1. Homeobox Gene Six3 is Required for the Differentiation of D2-Type Medium Spiny Neurons
Xiaolei SONG ; Haotian CHEN ; Zicong SHANG ; Heng DU ; Zhenmeiyu LI ; Yan WEN ; Guoping LIU ; Dashi QI ; Yan YOU ; Zhengang YANG ; Zhuangzhi ZHANG ; Zhejun XU
Neuroscience Bulletin 2021;37(7):985-998
Medium spiny neurons (MSNs) in the striatum, which can be divided into D1 and D2 MSNs, originate from the lateral ganglionic eminence (LGE). Previously, we reported that Six3 is a downstream target of Sp8/Sp9 in the transcriptional regulatory cascade of D2 MSN development and that conditionally knocking out Six3 leads to a severe loss of D2 MSNs. Here, we showed that Six3 mainly functions in D2 MSN precursor cells and gradually loses its function as D2 MSNs mature. Conditional deletion of Six3 had little effect on cell proliferation but blocked the differentiation of D2 MSN precursor cells. In addition, conditional overexpression of Six3 promoted the differentiation of precursor cells in the LGE. We measured an increase of apoptosis in the postnatal striatum of conditional Six3-knockout mice. This suggests that, in the absence of Six3, abnormally differentiated D2 MSNs are eliminated by programmed cell death. These results further identify Six3 as an important regulatory element during D2 MSN differentiation.
2. Decoding Cortical Glial Cell Development
Xiaosu LI ; Guoping LIU ; Lin YANG ; Zhenmeiyu LI ; Zhuangzhi ZHANG ; Zhejun XU ; Yuqun CAI ; Heng DU ; Zihao SU ; Ziwu WANG ; Yangyang DUAN ; Haotian CHEN ; Zicong SHANG ; Yan YOU ; Qi ZHANG ; Miao HE ; Zhengang YANG ; Bin CHEN
Neuroscience Bulletin 2021;37(4):440-460
Mouse cortical radial glial cells (RGCs) are primary neural stem cells that give rise to cortical oligodendrocytes, astrocytes, and olfactory bulb (OB) GABAergic interneurons in late embryogenesis. There are fundamental gaps in understanding how these diverse cell subtypes are generated. Here, by combining single-cell RNA-Seq with intersectional lineage analyses, we show that beginning at around E16.5, neocortical RGCs start to generate ASCL1
3.A Fluorescence Diffusion Optical Tomography System Based on Lattice Boltzmann Forward Model.
Xingxing CEN ; Zhuangzhi YAN ; Huandi WU
Chinese Journal of Medical Instrumentation 2020;44(1):1-6
Fluorescence Diffuse Optical Tomography (FDOT) is significant for biomedical applications, such as medical diagnostics, drug research. The fluorescence probe distribution in biological tissues can be quantitatively and non-invasively obtained via FDOT, achieving targets positioning and detection. In order to reduce the cost of FDOT, this study designs a FDOT system based on Lattice Boltzmann forward model. The system is used to realize two functions of light propagation simulation and FDOT reconstruction, and is composed of a parameter module, an algorithm module, a result display module and a data interaction module. In order to verify the effectiveness of the platform, this study carries out the light propagation simulation experiment and the FDOT reconstruction experiment, respectively comparing the Monte Carlo (MC) light propagation simulation results and the real position of the light source to be reconstructed. Experiments show that the proposed FDOT system has good reliability and has a high promotion value.
Algorithms
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Computer Simulation
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Monte Carlo Method
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Optical Devices
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Reproducibility of Results
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Tomography, Optical
4.A Method for Fluorescent Diffuse Optical Tomography Based on Lattice Boltzmann Forward Model on GPU Parallelization.
Huandi WU ; Zhuangzhi YAN ; Xingxing CEN
Chinese Journal of Medical Instrumentation 2020;44(2):95-100
Fluorescent Diffuse Optical Tomography (FDOT) is an emerging imaging method with great prospects in fields of biology and medicine. However, the current solutions to the forward problem in FDOT are time consuming, which greatly limit the application. We proposed a method for FDOT based on Lattice Boltzmann forward model on GPU to greatly improve the computational efficiency. The Lattice Boltzmann Method (LBM) was used to construct the optical transmission model. This method separated the LBM into collision, streaming and boundary processing processes on GPUs to perform the LBM efficiently, which were local computational and inefficient on CPU. The feasibility of the proposed method was verified by the numerical phantom and the physical phantom experiments. The experimental results showed that the proposed method achieved the best performance of a 118-fold speed up under the precondition of simulation accuracy, comparing to the diffusion equation implemented by Finite Element Method (FEM) on CPU. Thus, the LBM on the GPU may efficiently solve the forward problem in FDOT.
Computers
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Fluorescence
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Phantoms, Imaging
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Tomography, Optical/methods*
5. Efficacy and safety of domestic dasatinib as second-line treatment for chronic myeloid leukemia patients in the chronic phase
Yilin CHEN ; Long WANG ; Guolin YAN ; Zhuangzhi YANG ; Zhiping HUANG ; Youshan ZHANG ; Zhe ZHAO ; Chucheng WAN ; Ying BAO ; Hang XIANG ; Hua YIN ; Lifeng CHEN ; Yingyuan XIONG ; Li MENG ; Weiming LI
Chinese Journal of Hematology 2019;40(2):98-104
Objective:
To investigate the efficiency and safety of domestic tyrosine kinase inhibitor (TKI) dasatinib (Yinishu) as second-line treatment for patients with chronic myeloid leukemia in chronic phase (CML-CP).
Methods:
A retrospective analysis of clinical data of CML-CP patients who received domestic dasatinib as second-line treatment in the CML collaborative group hospitals of Hubei province from March 2016 to July 2018 was performed. The optimal response rate, the cumulative complete cytogenetic response (CCyR), the cumulative major molecular responses (MMR), progression free survival (PFS), event free survival (EFS) and adverse effects (AEs) of the patients were assessed at 3, 6 and 12 months of treatment.
Results:
A total of 83 CML-CP patients were enrolled in this study. The median follow-up time was 23 months. The optimal response rates at 3, 6 and 12 months in 83 CML-CP patients treated with dasatinib were 77.5% (54/71), 72.6% (61/75) and 60.7% (51/69), respectively. By the end of follow-up, the cumulative CCyR and MMR rates were 65.5% (55/80) and 57.1% (48/73), respectively. The median time to achieving CCyR and MMR was 3 months. During follow-up time, the PFS rate was 94.0% (79/83) and the EFS rate was 77.4% (65/83). The most common non-hematological AEs of dasatinib were edema (32.5%), rash itching (18.1%) and fatigue (13.3%). The common hematological AEs of dasatinib were thrombocytopenia (31.3%), leukopenia (19.3%) and anemia (6.0%).
Conclusion
Domestic dasatinib was effective and safe as the second-line treatment of CML-CP patients and it can be used as an option for CML-CP patients.
6.Hippocampus MRI Parallel Segmentation Using Three Dimensions Lattice Boltzmann Model with Prior Information.
Jizhe WANG ; Zhuangzhi YAN ; Junling WEN
Chinese Journal of Medical Instrumentation 2018;42(1):1-6
Getting volume change of hippocampus by segmenting on brain MRI is an important step in the diagnose of Alzheimer's disease and other brain disease. Three dimensional segmentation can make use of the correlation of image in gray and spatial position, so it has high accuracy. This paper proposes a novel three-dimensional lattice Boltzmann model combined with the surface evolution of deformable model and taking the prior information as an external force term to constrain the evolution of three dimensional surfaces. In order to solve the problem of high computational cost caused by 3D segmentation, the parallelization of the method is programmed on single GPU platform and dual GPU platform. Comparison experiments were set to test the accuracy of segmentation and computational efficiency between the novel LB method and another method by using 20 real AD patient's MRI from ADNI. In ensuring the accuracy of the segmentation, the time can be reduced to 12.76 s on single GPU platform, and 17.32 s on dual GPU platform, contrasting 132.43 s on CPU platform. It fully validates the characteristics of lattice Boltzmann method which can be highly parallelized.
Algorithms
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Hippocampus
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diagnostic imaging
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Humans
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Imaging, Three-Dimensional
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Magnetic Resonance Imaging
7.Simulation Platform of Photoacoustic Imaging Based on Finite Element and -space Pseudospectral Method.
Mengyu QI ; Zhuangzhi YAN ; Lili ZHAO
Chinese Journal of Medical Instrumentation 2018;42(6):413-416
Numerical simulation is a powerful technology for photoacoustic imaging (PAI) in both theory studies and practical applications. In this paper, a simulation platform for PAI was designed and implemented based on Matlab. The simulation platform utilized finite element method (FEM) and -space pseudospectral method to calculate the forward and inverse problem of PAI. And a graphical user interface (GUI) was realized. Structural design, work process and other operating details of the platform was also provided. By compared with theoretical temporal waveform of photoacoustic signal and reconstruction results of COMSOL, the validity and reliability was verified. And a reliable simulation tool was proposed for PAI.
Algorithms
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Computer Simulation
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Finite Element Analysis
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Photoacoustic Techniques
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Reproducibility of Results
8.Wearable Device for Non-Invasive Continuously Blood Pressure Monitoring.
Jiehui JIANG ; Jun XU ; Hucheng ZHOU ; Zhuangzhi YAN
Chinese Journal of Medical Instrumentation 2018;42(6):400-404
In aging society the development of non-invasive continuously blood pressure monitors which are suitable for homes, communities and nursing homes has a wide range of applications. This paper proposes a non-invasive continuously blood pressure monitoring based on wearable device which uses MSP430F5529 as the central processor. The design is divided into signal acquisition module, central control module, display module, power supply module and host computer module. The experimental results showed that DBP (375/390, 96.15%) and SBP estimation values (377/390, 96.67%) are in 95% confidence interval, which means our design passes Bland-Altman test with high accuracy and stability.
Blood Pressure
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Blood Pressure Determination
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Blood Pressure Monitors
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Electric Power Supplies
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Wearable Electronic Devices
9.Design of Intelligent Nursing Bed Based on Internet of Things + Technology.
Jiehui JIANG ; Po BAO ; Deqiang ZHAO ; Zhuangzhi YAN
Chinese Journal of Medical Instrumentation 2018;42(4):235-239
With the advent of social aging, the development of intelligent multifunctional nursing beds that are suitable for hospitals, nursing homes, homes and the like has a wide range of applications, this paper presents an intelligent nursing bed design based on Internet of Things technology. The design uses STM32F103 as the central processor. The design is divided into nursing bed module based on tri-fold structure, central control module based on data processing, weight scale module based on weight detection, power supply module based on system power supply and host computer module based on user operation. The design uses a closed control mode, greatly improving the bed control accuracy. Experimental tests showed that under the action of the intelligent control bed control system, the error rate of bed position information driven bedboard can be less than 2%, which has high accuracy and stability.
Beds
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Equipment Design
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Hospitals
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Internet
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Monitoring, Physiologic
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Nursing Homes
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Technology
10.Evaluation of Axillary Lymph Node Metastasis by Using Radiomics of Dual-modal Ultrasound Composed of Elastography and B-mode
Jingfeng SUO ; Qi ZHANG ; Wanying CHANG ; Jun SHI ; Zhuangzhi YAN ; Man CHEN
Chinese Journal of Medical Instrumentation 2017;41(5):313-316,326
Objective To explore the diagnostic value of quantitative radiomics features from dual-modal ultrasound composed of elastography and B-mode for axillary lymph node metastasis in breast cancer patients. Methods We retrospectively analyzed 161 axillary lymph nodes (69 benign and 92 metastatic) undergoing real-time elastography and B-mode ultrasound from 158 patients with breast cancer. We extracted a total of 428 features, consisting of morphologic features from B-mode, and intensity features and gray-level co-occurrence matrix features from the dual modalities,and the optimal subsut of features was selected through least absolute shrinkage and selection operator (Lasso) under the condition of leave-one-out cross validation. We used SVM for the classification of benign and metastatic nodes. Results The sensitivity, specificity, accuracy and Youden's index of the 35 radiomics features selected with Lasso were 86.96%, 85.51%, 86.34% and 72.46%, respectively. Conclusion The radiomics features from dual-modal ultrasound (elastography and B-mode) have demonstrated good performance for classification and have potential to be applied to clinical diagnosis of axillary lymph node metastasis.

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