1.Genetic analysis of a child with Charlevoix-Saguenay spastic ataxia due to variant of SACS gene.
Huan LUO ; Xiaolu CHEN ; Xueyi RAO ; Yajun SHEN ; Jinfeng LIU ; Zuozhen YANG ; Jing GAN
Chinese Journal of Medical Genetics 2023;40(5):558-562
		                        		
		                        			OBJECTIVE:
		                        			To explore the clinical feature and genetic variant of a child with autosomal recessive Charlevoix-Saguenay type spastic ataxia (ARSACS).
		                        		
		                        			METHODS:
		                        			Clinical data of a child who was admitted to the West China Second Hospital of Sichuan University on April 30, 2021 was collected. Whole exome sequencing (WES) was carried out for the child and his parents. Candidate variants were verified by Sanger sequencing and bioinformatic analysis based on the guidelines from the American College of Medical Genetics and Genomics (ACMG).
		                        		
		                        			RESULTS:
		                        			The child, a 3-year-and-3-month-old female, had a complain of "walking instability for over a year". Physical and laboratory examination revealed progressive and aggravated gait instability, increased muscle tone of the right limbs, peripheral neuropathy of the lower limbs, and thickening of retinal nerve fiber layer. The results of WES revealed that she has harbored a maternally derived heterozygous deletion of exons 1 to 10 of the SACS gene, in addition with a de novo heterozygous c.3328dupA variant in exon 10 of the SACS gene. Based on the ACMG guidelines, the exons 1-10 deletion was rated as likely pathogenic (PVS1+PM2_Supporting), and the c.3328dupA was rated as a pathogenic variant (PVS1_Strong+PS2+PM2_Supporting). Neither variant was recorded in the human population databases.
		                        		
		                        			CONCLUSION
		                        			The c.3328dupA variant and the deletion of exons 1-10 of the SACS gene probably underlay the ARSACS in this patient.
		                        		
		                        		
		                        		
		                        			Female
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Heat-Shock Proteins/genetics*
		                        			;
		                        		
		                        			Muscle Spasticity/genetics*
		                        			;
		                        		
		                        			Mutation
		                        			;
		                        		
		                        			Spinocerebellar Ataxias/pathology*
		                        			;
		                        		
		                        			Child, Preschool
		                        			
		                        		
		                        	
2.Diagnosis of a patient with Spinocerebellar ataxia type 29 due to a novel variant of ITPR1 gene.
Ya Nan ZHI ; Jiao LIU ; Cheng ZHEN ; Juan LI ; Fangna WANG ; Yan LUO ; Pingping ZHANG ; Mingming ZHANG ; Yali LI
Chinese Journal of Medical Genetics 2023;40(1):76-80
		                        		
		                        			OBJECTIVE:
		                        			To explore the clinical and genetic characteristics of a child with spinocerebellar ataxia type 29 (SCA29) due to novel variant of the inositol 1,4,5-trisphosphate receptor type 1 (ITPR1) gene.
		                        		
		                        			METHODS:
		                        			The child was subjected high-throughput sequencing, and candidate variant was verified by Sanger sequencing of his family members.
		                        		
		                        			RESULTS:
		                        			The child was found to harbor a c.800C>T (p.T267M) variant of the ITPR1 gene, which was not found in his parents and their fetus. The variant has occurred in a hotspot of the ITPR1 gene variants and was unreported before in China. Based on his clinical and genetic characteristics, the child was diagnosed with SCA29.
		                        		
		                        			CONCLUSION
		                        			The novel heterozygous c.800C>T (p.T267M) of the ITPR1 gene probably underlay the SCA29 in this child.
		                        		
		                        		
		                        		
		                        			Child
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Family
		                        			;
		                        		
		                        			Inositol 1,4,5-Trisphosphate Receptors/genetics*
		                        			;
		                        		
		                        			Mutation
		                        			;
		                        		
		                        			Spinocerebellar Ataxias/genetics*
		                        			;
		                        		
		                        			Spinocerebellar Degenerations
		                        			
		                        		
		                        	
3.Research advance on the pathogenesis of autosomal recessive spastic ataxia of Charlevoix-Saguenay.
Rong FU ; Man DING ; Zuneng LU
Chinese Journal of Medical Genetics 2023;40(1):121-124
		                        		
		                        			
		                        			Autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS) is a rare and early-onset neurodegenerative disease caused by variants of the SACS gene which maps to chromosome 13q11 and encodes sacsin protein. Sacsin is highly expressed in large motor neurons, in particular cerebellar Purkinje cells. This article has provided a review for the structure and function of sacsin protein and the mechanisms underlying abnormalities of sacsin in ARSACS disease.
		                        		
		                        		
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Spinocerebellar Ataxias/pathology*
		                        			;
		                        		
		                        			Ataxia/genetics*
		                        			;
		                        		
		                        			Muscle Spasticity/genetics*
		                        			
		                        		
		                        	
4.Investigation on the growth factor regulatory network of dermal fibroblasts in mouse full-thickness skin defect wounds based on single-cell RNA sequencing.
Li Xiang SUN ; Shuai WU ; Xiao Wei ZHANG ; Wen Jie LIU ; Ling Juan ZHANG
Chinese Journal of Burns 2022;38(7):629-639
		                        		
		                        			
		                        			Objective: To explore the heterogeneity and growth factor regulatory network of dermal fibroblasts (dFbs) in mouse full-thickness skin defect wounds based on single-cell RNA sequencing. Methods: The experimental research methods were adopted. The normal skin tissue from 5 healthy 8-week-old male C57BL/6 mice (the same mouse age, sex, and strain below) was harvested, and the wound tissue of another 5 mice with full-thickness skin defect on the back was harvested on post injury day (PID) 7. The cell suspension was obtained by digesting the tissue with collagenase D and DNase Ⅰ, sequencing library was constructed using 10x Genomics platform, and single-cell RNA sequencing was performed by Illumina Novaseq6000 sequencer. The gene expression matrices of cells in the two kinds of tissue were obtained by analysis of Seurat 3.0 program of software R4.1.1, and two-dimensional tSNE plots classified by cell group, cell source, and gene labeling of major cells in skin were used for visual display. According to the existing literature and the CellMarker database searching, the expression of marker genes in the gene expression matrices of cells in the two kinds of tissue was analyzed, and each cell group was numbered and defined. The gene expression matrices and cell clustering information were introduced into CellChat 1.1.3 program of software R4.1.1 to analyze the intercellular communication in the two kinds of tissue and the intercellular communication involving vascular endothelial growth factor (VEGF), platelet-derived growth factor (PDGF), epidermal growth factor (EGF), and fibroblast growth factor (FGF) signal pathways in the wound tissue, the relative contribution of each pair of FGF subtypes and FGF receptor (FGFR) subtypes (hereinafter referred to as FGF ligand receptor pairs) to FGF signal network in the two kinds of tissue, and the intercellular communication in the signal pathway of FGF ligand receptor pairs with the top 2 relative contributions in the two kinds of tissue. The normal skin tissue from one healthy mouse was harvested, and the wound tissue of one mouse with full-thickness skin defect on the back was harvested on PID 7. The multiple immunofluorescence staining was performed to detect the expression and distribution of FGF7 protein and its co-localized expression with dipeptidyl peptidase 4 (DPP4), stem cell antigen 1 (SCA1), smooth muscle actin (SMA), and PDGF receptor α (PDGFRα) protein. Results: Both the normal skin tissue of healthy mice and the wound tissue of full-thickness skin defected mice on PID 7 contained 25 cell groups, but the numbers of cells in each cell group between the two kinds of tissue were different. Genes PDGFRα, platelet endothelial cell adhesion molecule 1, lymphatic endothelial hyaluronic acid receptor 1, receptor protein tyrosine phosphatase C, keratin 10, and keratin 79 all had distinct distributions on two-dimensional tSNE plots, indicating specific cell groups respectively. The 25 cell groups were numbered by C0-C24 and divided into 9 dFb subgroups and 16 non-dFb groups. dFb subgroups included C0 as interstitial progenitor cells, C5 as adipose precursor cells, and C13 as contractile muscle cells related fibroblasts, etc. Non-dFb group included C3 as neutrophils, C8 as T cells, and C18 as erythrocytes, etc. Compared with that of the normal skin tissue of healthy mice, the intercellular communication in the wound tissue of full-thickness skin defected mice on PID 7 was more and denser, and the top 3 cell groups in intercellular communication intensity were dFb subgroups C0, C1, and C2, of which all communicated with other cell groups in the wound tissue. In the wound tissue of full-thickness skin defected mice on PID 7, VEGF signals were mainly sent by the dFb subgroup C0 and received by vascular related cell groups C19 and C21, PDGF signals were mainly sent by peripheral cells C14 and received by multiple dFb subgroups, EGF signals were mainly sent by keratinocyte subgroups C9 and C11 and received by the dFb subgroup C0, and the main sender and receiver of FGF signals were the dFb subgroup C6. In the relative contribution rank of FGF ligand receptor pairs to FGF signal network in the normal skin tissue of healthy mice and the wound tissue of full-thickness skin defected mice on PID 7, FGF7-FGFR1 was the top 1, and FGF7-FGFR2 or FGF10-FGFR1 was in the second place, respectively; compared with those in the normal skin tissue, there was more intercellular communication in FGF7-FGFR1 signal pathway, while the intercellular communication in FGF7-FGFR2 and FGF10-FGFR1 signal pathways decreased slightly or did not change significantly in the wound tissue; the intercellular communication in FGF7-FGFR1 signal pathway in the wound tissue was stronger than that in FGF7-FGFR2 or FGF10-FGFR1 signal pathway; in the two kinds of tissue, FGF7 signal was mainly sent by dFb subgroups C0, C1, and C2, and received by dFb subgroups C6 and C7. Compared with that in the normal skin tissue of healthy mouse, the expression of FGF7 protein was higher in the wound tissue of full-thickness skin defected mouse on PID 7; in the normal skin tissue, FGF7 protein was mainly expressed in the skin interstitium and also expressed in the white adipose tissue near the dermis layer; in the two kinds of tissue, FGF7 protein was co-localized with DPP4 and SCA1 proteins and expressed in the skin interstitium, co-localized with PDGFRα protein and expressed in dFbs, but was not co-localized with SMA protein, with more co-localized expression of FGF7 in the wound tissue than that in the normal skin tissue. Conclusions: In the process of wound healing of mouse full-thickness skin defect wound, dFbs are highly heterogeneous, act as potential major secretory or receiving cell populations of a variety of growth factors, and have a close and complex relationship with the growth factor signal pathways. FGF7-FGFR1 signal pathway is the main FGF signal pathway in the process of wound healing, which targets and regulates multiple dFb subgroups.
		                        		
		                        		
		                        		
		                        			Animals
		                        			;
		                        		
		                        			Dipeptidyl Peptidase 4
		                        			;
		                        		
		                        			Epidermal Growth Factor
		                        			;
		                        		
		                        			Fibroblasts
		                        			;
		                        		
		                        			Imidazoles
		                        			;
		                        		
		                        			Ligands
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Mice
		                        			;
		                        		
		                        			Mice, Inbred C57BL
		                        			;
		                        		
		                        			Receptor, Platelet-Derived Growth Factor alpha
		                        			;
		                        		
		                        			Sequence Analysis, RNA
		                        			;
		                        		
		                        			Skin Abnormalities
		                        			;
		                        		
		                        			Soft Tissue Injuries
		                        			;
		                        		
		                        			Spinocerebellar Ataxias
		                        			;
		                        		
		                        			Sulfonamides
		                        			;
		                        		
		                        			Thiophenes
		                        			;
		                        		
		                        			Vascular Endothelial Growth Factor A
		                        			
		                        		
		                        	
5.Detection and analysis of dynamic variant in a pedigree affected with spinocerebellar ataxia type 3.
Chen CHEN ; Xuechao ZHAO ; Xiangdong KONG
Chinese Journal of Medical Genetics 2020;37(12):1364-1367
		                        		
		                        			OBJECTIVE:
		                        			To analyze the dynamic variant and clinical subtype of a pedigree affected with spinocerebellar ataxia (SCA) by using fluorescent-labeled primer combined with capillary electrophoresis.
		                        		
		                        			METHODS:
		                        			Genomic DNA was extracted from 8 members including 6 patients and 2 healthy individuals from the pedigree. Six pairs of fluorescent-labeled primers were designed to screen pathological variants in association with common subtypes of SCA including SCA1, SCA2, SCA3, SCA6, SCA12 and SCA17.The PCR products were detected by capillary electrophoresis.
		                        		
		                        			RESULTS:
		                        			The number of CAG repeats in the SCA3 gene of the proband were determined as 8 and 70, exceeded the normal range(12 to 40), which suggested a diagnosis of SCA3. The other five patients were all detected with abnormal CAG repeats in the SCA3 gene, while the two healthy individuals were determined to be within the normal range.
		                        		
		                        			CONCLUSION
		                        			The abnormal expansion of CAG repeats in the SCA3 gene probably underlay the pathogenesis of the disease in this pedigree. Combined fluorescent-labeled primers PCR and capillary electrophoresis can detect dynamic variants among SCA patients with efficiency and accuracy.
		                        		
		                        		
		                        		
		                        			Ataxin-3/genetics*
		                        			;
		                        		
		                        			Genetic Variation
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Machado-Joseph Disease/genetics*
		                        			;
		                        		
		                        			Pedigree
		                        			;
		                        		
		                        			Repressor Proteins/genetics*
		                        			;
		                        		
		                        			Trinucleotide Repeats/genetics*
		                        			
		                        		
		                        	
6.Expert consensus on the management strategy of patients with hereditary ataxia during prevention and control of novel coronavirus pneumonia epidemic.
SPECIALIZED COMMITTEE OF NEUROGENETICS NEUROPHYSICIAN BRANCH OF CHINESE MEDICAL DOCTOR ASSOCIATION ; Hong JIANG ; Beisha TANG
Chinese Journal of Medical Genetics 2020;37(4):359-366
		                        		
		                        			
		                        			Since December 2019, a series of highly infectious cases of unexplained pneumonia have been discovered in Wuhan, Hubei Province, which have been confirmed as '2019 corona virus disease' caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). SARS-CoV-2 virus can invade many human systems including the lungs. Patients with central nervous system involvement may show a series of neurological symptoms, which is easy to be misdiagnosed and neglected, thereby increasing the risk of SARS-CoV-2 transmission. Hereditary ataxia is a large group of neurodegenerative diseases with great clinical and genetic heterogeneity and high mortality and disability. In view of the seriousness of the COVID-19 epidemic, a series of prevention and control measures adopted by the government have restricted the follow-up, diagnosis and treatment of patients by the hospitals, which has a great impact on their mental and physical health. In order to standardize the management of patients during the prevention and control of COVID-19 epidemic, the Specialized Committee of Neurogenetics of the Neurophysician Branch of Chinese Medical Doctor Association has formulated this consensus, with an aim to help patients to overcome the difficulties and pass the epidemic prevention period safely.
		                        		
		                        		
		                        		
		                        			Betacoronavirus
		                        			;
		                        		
		                        			China
		                        			;
		                        		
		                        			epidemiology
		                        			;
		                        		
		                        			Consensus
		                        			;
		                        		
		                        			Coronavirus Infections
		                        			;
		                        		
		                        			complications
		                        			;
		                        		
		                        			epidemiology
		                        			;
		                        		
		                        			Epidemics
		                        			;
		                        		
		                        			Health Status
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Mental Health
		                        			;
		                        		
		                        			Nervous System Diseases
		                        			;
		                        		
		                        			virology
		                        			;
		                        		
		                        			Pandemics
		                        			;
		                        		
		                        			Pneumonia, Viral
		                        			;
		                        		
		                        			complications
		                        			;
		                        		
		                        			epidemiology
		                        			;
		                        		
		                        			Spinocerebellar Degenerations
		                        			;
		                        		
		                        			complications
		                        			;
		                        		
		                        			diagnosis
		                        			;
		                        		
		                        			prevention & control
		                        			;
		                        		
		                        			therapy
		                        			
		                        		
		                        	
7.Analysis of SACS mutation in a family affected with autosomal recessive spastic ataxia of Charlevoix-Saguenay.
Qian ZHANG ; Huanzheng LI ; Chong CHEN ; Zhaotang LUAN ; Xueqin XU ; Shaohua TANG
Chinese Journal of Medical Genetics 2019;36(3):217-220
		                        		
		                        			OBJECTIVE:
		                        			To carry out mutation analysis for a Chinese family affected with autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS).
		                        		
		                        			METHODS:
		                        			Whole exome sequencing (WES) was used to screen potential mutations within genomic DNA extracted from the proband. Suspected mutation was validated by combining clinical data and results of Sanger sequencing.
		                        		
		                        			RESULTS:
		                        			A homozygous deletional mutation c.3665_3675delGTGCTGTCTTA (p.S1222fs) was found in the proband, for which her parents were both heterozygous carriers.
		                        		
		                        			CONCLUSION
		                        			WES is capable of detecting mutation underlying this disorder and facilitating genetic counseling and prenatal diagnosis for the affected family. A novel pathogenic mutation of the SACS gene was discovered.
		                        		
		                        		
		                        		
		                        			Female
		                        			;
		                        		
		                        			Genes, Recessive
		                        			;
		                        		
		                        			Heat-Shock Proteins
		                        			;
		                        		
		                        			genetics
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Muscle Spasticity
		                        			;
		                        		
		                        			Mutation
		                        			;
		                        		
		                        			Spinocerebellar Ataxias
		                        			;
		                        		
		                        			congenital
		                        			
		                        		
		                        	
8.Assessment of Bone Mineral Density of Patients with Spinocerebellar Ataxia Type 3
Aline MS FARIAS ; Simone APPENZELLER ; Marcondes C FRANÇA ; Alberto RM MARTINEZ ; Elba E ETCHEBEHERE ; Thiago F SOUZA ; Allan O SANTOS
Journal of Movement Disorders 2019;12(1):43-46
		                        		
		                        			
		                        			OBJECTIVE: Machado-Joseph disease (MJD) is a spinocerebellar ataxia, and osteoporosis is a multifactor disease that may affect patients with neurologic conditions. The frequency of osteoporosis among MJD patients, however, has not been studied. The purpose of this study is to evaluate bone mineral density (BMD) and identify correlations between clinical factors and frequency of vertebral fractures in patients with MJD. METHODS: Clinical data, lumbar X-rays and BMD data were obtained in 30 patients with MJD. RESULTS: Ten patients (33.3%) showed low BMD in at least one of the sites studied based on Z-scores. The Z-score correlated directly with body mass index, and the femoral neck Z-score was inversely correlated with cytosine-adenine-guanine (CAG) expansion. There was no correlation between BMD and other clinical factors. Forty-three percent of the patients reported previous pathologic fractures. Five patients (16.7%) had at least one fracture detected by lumbar X-ray. CONCLUSION: Low BMD and fractures are frequent among MJD patients, and careful management of BMD may be beneficial for these patients.
		                        		
		                        		
		                        		
		                        			Body Mass Index
		                        			;
		                        		
		                        			Bone Density
		                        			;
		                        		
		                        			Femur Neck
		                        			;
		                        		
		                        			Fractures, Spontaneous
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Machado-Joseph Disease
		                        			;
		                        		
		                        			Osteoporosis
		                        			;
		                        		
		                        			Spinocerebellar Ataxias
		                        			
		                        		
		                        	
9.Autosomal Recessive Spastic Ataxia of Charlevoix-Saguenay
Jeong Bin BONG ; Seung Woo KIM ; Seung Tae LEE ; Jong Rak CHOI ; Ha Young SHIN
Journal of the Korean Neurological Association 2019;37(1):69-72
		                        		
		                        			
		                        			Autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS), which is caused by mutations in SACS gene, is a very rare neurodegenerative disorder characterized by the clinical triad of early onset cerebellar ataxia, pyramidal tract features, and sensorimotor polyneuropathy. Herein, we report a 35-year-old Korean male who presented with gait disturbance and lower extremity weakness. Neuroimaging and ophthalmologic evaluation revealed features consistent with ARSACS. Mutation in SACS gene was demonstrated in clinical exome sequence analysis and the patient was finally diagnosed as ARSACS.
		                        		
		                        		
		                        		
		                        			Adult
		                        			;
		                        		
		                        			Ataxia
		                        			;
		                        		
		                        			Cerebellar Ataxia
		                        			;
		                        		
		                        			Exome
		                        			;
		                        		
		                        			Gait
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Lower Extremity
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Muscle Spasticity
		                        			;
		                        		
		                        			Neurodegenerative Diseases
		                        			;
		                        		
		                        			Neuroimaging
		                        			;
		                        		
		                        			Polyneuropathies
		                        			;
		                        		
		                        			Pyramidal Tracts
		                        			;
		                        		
		                        			Sequence Analysis
		                        			;
		                        		
		                        			Spinocerebellar Degenerations
		                        			
		                        		
		                        	
10.Identification of Abnormal 51 CTA/CTG Expansion as Probably the Shortest Pathogenic Allele for Spinocerebellar Ataxia-8 in China.
Minjin WANG ; Shuo GUO ; Wencong YAO ; Jun WANG ; Jianxia TAO ; Yanbing ZHOU ; Binwu YING
Neuroscience Bulletin 2018;34(5):859-862
		                        		
		                        		
		                        		
		                        			Adult
		                        			;
		                        		
		                        			China
		                        			;
		                        		
		                        			DNA Repeat Expansion
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Middle Aged
		                        			;
		                        		
		                        			Pedigree
		                        			;
		                        		
		                        			RNA, Long Noncoding
		                        			;
		                        		
		                        			genetics
		                        			;
		                        		
		                        			Spinocerebellar Degenerations
		                        			;
		                        		
		                        			genetics
		                        			;
		                        		
		                        			physiopathology
		                        			
		                        		
		                        	
            
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