1.Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data
ChulHyoung PARK ; Seng Chan YOU ; Hokyun JEON ; Chang Won JEONG ; Jin Wook CHOI ; Rae Woong PARK
Yonsei Medical Journal 2022;63(S1):74-83
Purpose:
Digital Imaging and Communications in Medicine (DICOM), a standard file format for medical imaging data, contains metadata describing each file. However, metadata are often incomplete, and there is no standardized format for recording metadata, leading to inefficiency during the metadata-based data retrieval process. Here, we propose a novel standardization method for DICOM metadata termed the Radiology Common Data Model (R-CDM).
Materials and Methods:
R-CDM was designed to be compatible with Health Level Seven International (HL7)/Fast Healthcare Interoperability Resources (FHIR) and linked with the Observational Medical Outcomes Partnership (OMOP)-CDM to achieve a seamless link between clinical data and medical imaging data. The terminology system was standardized using the RadLex playbook, a comprehensive lexicon of radiology. As a proof of concept, the R-CDM conversion process was conducted with 41.7 TB of data from the Ajou University Hospital. The R-CDM database visualizer was developed to visualize the main characteristics of the R-CDM database.
Results:
Information from 2801360 cases and 87203226 DICOM files was organized into two tables constituting the R-CDM. Information on imaging device and image resolution was recorded with more than 99.9% accuracy. Furthermore, OMOP-CDM and RCDM were linked to efficiently extract specific types of images from specific patient cohorts.
Conclusion
R-CDM standardizes the structure and terminology for recording medical imaging data to eliminate incomplete and unstandardized information. Successful standardization was achieved by the extract, transform, and load process and image classifier. We hope that the R-CDM will contribute to deep learning research in the medical imaging field by enabling the securement of large-scale medical imaging data from multinational institutions.
2.Comparison of Psychological Characteristics of Lesch Types 2 (Anxiety Model) and 3 (Depressive Model) Alcoholism
Sae Heon JANG ; Min Ho CHANG ; Young Myo JAE ; Jin Hyuk CHOI ; Gyeong Hwan LEE
Mood and Emotion 2019;17(2):49-56
BACKGROUND: Lesch types 2 (L2, anxiety model) and 3 (L3, depressive model) of alcoholism exhibit different responses to anti-craving agents, and most treatment guidelines provide differential treatment strategies for bipolar depression (DEP) and unipolar DEP. We compare the psychological characteristics of L2 and L3 alcoholism and between the unipolar and bipolar subgroups.METHODS: We reviewed medical records of patients who were diagnosed with alcohol use disorder using the DSM-5 diagnostic criteria and classified as L2 and L3 using Lesch Alcohol typology software. All patients completed self-report scales (Alcohol Use Disorders Identification Test [AUDIT], Beck Anxiety Inventory [BAI], Beck Depression Inventory-II [BDI-II], and Korean Symptom Checklist-95 [KSCL95]). The data were analyzed using descriptive statistics, the Wilcoxon Rank-Sum test, and ANOVA.RESULTS: Of the 43 patients, 23 were assigned L2, and 20 were assigned L3. The scores for the KSCL95 subscales fell generally in the increasing order of the L2-unipolar (L2U, n=10), L2-bipolar (L2B, n=13), L3-unipolar (L3U, n=11), and L3-bipolar (L3B, n=9) types. The L3B scores were greater than the L3U scores for most KSCL95 subscales, by contrast with the DEP and BAI scores.CONCLUSION: We found psychological differences between L2 and L3 and identified the unique psychological characteristics for each subgroup by polarity. The psychological characteristics of these subgroups of alcohol use disorder may help improve the treatment success rates through individualized treatment strategies.
Alcoholism
;
Anxiety
;
Bipolar Disorder
;
Depression
;
Depressive Disorder
;
Humans
;
Medical Records
;
Weights and Measures
3.A Study of Factors Influencing Subjective Memory Complaints among Community Dwelling Elderly.
Ui Sub LEE ; Young Myo JAE ; Sae Heon JANG ; Jin Hyuk CHOI ; Kyoung Hwan LEE
Journal of Korean Geriatric Psychiatry 2018;22(1):19-24
OBJECTIVE: We examined the factors influencing subjective memory complaints among community dwelling elderly in urban area. METHODS: The subjects of this research were 160 community-dwelling elderly people without dementia and major depressive disorder. The questionnaires regarding the socio-demographic characteristics were conducted by each person. They include Korean version of Subjective Memory Complaints Questionnaires (SMCQ), Korean version of Short Geriatric Depression Scale (SGDS-K) and Korean version of Mini-Mental State Examination (K-MMSE). Subjective memory complaints were defined as above 4 points of SMCQ. RESULTS: 39.38% of the subjects had subjective memory complaints. There were significant associations between subjective memory complaints and SGDS-K (p < 0.001), physical illness (p=0.001), but there was no association with K-MMSE (p=0.383). CONCLUSION: There is a discrepancy between subjective memory complaints and actual cognitive impairments. This discrepancy suggests that the depressive disorders including minor depressive disorder and subsyndromal depression, might play a role in the subjective memory complaints rather than actual cognitive impairments in community-dwelling elderly people. Therefore, the treatments for the depressive disorders should be considered in dealing with the subjective memory complaints.
Aged*
;
Cognition Disorders
;
Dementia
;
Depression
;
Depressive Disorder
;
Depressive Disorder, Major
;
Humans
;
Independent Living*
;
Memory*
4.Lactobacillus plantarum-derived Extracellular Vesicles Protect Atopic Dermatitis Induced by Staphylococcus aureus-derived Extracellular Vesicles.
Min Hye KIM ; Seng Jin CHOI ; Hyun Il CHOI ; Jun Pyo CHOI ; Han Ki PARK ; Eun Kyoung KIM ; Min Jeong KIM ; Byoung Seok MOON ; Taek ki MIN ; Mina RHO ; Young Joo CHO ; Sanghwa YANG ; Yoon Keun KIM ; You Young KIM ; Bok Yang PYUN
Allergy, Asthma & Immunology Research 2018;10(5):516-532
PURPOSE: The microbial environment is an important factor that contributes to the pathogenesis of atopic dermatitis (AD). Recently, it was revealed that not only bacteria itself but also extracellular vesicles (EVs) secreted from bacteria affect the allergic inflammation process. However, almost all research carried out so far was related to local microorganisms, not the systemic microbial distribution. We aimed to compare the bacterial EV composition between AD patients and healthy subjects and to experimentally find out the beneficial effect of some bacterial EV composition METHODS: Twenty-seven AD patients and 6 healthy control subjects were enrolled. After urine and serum were obtained, EVs were prepared from samples. Metagenomic analysis of 16s ribosomal DNA extracted from the EVs was performed, and bacteria showing the greatest difference between controls and patients were identified. In vitro and in vivo therapeutic effects of significant bacterial EV were evaluated with keratinocytes and with Staphylococcus aureus-induced mouse AD models, respectively. RESULTS: The proportions of Lactococcus, Leuconostoc and Lactobacillus EVs were significantly higher and those of Alicyclobacillus and Propionibacterium were lower in the control group than in the AD patient group. Therefore, lactic acid bacteria were considered to be important ones that contribute to the difference between the patient and control groups. In vitro, interleukin (IL)-6 from keratinocytes and macrophages decreased and cell viability was restored with Lactobacillus plantarum-derived EV treatment prior to S. aureus EV treatment. In S. aureus-induced mouse AD models, L. plantarum-derived EV administration reduced epidermal thickening and the IL-4 level. CONCLUSIONS: We suggested the protective role of lactic acid bacteria in AD based on metagenomic analysis. Experimental findings further suggest that L. plantarum-derived EV could help prevent skin inflammation.
Alicyclobacillus
;
Animals
;
Bacteria
;
Cell Survival
;
Dermatitis, Atopic*
;
DNA, Ribosomal
;
Extracellular Vesicles*
;
Healthy Volunteers
;
Humans
;
In Vitro Techniques
;
Inflammation
;
Interleukin-4
;
Interleukins
;
Keratinocytes
;
Lactic Acid
;
Lactobacillus*
;
Lactococcus
;
Leuconostoc
;
Macrophages
;
Metagenomics
;
Mice
;
Microbiota
;
Probiotics
;
Propionibacterium
;
Skin
;
Staphylococcus*
;
Therapeutic Uses
5.Iatrogenic Dural Arteriovenous Fistula after Superficial Temporal Artery to Middle Cerebral Artery Anastomosis: A Case Report.
Seng Won KIM ; Kil Sung CHAE ; Jae Hyon SHIM ; Seung Jin RHO ; Hak Ki CHOI ; Hwa Seung PARK
Korean Journal of Neurotrauma 2015;11(2):151-153
Dural arteriovenous fistulas (AVFs) are uncommon, representing only 10% to 15% of all intracranial AVFs. Here we present the case of a patient with cerebral infarction who experienced a dural AVF after craniotomy for superficial temporal artery (STA) to middle cerebral artery (MCA) bypass surgery. A 48-year-old man presented with dysarthria and right side hemiparesis. A brain magnetic resonance imaging scan revealed multiple acute infarctions and severe stenosis of the left MCA. Therefore, STA-MCA bypass surgery was performed. A follow-up angiography performed 2 weeks after the surgery showed an abnormal vascular channel from the left middle meningeal artery (MMA) to the middle meningeal vein (MMV) just anterior to the border of the craniotomy margin. This fistula originated from a screw used for cranial fixation. The screw injured the MMA and MMV, and this resulted in the formation of a fistula. The fistula was successfully treated with transarterial embolization. Surgeons should be careful when fixing bones with screws and plates as fistulas can develop if vessels are injured.
Angiography
;
Brain
;
Central Nervous System Vascular Malformations*
;
Cerebral Infarction
;
Cerebral Revascularization
;
Constriction, Pathologic
;
Craniotomy
;
Dysarthria
;
Fistula
;
Follow-Up Studies
;
Humans
;
Infarction
;
Magnetic Resonance Imaging
;
Meningeal Arteries
;
Middle Aged
;
Middle Cerebral Artery*
;
Paresis
;
Temporal Arteries*
;
Veins
6.Acute Renal Failure in a Renal Allograft Recipient Caused by a Post-Biopsy Renal Arteriovenous Fistula with Transplant Renal Artery Stenosis.
Jin Ho LEE ; Hee Ryong LEE ; Seung Ho CHOI ; Peel JUNG ; Joon Seok OH ; Seung Min KIM ; Yong Hun SIN ; Yeon Soon JUNG ; Gyoo Sik JUNG ; Joong Kyung KIM
The Journal of the Korean Society for Transplantation 2012;26(4):287-292
Renal biopsy is an essential diagnostic tool for detecting acute and chronic kidney rejection as well as recurrent and de novo nephropathies in renal allograft recipients. However, a well-known complication of percutaneous renal biopsy is arteriovenous fistula (AVF). Most post-biopsy AVFs are asymptomatic and regress spontaneously but some AVFs result in hypertension, hematuria, and renal insufficiency. Whether post-biopsy AVF superimposed on transplant renal artery stenosis (TRAS) also regresses spontaneously is unknown. We present a case of acute renal insufficiency in a 51-year-old female renal allograft recipient with post-biopsy AVF and TRAS. Percutaneous angioplasty with stent implantation was performed for the TRAS and transcatheter arterial coil embolization therapy applied for AVF. The patient's renal function returned to baseline levels and is currently being followed up for 6 months.
Acute Kidney Injury
;
Angioplasty
;
Arteriovenous Fistula
;
Biopsy
;
Female
;
Hematuria
;
Humans
;
Hypertension
;
Kidney
;
Rejection (Psychology)
;
Renal Artery
;
Renal Artery Obstruction
;
Renal Insufficiency
;
Stents
;
Transplantation, Homologous
;
Transplants
7.A Case of Duodenal Wall Abscess Caused by a Foreign Body.
Byoung Hoon JI ; Ji Hoon YOON ; Jin Ho LEE ; Hee Ryong LEE ; Seong Min YU ; Min Dae KIM ; Young Il CHOI ; Il Seon LEE
Korean Journal of Gastrointestinal Endoscopy 2011;42(6):383-387
Duodenal abscess is a form of phlegmonous enterocolitis and is a rarely reported disease throughout the entire world. Duodenal abscess mostly develops from complications of duodenal ulcer perforation, and may result in a clinically fatal course because it is difficult to differentiate from some diseases such as gastric ulcer, gastric cancer, hepatobiliary disorders etc.. The therapeutic gold standard is surgical intervention including abscess removal and drainage. We experienced a case of duodenal abscess that expressed non-specific symptoms, weight loss and epigastric pain, and diagnosed by gastrointestinal endoscopy, abdominal computed tomography. We successfully treated it through surgical intervention with intravenous antibiotics.
Abscess
;
Anti-Bacterial Agents
;
Cellulitis
;
Drainage
;
Duodenal Ulcer
;
Endoscopy, Gastrointestinal
;
Enterocolitis
;
Foreign Bodies
;
Stomach Neoplasms
;
Stomach Ulcer
;
Weight Loss
8.Comparison of the Urine Protein to Creatinine Ratio with 24-Hour Urinary Protein Amounts in Patients with Kidney Transplants.
Su Jin KIM ; An Sook CHOI ; Jin Ho LEE ; Seong Min YU ; Joon Seok OH ; Sung Min KIM ; Yong Hun SIN ; Joong Kyung KIM
Korean Journal of Medicine 2011;81(1):82-88
BACKGROUND/AIMS: Many studies have reported the correlation between the spot urine protein to creatinine (P/C) ratio and 24-hour urinary protein amounts in patients with glomerulonephritis. This correlation has also been reported in Western patients with kidney transplants, but no prior study has reported on this association in Eastern populations. We compare the correlation between the spot urine P/C ratio and 24-hour urinary protein amounts and the associating factors in Korean patients with kidney transplants. METHODS: The study included 66 patients with kidney transplants from our hospital. The subjects had urine samples evaluated between January 2005 and July 2010. We compared 24-hour urinary protein amounts with a spot urine P/C ratio collected in the morning and analyzed the factors affecting the correlation in each group. RESULTS: The 24-hour urinary protein amounts were 1.31 +/- 1.69 g/day and the spot urine P/C ratio was 1.29 +/- 1.70 in all subjects. A strong positive linear correlation was observed between the 24-hour urinary protein amounts and the spot urine P/C ratio (r = 0.95). The primary factor affecting accurate quantitation of proteinuria using the spot urine P/C ratio was gender (p = 0.003). The spot urine P/C ratio and the 24-hour urinary protein levels were 1.05 +/- 1.51 and 1.26 +/- 1.68 g/day in males (p = 0.005) and 1.57 +/- 1.88 and 1.36 +/- 1.72 g/day in females (p = 0.047), respectively. CONCLUSIONS: We determined that the spot urine P/C ratio provides an accurate estimate of 24-hour urinary protein levels in Korean patients with kidney transplants.
Creatinine
;
Female
;
Glomerulonephritis
;
Humans
;
Kidney
;
Kidney Transplantation
;
Male
;
Proteinuria
;
Transplants
9.A Study on Hyperbaric Chambers for Treating Decompression Sickness in the Republic of Korea.
Kang Jin OH ; Seong Woo CHOI ; Jun Sik PARK ; Seng Uk LEE
Journal of the Korean Society of Emergency Medicine 2011;22(3):253-258
PURPOSE: With the recent increase in underwater activity, the number of people at risk for decompression sickness has greatly increased. However, an organized medical system for emergency treatment, evacuation, and hyperbaric oxygen therapy of decompression sickness has not been established yet. We collected information about domestic hyperbaric chambers available for treating decompression sickness. METHODS: We identified 95 hyperbaric chambers in hospitals, hydrospace construction corporations, military, maritime police, 119 rescue services, and other organizations through a telephone survey. We visited the 95 chambers and collected information about location, operating institutes, chamber specifications, and operational status. Twenty-four oxygen capsules were excluded from the study because of inadequate working pressure. RESULTS: Seventy-one hyperbaric chambers available for hyperbaric oxygen therapy were identified among 59 organizations. The hyperbaric chambers were distributed evenly along coastal lines; that is, 21 on the east coast, 26 on the west coast, 21 on the southern coast, and three on Jeju Island. Thirty-eight chambers with maximal working pressure of > or =5 atm could be used for severe decompression sickness and arterial gas embolism treatment. Twenty-nine chambers had a seating capacity equal to-or more than three patients. Twenty-eight chambers had two or more compartments; thus, they could handle complex medical situations. Thirty-eight chambers with medical locks were useful for severe decompression sickness treatment. CONCLUSION: A sufficient number of domestic hyperbaric chambers available for treating decompression sickness were distributed evenly along the coastal lines. However, potential barriers need to be overcome to establish an efficient decompression sickness treatment system.
Academies and Institutes
;
Capsules
;
Decompression
;
Decompression Sickness
;
Diving
;
Embolism, Air
;
Emergency Treatment
;
Humans
;
Hyperbaric Oxygenation
;
Military Personnel
;
Oxygen
;
Police
;
Republic of Korea
;
Telephone
10.Case of ABO-Incompatible Living Donor Kidney Transplantation without Blood Products in a Jehovah's Witness.
An Sook CHOI ; Seong Min YU ; Jin Ho LEE ; Joon Suk OH ; Seong Min KIM ; Yong Hun SIN ; Joong Kyung KIM
The Journal of the Korean Society for Transplantation 2011;25(1):38-42
ABO-incompatible kidney transplantations have been performed successfully in Korea without splenectomy using plasmapheresis, anti-CD20 monoclonal antibody infusions and other immunosuppressants. However, there is no report of a case of ABO-incompatible kidney transplantation in a Jehovah's Witness. Hence, we report our experience of successful ABO-incompatible kidney transplantation without blood products in a Jehovah's Witness. The recipient was treated with six sessions of plasmapheresis and he received intravenous rituximab before transplantation. Immunosuppressive regimen consisted of tacrolimus, mycophenolate mofetil and steroid. The replacement fluid for plasmapheresis was 5%% albumin solution instead of fresh frozen plasma. We measured the clotting factors before and after plasmapheresis and used cryoprecipitate to prevent bleeding.
Antibodies, Monoclonal, Murine-Derived
;
Hemorrhage
;
Humans
;
Immunosuppressive Agents
;
Kidney
;
Kidney Transplantation
;
Korea
;
Living Donors
;
Mycophenolic Acid
;
Plasma
;
Plasmapheresis
;
Rituximab
;
Splenectomy
;
Tacrolimus
;
Transplants
;
Wit and Humor as Topic

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