1.Comparative profiling by data-independent acquisition mass spectrometry reveals featured plasma proteins in breast cancer: a pilot study
Kyung-Hwak YOON ; Hyosub CHU ; Hyeonji KIM ; Sunghyun HUH ; Eun-Kyu KIM ; Un-Beom KANG ; Hee-Chul SHIN
Annals of Surgical Treatment and Research 2024;106(4):195-202
		                        		
		                        			 Purpose:
		                        			Breast cancer is known to be influenced by genetic and environmental factors, and several susceptibility genes have been discovered. Still, the majority of genetic contributors remain unknown. We aimed to analyze the plasma proteome of breast cancer patients in comparison to healthy individuals to identify differences in protein expression profiles and discover novel biomarkers. 
		                        		
		                        			Methods:
		                        			This pilot study was conducted using bioresources from Seoul National University Bundang Hospital’s Human Bioresource Center. Serum samples from 10 breast cancer patients and 10 healthy controls were obtained. Liquid chromatography-mass spectrometry analysis was performed to identify differentially expressed proteins. 
		                        		
		                        			Results:
		                        			We identified 891 proteins; 805 were expressed in the breast cancer group and 882 in the control group. Gene set enrichment and differential expression analysis identified 30 upregulated and 100 downregulated proteins in breast cancer. Among these, 10 proteins were selected as potential biomarkers. Three proteins were upregulated in breast cancer patients, including cluster of differentiation 44, eukaryotic translation initiation factor 2-α kinase 3, and fibronectin 1. Seven proteins downregulated in breast cancer patients were also selected: glyceraldehyde-3-phosphate dehydrogenase, α-enolase, heat shock protein member 8, integrin‑linked kinase, tissue inhibitor of metalloproteinases-1, vasodilatorstimulated phosphoprotein, and 14-3-3 protein gamma. All proteins had been previously reported to be related to tumor development and progression. 
		                        		
		                        			Conclusion
		                        			The findings suggest that plasma proteome profiling can reveal potential diagnostic biomarkers for breast cancer and may contribute to early detection and personalized treatment strategies. A further validation study with a larger sample cohort of breast cancer patients is planned. 
		                        		
		                        		
		                        		
		                        	
2.Association Between the C4 Binding Protein Level and White Matter Integrity in Major Depressive Disorder
Jihoon PARK ; Youbin KANG ; Kyu-Man HAN ; Woo-Suk TAE ; Un-Beom KANG ; Hyosub CHU ; Byung-Joo HAM
Psychiatry Investigation 2022;19(9):703-711
		                        		
		                        			 Objective:
		                        			Considerable evidence suggests that neuroinflammation plays an important role in the pathophysiology of major depressive disorder (MDD). However, the relationship between serum C4 binding protein (C4BP) and white matter (WM) tract integrity in MDD has not been investigated. 
		                        		
		                        			Methods:
		                        			We obtained diffusion tensor images of 44 patients with MDD and 44 healthy controls and performed TRActs Constrained by UnderLying Anatomy (TRACULA) analysis to assess WM tract integrity. Serum C4-binding protein alpha chain (C4BPA) and C4- binding protein beta chain (C4BPB) levels were measured and in-between group comparisons were obtained. The correlation between serum C4BP levels and WM tract integrity was examined. 
		                        		
		                        			Results:
		                        			In comparison to healthy controls, both serum C4BPA and C4BPB were higher in MDD. Also, fractional anisotropy (FA) was increased in the left cingulum-angular bundle (CAB) in MDD, but not healthy controls (HCs). A significant correlation was found between serum C4BP and FA levels in the right cingulum-cingulate gyrus bundle (CCG) in MDD. 
		                        		
		                        			Conclusion
		                        			This study is the first to investigate the correlation between serum C4BP levels and WM tract integrity in MDD. We identified an increase in WM integrity in the left CAB region in MDD. Furthermore, serum C4BP levels were higher in MDD, and this finding correlated with increased WM integrity in the right CCG region. 
		                        		
		                        		
		                        		
		                        	
3.Erratum: A Validation Study of a Multiple Reaction Monitoring-Based Proteomic Assay to Diagnose Breast Cancer
Yumi KIM ; Un Beom KANG ; Sungsoo KIM ; Han Byoel LEE ; Hyeong Gon MOON ; Wonshik HAN ; Dong Young NOH
Journal of Breast Cancer 2020;23(1):113-114
		                        		
		                        			
		                        			 In the article, “A Validation Study of a Multiple Reaction Monitoring-Based Proteomic Assay to Diagnose Breast Cancer†in Volume 22(4), page 579-586 was error in the table. In Table 1, the value of pN0 was incorrectly listed as 29 (56.9) in ‘diagnosed as normal by biomarker’ and corrected to 39 (76.5). The authors apologize for any inconvenience that this may have caused. 
		                        		
		                        		
		                        		
		                        	
4.Seroprevalence of Hepatitis A Virus in Pediatric Patients with Hematologic Malignancies after Chemotherapy and Hematopoietic Cell Transplantation
Ja Un MOON ; A Luem HAN ; Eui Soo LEE ; Seong koo KIM ; Seung Beom HAN ; Jae Wook LEE ; Nack Gyun CHUNG ; Bin CHO ; Dae Chul JEONG ; Jin Han KANG
Infection and Chemotherapy 2019;51(2):183-187
		                        		
		                        			
		                        			 This retrospective study was performed to determine the seroprevalence of hepatitis A virus (HAV) in children and adolescents with hematologic malignancies after the completion of chemotherapy and hematopoietic cell transplantation (HCT). Of 97 enrolled patients, 60 (61.9%) were seropositive for HAV. The seroprevalences in patients undergoing chemotherapy and HCT were 60.3% (41/68) and 65.5% (19/29), respectively (P = 0.628). No significant factors associated with seropositivity for HAV after chemotherapy and HCT were identified. Anti-HAV tests and HAV re-vaccinations can be considered in children and adolescents with underlying hematologic malignancies after chemotherapy and HCT based on the anti-HAV results. 
		                        		
		                        		
		                        		
		                        	
5.A Validation Study of a Multiple Reaction Monitoring-Based Proteomic Assay to Diagnose Breast Cancer
Yumi KIM ; Un Beom KANG ; Sungsoo KIM ; Han Byoel LEE ; Hyeong Gon MOON ; Wonshik HAN ; Dong Young NOH
Journal of Breast Cancer 2019;22(4):579-586
		                        		
		                        			
		                        			
		                        		
		                        		
		                        		
		                        			Anesthesia
		                        			;
		                        		
		                        			Biomarkers
		                        			;
		                        		
		                        			Blood Proteins
		                        			;
		                        		
		                        			Breast Neoplasms
		                        			;
		                        		
		                        			Breast
		                        			;
		                        		
		                        			Carbonic Anhydrases
		                        			;
		                        		
		                        			Cohort Studies
		                        			;
		                        		
		                        			Colonic Neoplasms
		                        			;
		                        		
		                        			Diagnosis
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Lung
		                        			;
		                        		
		                        			Mammography
		                        			;
		                        		
		                        			Mass Screening
		                        			;
		                        		
		                        			Mass Spectrometry
		                        			;
		                        		
		                        			Neural Cell Adhesion Molecules
		                        			;
		                        		
		                        			Peptides
		                        			;
		                        		
		                        			Plasma
		                        			;
		                        		
		                        			Proteomics
		                        			;
		                        		
		                        			ROC Curve
		                        			;
		                        		
		                        			Sensitivity and Specificity
		                        			;
		                        		
		                        			Thyroid Gland
		                        			
		                        		
		                        	
6.The Korean Version of the Schizophrenia Cognition Rating Scale: Reliability and Validity.
Eun Chan KANG ; Sung Jin KIM ; Young Soo SEO ; Sung Soo JUNG ; Beom Joo SEO ; Jeoung Whan RYU ; Joo Cheol SHIM ; Jung Joon MOON ; Dong Wook JEON ; Kyoung Duck PARK ; Do Un JUNG
Psychiatry Investigation 2017;14(2):141-149
		                        		
		                        			
		                        			OBJECTIVE: This study's aim was to develop and standardize a Korean version (SCoRS-K) of the Schizophrenia Cognition Rating Scale (SCoRS), which is used to evaluate the degree of cognitive dysfunction affecting the everyday functioning of people with schizophrenia. METHODS: Eighty-four schizophrenia patients with stable symptoms who were receiving outpatient treatment and rehabilitation therapy, and 29 demographically matched non-patient controls, participated in the study. Demographic data were collected, and clinical symptoms, cognitive function, and social function were evaluated to verify SCoRS-K's reliability and validity. Clinical symptoms were evaluated using the Positive and Negative Syndrome Scale and the Clinical Global Impression-Schizophrenia Scale. Cognitive function was evaluated using a short form of the Korean Wechsler Adult Intelligence Scale and the Wisconsin Card Sorting Test (WCST). Social function was evaluated using the Social and Occupational Functioning Assessment Scale, the Schizophrenia Quality of Life Scale, and the Social Functioning Scale. RESULTS: Data analysis demonstrated SCoRS-K's statistically significant reliability and validity. SCoRS-K has high internal consistency (Cronbach's alpha; patient 0.941, informant 0.905, interviewer 0.964); test-retest reliability [patient 0.428 (p=0.003), informant 0.502 (p<0.001), interviewer 0.602 (p<0.001); and global rating 0.642 (p<0.001)]. The mean scores of subjects were significantly higher than those of the controls (p<0.001), demonstrating SCoRS-K's discriminant validity. Significant correlations between the total scores and global rating score of SCoRS-K and those of the scales and tests listed above (except WCST) support SCoRS-K's concurrent validity. CONCLUSION: SCoRS-K is a useful instrument for evaluating the degree of cognitive dysfunction in Korean schizophrenia patients.
		                        		
		                        		
		                        		
		                        			Adult
		                        			;
		                        		
		                        			Cognition*
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Intelligence
		                        			;
		                        		
		                        			Neurobehavioral Manifestations
		                        			;
		                        		
		                        			Outpatients
		                        			;
		                        		
		                        			Quality of Life
		                        			;
		                        		
		                        			Rehabilitation
		                        			;
		                        		
		                        			Reproducibility of Results*
		                        			;
		                        		
		                        			Schizophrenia*
		                        			;
		                        		
		                        			Statistics as Topic
		                        			;
		                        		
		                        			Weights and Measures
		                        			;
		                        		
		                        			Wisconsin
		                        			
		                        		
		                        	
7.Comparative Effects of Non-Thermal Atmospheric Pressure Plasma on Migration and Invasion in Oral Squamous Cell Cancer, by Gas Type.
Sung Un KANG ; Seong Jin SEO ; Yeon Soo KIM ; Yoo Seob SHIN ; Yoon Woo KOH ; Chang Min LEE ; Sang Sik YANG ; Jong Soo LEE ; Eunpyo MOON ; Hami KANG ; Jeong Beom RYEO ; Yuijina LEE ; Chul Ho KIM
Yonsei Medical Journal 2017;58(2):272-281
		                        		
		                        			
		                        			PURPOSE: The fourth state of matter, plasma is known as an ionized gas with electrons, radicals and ions. The use of non-thermal plasma (NTP) in cancer research became possible because of the progresses in plasma medicine. Previous studies on the potential NTP-mediated cancer therapy have mainly concentrated on cancer cell apoptosis. In the present study, we compared the inhibitory effect of NTP on cell migration and invasion in the oral squamous cancer cell lines. MATERIALS AND METHODS: We used oral squamous cancer cell lines (SCC1483, MSKQLL1) and different gases (N₂, He, and Ar). To investigate the mechanism of plasma treatment, using different gases (N₂, He, and Ar) which induces anti-migration and anti-invasion properties, we performed wound healing assay, invasion assay and gelatin zymography. RESULTS: The results showed that NTP inhibits cancer cell migration and invasion of oral squamous cancer cell. In addition, focal adhesion kinase expression and matrix metalloproteinase-2/9 activity were also inhibited. CONCLUSION: The suppression of cancer cell invasion by NTP varied depending on the type of gas. Comparison of the three gases revealed that N₂ NTP inhibited cell migration and invasion most potently via decreased expression of focal adhesion kinase and matrix metalloproteinase activity.
		                        		
		                        		
		                        		
		                        			Apoptosis
		                        			;
		                        		
		                        			Cell Line
		                        			;
		                        		
		                        			Cell Movement
		                        			;
		                        		
		                        			Epithelial Cells*
		                        			;
		                        		
		                        			Focal Adhesion Protein-Tyrosine Kinases
		                        			;
		                        		
		                        			Gases
		                        			;
		                        		
		                        			Gelatin
		                        			;
		                        		
		                        			Ions
		                        			;
		                        		
		                        			Neoplasms, Squamous Cell*
		                        			;
		                        		
		                        			Paxillin
		                        			;
		                        		
		                        			Plasma
		                        			;
		                        		
		                        			Plasma Gases*
		                        			;
		                        		
		                        			Wound Healing
		                        			
		                        		
		                        	
8.The Relationship between Language Ability and Cognitive Function in Patients with Schizophrenia.
Sung Jin KIM ; Joo Cheol SHIM ; Bo Geum KONG ; Je Wook KANG ; Jung Joon MOON ; Dong Wook JEON ; Sung Soo JUNG ; Beom Joo SEO ; Do Un JUNG
Clinical Psychopharmacology and Neuroscience 2015;13(3):288-295
		                        		
		                        			
		                        			OBJECTIVE: Cognitive dysfunction is common in people with schizophrenia, and language disability is one of the most notable cognitive deficits. This study assessed the use and comprehension ability of the Korean language in patients with schizophrenia and the correlations between language ability and cognitive function. METHODS: Eighty-six patients with schizophrenia and a group of 29 healthy controls were recruited. We assessed both clinical symptoms and cognitive functions including Korean language ability. For clinical symptoms, the Positive and Negative Syndrome Scale, Clinical Global Impression-Schizophrenia Scale, and Social and Occupational Functioning Assessment Scale were used. For the Korean language ability assessment, a portion of the Korean Broadcasting System (KBS) Korean Language Test was used. The Short-form of Korean-Wechsler Adult Intelligence Scale, the Korean version of the University of California San Diego (UCSD) Performance-based Skills Assessment (K-UPSA), and the Wisconsin Card Sorting Test (WCST) were used to assess cognitive functions. RESULTS: Schizophrenic patients had significantly lower scores in the language and cognitive function tests both in the total and subscale scores. Various clinical scores had negative correlations with reading comprehension ability of the KBS Korean Language Test. The WCST and a part of the K-UPSA had positive correlations with multiple domains of the language test. CONCLUSION: A significant difference was found between schizophrenic patients and controls in language ability. Correlations between Korean language ability and several clinical symptoms and cognitive functions were demonstrated in patients with schizophrenia. Tests of cognitive function had positive correlations with different aspects of language ability.
		                        		
		                        		
		                        		
		                        			Adult
		                        			;
		                        		
		                        			California
		                        			;
		                        		
		                        			Cognition
		                        			;
		                        		
		                        			Comprehension
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Intelligence
		                        			;
		                        		
		                        			Language Tests
		                        			;
		                        		
		                        			Language*
		                        			;
		                        		
		                        			Schizophrenia*
		                        			;
		                        		
		                        			Wisconsin
		                        			
		                        		
		                        	
9.Comparative profiling of plasma proteome from breast cancer patients reveals thrombospondin-1 and BRWD3 as serological biomarkers.
Eui Jin SUH ; Mohammad Humayun KABIR ; Un Beom KANG ; Jong Won LEE ; Jonghan YU ; Dong Young NOH ; Cheolju LEE
Experimental & Molecular Medicine 2012;44(1):36-44
		                        		
		                        			
		                        			Breast cancer is the most common cancer in women worldwide. It is necessary to identify biomarkers for early detection, to make accurate prognoses, and to monitor for any recurrence of the cancer. In order to identify potential breast cancer biomarkers, we analyzed the plasma samples of women diagnosed with breast cancer and age-matched normal healthy women by mTRAQ-based stable isotope-labeling mass spectrometry. We identified and quantified 204 proteins including thrombospondin-1 (THBS1) and bromodomain and WD repeat-containing protein 3 (BRWD3) which were increased by more than 5-fold in breast cancer plasma. The plasma levels of the two proteins were evaluated by Western blot assay to confirm for their diagnostic value as serum markers. A 1.8-fold increase in BRWD3 was observed while comparing the plasma levels of breast cancer patients (n = 54) with age-matched normal healthy controls (n = 30), and the area under the receiver operating characteristic curve (AUC) was 0.917. THBS1 was detected in pooled breast cancer plasma at the ratio similar to mTRAQ ratio (> 5-fold). The AUC value for THBS1 was 0.875. The increase of THBS1 was more prominent in estrogen receptor negative and progesterone receptor negative patients than receptor-positive patients. Our results are evidence of the diagnostic value of THBS1 in detecting breast cancer. Based on our findings, we suggest a proteomic method for protein identification and quantification lead to effective biomarker discovery.
		                        		
		                        		
		                        		
		                        			Adult
		                        			;
		                        		
		                        			Breast Neoplasms/*diagnosis/genetics/pathology
		                        			;
		                        		
		                        			Early Detection of Cancer
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Gene Expression Profiling
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Middle Aged
		                        			;
		                        		
		                        			Pathology, Molecular/methods
		                        			;
		                        		
		                        			Predictive Value of Tests
		                        			;
		                        		
		                        			Prognosis
		                        			;
		                        		
		                        			*Proteomics
		                        			;
		                        		
		                        			Thrombospondin 1/*blood
		                        			;
		                        		
		                        			Transcription Factors/*blood
		                        			;
		                        		
		                        			Tumor Markers, Biological/*blood
		                        			
		                        		
		                        	
10.Investigation on the Hemodialysis System Contaminated with Ralstonia Pickettii.
Jae Hyun JEON ; Ja Hyun KANG ; Mi Young PARK ; Wan Beom PARK ; Kyoung Un PARK ; Eun Hwa CHOI ; Dong Wan CHAE ; Hong Bin KIM
Korean Journal of Nosocomial Infection Control 2009;14(1):43-50
		                        		
		                        			
		                        			INTRODUCTION: To prevent hemodialysis-related infections, it is important to maintain hemodialysis system without microbial contamination. In May 2003, routine surveillance showed that dialysis water from dialysis port was contaminated with bacteria. To identify the causes of the contamination, we conducted an investigation as follows. METHODS: Patients undergoing dialysis were carefully monitored to see whether evidences of pyrogenic reactions or infections were present. Factors that could have influence on bacterial contamination in hemodialysis systems were thoroughly examined. In addition, microbiologic surveillances were done 7 times in 1 month. RESULTS: Although pyrogenic reactions or bacteremia did not occur, R. pickettii was repeatedly isolated above the Association for the Advancement of Medical Instrumentation (AAMI) standards from almost all dialysis units. Bacterial counts of specimens were higher in the proximal part of the water supply tube than the other parts in all dialysis machines. The colony count of R. pickettii exceeded the maximum level of technical limit in the specimens collected from the dialysis machines in the early morning after intermission of 48 hours. The structure of the supply tube was suspected as the origin of the colonization because stagnant water is a reservoir for bacterial multiplication. After remodeling the structure of the water supply tube, neither R. pickettii nor any other bacteria were isolated. CONCLUSION: Our investigation successfully identified the source of R. pickettii contamination of reverse osmosis water. Appropriate corrective measures for water distribution systems of hemodialysis center could prevent outbreak of dialysis-associated illnesses.
		                        		
		                        		
		                        		
		                        			Bacteremia
		                        			;
		                        		
		                        			Bacteria
		                        			;
		                        		
		                        			Bacterial Load
		                        			;
		                        		
		                        			Colon
		                        			;
		                        		
		                        			Dialysis
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Osmosis
		                        			;
		                        		
		                        			Ralstonia
		                        			;
		                        		
		                        			Ralstonia pickettii
		                        			;
		                        		
		                        			Renal Dialysis
		                        			;
		                        		
		                        			Water
		                        			;
		                        		
		                        			Water Supply
		                        			
		                        		
		                        	
            
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