1.Molecular genetic characteristics of a family which coinheritance of rare-88 C>G (HBB:c.-138 C>G) β-thalassemia mutation with α-thalassemia and review of the literature.
Wei LI ; Li Ting CHEN ; Ying YU ; Jie WANG ; Cui Yun LI ; Tian E CAI ; Chun Jiao LU ; Dong Xue LI ; Xiu Juan TIAN
Chinese Journal of Preventive Medicine 2023;57(2):253-258
		                        		
		                        			
		                        			The molecular genetic characteristics of a family with rare -88 C>G (HBB: c.-138 C>G) β-thalassemia gene mutation were studied using cohort study. The cohort study was conducted from June to August 2022 by Prenatal Diagnosis Center of Sanya Women and Children's Hospital Managed by Shanghai Children's Medical Center. The phenotype and genotype were analyzed by hematological cytoanalyzer, automatic electrophoretic analysis system, and next-generation sequencing (NGS). And then, Sanger sequencing was used to verify the rare gene results. The results showed that the proband, her father, her uncle and her younger male cousin had discrete microcytosis (MCV 70.1 fl, 71.9 fl, 73.1 fl and 76.6 fl, respectively) and hypochromia (MCH 21.5 pg,22.0 pg,22.6 pg and 23.5 pg, respectively), elevated hemoglobin A2 level (5.3%, 5.4%, 5.4% and 5.5%, respectively), slightly elevated or normal fetal hemoglobin (Hb F), but no anemia. The proband was identified to have co-inherited ɑ-thalassemia (Hb Westmead gene heterozygous mutation, ɑwsɑ/ɑɑ) and β-thalassemia with a rare -88 C>G (HBB: c.-138 C>G) heterozygous mutation (β-88 C>G/βN). Her mother had the same α-thalassemia as the proband. Her father, her uncle and her younger male cousin had the same rare -88 C>G heterozygous mutations as the proband. While her grandmother and younger brother were not carrier of thalassemia. In conclusion, 4 cases of rare -88 C>G(HBB:c.-138 C>G) heterozygous mutation had been detected in a Chinese family. Carriers of this beta-thalassemia are clinically asymptomatic. This study enriches the knowledge of the thalassemia mutation spectrum in Chinese people and provides valuable information for genetic counseling, prenatal diagnosis, and prevention of thalassemia, providing a scientific basis for improving the quality of birth population and preventing birth defects.
		                        		
		                        		
		                        		
		                        			Female
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			alpha-Thalassemia/genetics*
		                        			;
		                        		
		                        			beta-Globins/genetics*
		                        			;
		                        		
		                        			beta-Thalassemia/diagnosis*
		                        			;
		                        		
		                        			China
		                        			;
		                        		
		                        			Cohort Studies
		                        			;
		                        		
		                        			Genotype
		                        			;
		                        		
		                        			Molecular Biology
		                        			;
		                        		
		                        			Mutation
		                        			
		                        		
		                        	
2.A case with α-thalassemia caused by novel start codon variant in conjunct with right deletion variant of α2-globin gene.
Yang CHEN ; Jie WANG ; Chan WANG ; Shiping CHEN ; Nyu FENG ; Haifang LIU ; Xiaoyan TANG ; Shufang ZHANG
Chinese Journal of Medical Genetics 2021;38(1):12-14
		                        		
		                        			OBJECTIVE:
		                        			The explore the genetic basis for a patient with microcytic hypochromic anemia and iron deficiency anemia.
		                        		
		                        			METHODS:
		                        			Common deletions and variants of the globin genes were detected by Gap-PCR and next generation sequencing (NGS). Suspected mutations were verified by Sanger sequencing.
		                        		
		                        			RESULTS:
		                        			Gap-PCR and NGS showed that the proband has carried a αα/-α 
		                        		
		                        			CONCLUSION
		                        			Patients with α HBA2 c.2T>A(p.Met1Lys) α/-α
		                        		
		                        		
		                        		
		                        			Anemia, Hypochromic/genetics*
		                        			;
		                        		
		                        			Codon, Initiator/genetics*
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Genetic Counseling
		                        			;
		                        		
		                        			Genetic Variation
		                        			;
		                        		
		                        			Genotype
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Mutation
		                        			;
		                        		
		                        			Pregnancy
		                        			;
		                        		
		                        			Prenatal Diagnosis
		                        			;
		                        		
		                        			alpha-Globins/genetics*
		                        			;
		                        		
		                        			alpha-Thalassemia/genetics*
		                        			
		                        		
		                        	
3.Preimplantation Genetic Diagnosis of α/β Complex Thalassemia by Next Generation Sequencing.
Tian-Wen HE ; Jian LU ; Chuang-Qi CHEN ; Wei-Ning ZHOU ; Jing-Shu LI ; Yun-Qiao DONG ; Li DU ; Ai-Hua YIN
Journal of Experimental Hematology 2021;29(4):1275-1279
		                        		
		                        			OBJECTIVE:
		                        			To explore the application value of next generation sequencing (NGS) in preimplantation genetic diagnosis of α/β complex thalassemia couple.
		                        		
		                        			METHODS:
		                        			The coding regions of α-globin genes (HBA1, HBA2) and β-globin gene (HBB) were selected as the target regions. The high-density and closely linked single nucleotide polymorphism (SNP) sites were selected as the genetic linkage markers in the upstream and downstream 2M regions of the gene. After NGS, the effective SNP sites were selected to construct the haplotype of the couple, and the risk chromosome of the mutation carried by the couple was determined. The NGS technology was used to sequence the variations of HBA1, HBA2 and HBB directly and construct haplotype linkage analysis for preimplantation genetic diagnosis.
		                        		
		                        			RESULTS:
		                        			Direct sequencing and haplotype linkage analysis of HBA1, HBA2 and HBB showed that two of the six blastocysts were α/β complex thalassemia, one was β-thalassemia heterozygote, two were α-thalassemias heterozygotes, and one was intermediate α-thalassemia. A well-developed embryo underwent preimplantation genetic diagnosis was implanted into the mother's uterus, and a healthy infant was born at term.
		                        		
		                        			CONCLUSION
		                        			Preimplantation genetic diagnosis can be carried out by NGS technology in α/β complex thalassemia couples, and abortion caused by aneuploid embryo selection can be avoided.
		                        		
		                        		
		                        		
		                        			Female
		                        			;
		                        		
		                        			High-Throughput Nucleotide Sequencing
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Mutation
		                        			;
		                        		
		                        			Pregnancy
		                        			;
		                        		
		                        			Preimplantation Diagnosis
		                        			;
		                        		
		                        			alpha-Thalassemia
		                        			;
		                        		
		                        			beta-Globins/genetics*
		                        			;
		                        		
		                        			beta-Thalassemia/genetics*
		                        			
		                        		
		                        	
4.Hematologic Phenotype and Genotype Analysis of Patients with Hemoglobin Variants.
Ye-Fei WANG ; Bei-Ying WU ; Wen-Quan XIA ; Ning CHEN ; Yi-Qun HU
Journal of Experimental Hematology 2021;29(4):1280-1288
		                        		
		                        			OBJECTIVE:
		                        			To study the hematologic and molecular features of 14 patients with hemoglobin (Hb) variants, so as to provide reference data for its laboratory screening.
		                        		
		                        			METHODS:
		                        			A total of 1 029 samples were screened by high performance liquid chromatography (HPLC) on the Bio-Rad VariantⅡHPLC system. GAP-PCR and reverse dot blot (RDB) were used to detect common mutation of α and β globin gene in Chinese. DNA sequencing for α and β globin gene was simultaneously performed in samples with abnormal spectrum peak and negative thalassemia gene.
		                        		
		                        			RESULTS:
		                        			In 1 029 samples, 10 types of structural Hb variants were detected in14 cases (1.36%), including 1 case of Hb E / β- thalassemia, 1 case of Hb E /α- thalassemia (HbH disease), 2 cases of HbG-Taipei, 2 cases of Hb Q-Thailand, 2 cases of Hb Youngstown, 1 case of Hb Guangzhou-Hangzhou, 1 case of Hb M-Boston, 1 case of Hb G-Siriraj, 1 case of Hb J-Baltimore, 1 case of Hb J-Sicilia and 1 case of Hb Tamano.
		                        		
		                        			CONCLUSION
		                        			The occurrence of abnormal structural Hb variants with many genotypes in Shanghai is unique. Except for Hb E, Hb Youngstown, and Hb M-Boston, other types of heterozygous are normal in phenotypes, and symptoms such as hemolysis and anemia often occur when other diseases are combined.
		                        		
		                        		
		                        		
		                        			China
		                        			;
		                        		
		                        			Genotype
		                        			;
		                        		
		                        			Hemoglobins, Abnormal/genetics*
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Phenotype
		                        			;
		                        		
		                        			alpha-Thalassemia
		                        			;
		                        		
		                        			beta-Globins/genetics*
		                        			
		                        		
		                        	
5.Analysis of beta-globin gene variants in Liuzhou area of Guangxi.
Lizhu CHEN ; Shiqiang LUO ; Ning TANG ; Qiuhua WANG ; Zehui XU ; Liuqun QIN ; Jingren WANG ; Qingyan ZHONG ; Jiaolian YA ; Xiaoli LIU ; Ren CAI ; Jun HUANG
Chinese Journal of Medical Genetics 2020;37(4):378-383
		                        		
		                        			OBJECTIVE:
		                        			To determine the composition and distribution of beta-thalassemia-associated genotypes in Liuzhou area of Guangxi, China.
		                        		
		                        			METHODS:
		                        			From January to December 2017, 13 847 individuals who came for premarital examination, maternity examination or health check were recruited with informed consent. The subjects were analyzed by reverse dot blotting (RDB) for 17 common beta-thalassemia-associated variants among the Chinese population. Individuals with inconsistent results by blood test, electrophoresis, and RDB were subjected to Sanger sequencing to detect rare variants of the beta globin gene.
		                        		
		                        			RESULTS:
		                        			In total 2098 individuals were found to harbor beta-thalassemia-associated variants, which included 2075 heterozygotes (98.90%), 12 compound heterozygotes (0.57%) and 11 homozygotes (0.52%). CD41-42 (48.43%) and CD17 (31.45%) were the most common variants. Three hundred and thirty eight-individuals were found to also carry heterozygous variants of the alpha globin gene, with the most common types being --SEA/aa, -a3.7/aa, aCSa/aa, -a4.2/aa. Through Sanger sequencing, rare genotypes such as beta-32/betaN, betaCD41-42/betaIVS-II-5 and betaCD30/betaN were detected.
		                        		
		                        			CONCLUSION
		                        			Liuzhou area has a high incidence of beta-thalassemia, but with a complex variant spectrum and clinical phenotypes different from other regions. Genetic counseling and prenatal diagnosis for the carrier population is crucial for the reduction of the related birth defects. Our result may provide valuable information for the prevention and control of beta-thalassemia in this area.
		                        		
		                        		
		                        		
		                        			China
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Genetic Counseling
		                        			;
		                        		
		                        			Genetic Variation
		                        			;
		                        		
		                        			Genotype
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Mutation
		                        			;
		                        		
		                        			Pregnancy
		                        			;
		                        		
		                        			Prenatal Diagnosis
		                        			;
		                        		
		                        			alpha-Globins
		                        			;
		                        		
		                        			genetics
		                        			;
		                        		
		                        			beta-Globins
		                        			;
		                        		
		                        			genetics
		                        			;
		                        		
		                        			beta-Thalassemia
		                        			;
		                        		
		                        			diagnosis
		                        			;
		                        		
		                        			genetics
		                        			
		                        		
		                        	
6.Rare thalassemia mutations among southern Chinese population.
Fen LIN ; Liye YANG ; Min LIN ; Xiangbian ZHENG ; Min LU ; Meilan QIU ; Liejun LI ; Longxu XIE
Chinese Journal of Medical Genetics 2017;34(6):792-796
OBJECTIVETo detect rare types of thalassemia mutations among southern Chinese population.
METHODSPeripheral blood samples from 327 patients from various regions of southern China were collected. The patients were suspected as rare-type thalassemia for their inconsistency between hematological phenotypes and results of routine mutation screening. The samples were further analyzed with GAP-PCR and DNA sequencing.
RESULTSOne hundred and eight cases were diagnosed as rare types of thalassemia. Among whom 10 rare α-globin gene mutations including --THAI, HKα, αααanti3.7, αααanti4.2, -α2.8, -α27.6, CD74 GAC>CAC (Hb Q-Thailand), CD30 (-GAG), CD31 AGG>AAG and CD118 (+TCA), and 12 rare β-globin gene mutations including CD37 TGG>TAG, CD39 CAG>TAG/CD39 CAG>TAG, β II-2 (-T), -90(C>T), -31(A>C), -88(C>T), CD7(-A), CD138(+T), CD89-93 (--AGTGAGCTGCACTG), CD54-58 (-TATGGGCAACCCT), Chinese G γ +(A γδβ)0 and Vietnamese HPFH (HPFH-6) were identified. -88(C>T) (HBB: c.-138C>T) and CD39 CAG>TAG (HBB: c.118C>T) were discovered for the first time in Chinese population. CD7(-A) (HBB: c.23delA) and CD138(+T) (HBB: c.416_417insT) were new types of β-globin gene mutations.
CONCLUSIONThe present study have enriched the mutation spectrum of thalassemia in southern China, which has provided necessary information for its diagnosis.
Humans ; Mutation ; Thalassemia ; genetics ; alpha-Globins ; genetics ; beta-Globins ; genetics
7.Analysis of clinical phenotype and genotype of unstable Hemoglobin Rush.
Shijun GE ; Biqing YANG ; Wei YI ; Kai HUANG ; Hongxian LIU ; Xiaoqin HUANG ; Jiayou CHU ; Zhaoqing YANG
Chinese Journal of Medical Genetics 2017;34(1):15-20
OBJECTIVETo analyze the hematological and genetic characteristics of unstable hemoglobin Rush (Hb Rush) and compound heterozygote of Hb Rush and thalassemia.
METHODSPeripheral blood samples and genomic DNA from three patients (including two ethnic Dai and one Han Chinese) with anemia of undetermined origin were collected. Hematological phenotypes of these patients were determined through red blood cell analysis and hemoglobin electrophoresis. Genotypes of alpha- and beta-globin genes, -158 XmnⅠ polymorphic site ofγ promoter region, and haplotypes of 7 polymorphic restriction sites in the beta-globin gene cluster were determined using PCR-based methods and DNA sequencing.
RESULTSAll patients have presented hypochromic microcytic anemia and hemoglobin fraction with significant increased measurement (30.5%-59.2%) in the region of fetal hemoglobin during alkaline medium electrophoresis. DNA analysis suggested that all patients have carried mutations leading to the unstable hemoglobin Rush (HBB codon 101, GAG>CAG, Glu>Gln). Two of them were compound heterozygotes of Hb Rush and thalassemia mutations of -α,CD17 and Hb E, respectively. Hb Rush mutation was associated with various haplotypes of the β-globin gene cluster. No significant association was found between increased abnormal hemoglobin fraction in the region of Hb F and the polymorphism ofγ promoter or large deletion of the beta-globin gene cluster.
CONCLUSIONThis study has confirmed the distribution of Hb Rush among various Chinese populations and is the third report of its kind. Hb Rush can result in increased measurement of hemoglobin fraction in the region of fetal hemoglobin (Hb F) during routine hemoglobin electrophoresis under alkaline condition. Hb Rush heterozygote alone can lead to hypochromic microcytic anemia and thalassemia-like phenotype. Prenatal diagnosis of Hb Rush is necessary for carriers.
Adult ; Base Sequence ; Blood Protein Electrophoresis ; methods ; Female ; Fetal Hemoglobin ; genetics ; metabolism ; Genotype ; Haplotypes ; Hemoglobins, Abnormal ; genetics ; metabolism ; Heterozygote ; Humans ; Infant ; Mutation ; Phenotype ; Polymorphism, Genetic ; Sequence Analysis, DNA ; methods ; Thalassemia ; blood ; diagnosis ; genetics ; Young Adult ; alpha-Globins ; genetics ; metabolism ; beta-Globins ; genetics ; metabolism
8.Gene Analysis of Thalassemia in Han and Dai Ethnic Childbearing-aged Population of Chinese Yunnan Province.
Jing HE ; Xiao-Hong ZENG ; Yong-Mei XU ; Jian PU ; Feng-Zhen ZHOU ; Chan-Chan JIN ; Jie SU ; Jin-Man ZHANG ; Hong CHEN ; Jie ZHANG ; Sun-Yun LI ; Yin-Hong ZHANG ; Bao-Sheng ZHU
Journal of Experimental Hematology 2016;24(1):150-156
OBJECTIVETo investigate the common mutation spectrum of α- and β-thalassemia in Yunnan childbearing-aged population.
METHODSThe common mutation types of α- or β-globin genes were detected by multiple Gap-PCR and the PCR-reversed dot blotting, and the unknown mutation types were determined by DNA sequencing in DNA samples of hypochromic microcytic anemia patients and carriers who were confirmed to be positive by serologic screaning, then the mutation types of globin in Yunnan population were analyzed statistically.
RESULTSA total of 40 kinds of mutation types were detected in 685 detected persons, among them the 3 commonest mutation types of α-globin genes were --(SEA)/αα (49.09%), -α(3.7)/αα (36.67%) and α(CS)α/αα (8.79%), the 3 commonest genetypes of β-globin gene were CD26(GAG>AAG)/N (43.78%), CD41-42(-CTTT)/N (20.1%) and CD17(AAG>TAG)/N (18.9%). There were 348 Han and 212 Dai ethnic persons in 685 cases, but their mutation of globin genes were different between these 2 ethnic groups. The results also showed that the gene mutation types were mostly concentrated in Dai ethnic individuals, since 28 of 38 detected α-β-thalassemia cases were Dai ethnic individuals.
CONCLUSIONThe mutation spectrums of α- and β-globin genes in Yunnan childbearing-aged population are diverse and different from that in other areas of China.
Alpha-Globulins ; genetics ; Anemia, Hypochromic ; ethnology ; genetics ; Asian Continental Ancestry Group ; China ; DNA Mutational Analysis ; Ethnic Groups ; genetics ; Genetic Testing ; Heterozygote ; Humans ; Mutation ; Polymerase Chain Reaction ; alpha-Thalassemia ; ethnology ; genetics ; beta-Globins ; genetics ; beta-Thalassemia ; ethnology ; genetics
9.Molecular and prenatal diagnosis of a rare mutation IVS1-116(A→G)of α2-globin gene.
Danqing QIN ; Jicheng WANG ; Lihua YU ; Tenglong YUAN ; Yanxia ZHANG ; Yixia WANG ; Mingyong LUO ; Juqing LIANG ; Li DU
Chinese Journal of Hematology 2015;36(9):791-792
		                        		
		                        		
		                        		
		                        			Female
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Mutation
		                        			;
		                        		
		                        			Pregnancy
		                        			;
		                        		
		                        			Prenatal Diagnosis
		                        			;
		                        		
		                        			alpha-Globins
		                        			;
		                        		
		                        			genetics
		                        			
		                        		
		                        	
10.Analysis of copy number variations in alpha-globin gene in the cases with combined increased levels of HbF with β thalassemia.
Siping LIU ; Lanlin SONG ; Li XIONG ; Ke WANG ; Hong SHEN ; Mei ZHONG
Chinese Journal of Medical Genetics 2015;32(4):515-519
OBJECTIVETo detect copy number changes of α-globin gene, and analyze molecular mechanism of the impacts of fetal hemoglobin (HbF) levels for α-globin gene copy numbers loss or increase.
METHODSA total of 15 cases with combined increased levels of fetal hemoglobin with β-thalassemia were collected. Firstly, three common α-thalassemia deletions were validated by Gap-PCR. Secondly, the largest deletions of the β-globin gene cluster were detected by multiplex ligation-dependent probe amplification (MLPA).
RESULTSAmong the 15 cases, there was 1 case with duplication of the α-globin gene cluster, 3 cases of SEA heterozygote deletion of the α-globin gene, 1 cases of α 3.7 deletion heterozygote of the α-globin gene, 1 case of alpha 4.2 deletion homozygote of the α-globin gene, 1 case of deletion homozygote in the like α-globin gene. A compound heterozygous for SEA and α 3.7 of the α-globin gene was also detected. However, 7 cases showed no copy numbers loss and increase of the the α-globin gene cluster.
CONCLUSIONAdditional α-globin gene can produce excessive α-chain, which can aggravate imbalance for α and β-chain, and cause clinical symptoms in patients with β-thalassemia. Yet, copy number loss or mutation in α-globin gene will cause a milder clinical phenotype.
Adult ; Asian Continental Ancestry Group ; genetics ; China ; DNA Copy Number Variations ; Female ; Fetal Hemoglobin ; metabolism ; Humans ; Infant ; Male ; Mutation ; Pedigree ; alpha-Globins ; genetics ; beta-Thalassemia ; genetics ; metabolism
            
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