With DiaSorin Radioimmunoassay Kit and Elecsys Vitamin D Total Assay.

Ho Seok KWAK ; Hee Jung CHUNG ; Dong Hee CHO ; Mi Hyun PARK ; Eun Suk KU ; Eun Jung PARK ; Han Jin OH

Annals of Laboratory Medicine.2015;35(2):263-265. doi:10.3343/alm.2015.35.2.263

No abstract available.
25-Hydroxyvitamin D 2/*blood ; Cholecalciferol/*blood ; Chromatography, High Pressure Liquid ; Humans ; *Radioimmunoassay ; Reagent Kits, Diagnostic ; *Tandem Mass Spectrometry

25-Hydroxyvitamin D 2/*blood ; Cholecalciferol/*blood ; Chromatography, High Pressure Liquid ; Humans ; *Radioimmunoassay ; Reagent Kits, Diagnostic ; *Tandem Mass Spectrometry

10

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De novo Leukemic Variant of Mast Cell Leukemia With KIT D816V.

Hae In BANG ; Rojin PARK ; Eun Su PARK ; In Ho CHOI ; Kyoung Ha KIM ; Jeong Won SHIN ; Tae Youn CHOI ; Kyungja HAN ; Jong Ho WON

Annals of Laboratory Medicine.2015;35(2):260-262. doi:10.3343/alm.2015.35.2.260

No abstract available.
Base Sequence ; Bone Marrow/pathology ; DNA Mutational Analysis ; Exons ; Female ; Humans ; Immunophenotyping ; Leukemia, Mast-Cell/*diagnosis/genetics ; Middle Aged ; Mutation ; Polymerase Chain Reaction ; Proto-Oncogene Proteins c-kit/*genetics

Base Sequence ; Bone Marrow/pathology ; DNA Mutational Analysis ; Exons ; Female ; Humans ; Immunophenotyping ; Leukemia, Mast-Cell/*diagnosis/genetics ; Middle Aged ; Mutation ; Polymerase Chain Reaction ; Proto-Oncogene Proteins c-kit/*genetics

Country

Republic of Korea

Publisher

Korean Society for Laboratory Medicine

ElectronicLinks

http://synapse.koreamed.org/LinkX.php?code=3039ALM

Editor-in-chief

HUR, Mina

E-mail

Abbreviation

Ann Lab Med

Vernacular Journal Title

ISSN

2234-3806

EISSN

2234-3814

Year Approved

2007

Current Indexing Status

Currently Indexed

Start Year

1981

Description

Annals of Laboratory Medicine (http://www.annlabmed.org) is published by the Korean Society for Laboratory Medicine (http://www.kslm.org/eng/). This journal publishes Original Articles, Case Reports, Brief Communications, Letters to the Editor, Review, Editorials, Corrections, and Correspondence about new and important subjects of laboratory medicine related to the etiology, diagnosis and treatment of diseases that are scientific, original, ethical and academically significant.

Previous Title

The Korean Journal of Laboratory Medicine
Korean Journal of Clinical Pathology

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