1.Clinical Application of Next-Generation Sequencing in Patients With Breast Cancer: Real-World Data
Koung Jin SUH ; Se Hyun KIM ; Yu Jung KIM ; Heechul SHIN ; Eunyoung KANG ; Eun-Kyu KIM ; Sejoon LEE ; Ji Won WOO ; Hee Young NA ; Soomin AHN ; Bum-Sup JANG ; In Ah KIM ; So Yeon PARK ; Jee Hyun KIM
Journal of Breast Cancer 2022;25(5):366-378
		                        		
		                        			 Purpose:
		                        			Next-generation sequencing (NGS)-based tumor panel testing has been reimbursed by the Korean government since 2017. We evaluated the use of NGS-based tumor panel testing in real-world clinical practice, focusing on molecular profiling (MP)-guided breast cancer treatment. 
		                        		
		                        			Methods:
		                        			A total of 137 breast cancer patients underwent NGS panel testing between December 2017 and July 2020 at Seoul National University Bundang Hospital (SNUBH).Samples from patients were profiled using an in-house SNUBH pan-cancer panel. Sixty-four patients were profiled on SNUBH Pan_Cancer v1.0, targeting 89 genes, while 73 patients were profiled on SNUBH Pan_Cancer v2.0, targeting 546 genes. 
		                        		
		                        			Results:
		                        			Breast cancer subtypes included hormone receptor+/human epidermal growth factor receptor 2 (HER2)− (n = 87), triple-negative (n = 44), and HER2+ (n = 6). Most patients had locally advanced or metastatic cancers (92%). Approximately 92% (126/137) of the patients had significant genomic alterations (tiers I and II), and 62% (85/137) had targetable genomic alterations. The most common targetable genomic alterations were PIK3CA (39%) and ESR1 mutations (9%), followed by ERBB2 (7%), PTEN (7%), BRCA2 (6%), and BRCA1 mutations (4%). Of the 81 patients with locally advanced/metastatic breast cancer with targetable genomic alterations, 6 (7.4%) received MP-guided treatments, including PARP inhibitor (n = 4), ERBB2-directed therapy (n = 1), and PI3K inhibitor (n = 1). Among these 6 patients, 4 participated in clinical trials, 1 underwent treatment at their own expense, and 1 received drugs through an expanded access program. The remaining 66 patients (81%) with targetable genomic alteration did not receive MP-guided treatment due to lack of matched drugs and/or clinical trials, poor performance status, and/or financial burden. 
		                        		
		                        			Conclusion
		                        			NGS panel testing allowed MP-guided treatment in only 4.7% (6/127) of patients with advanced breast cancer in a real-world setting. The availability of matched drugs is critical for the realistic implementation of personalized treatment. 
		                        		
		                        		
		                        		
		                        	
2.Application of deep learning algorithm to detect COVID-19 pneumonia in chest X-ray
Se Bum JANG ; Han Sol CHUNG ; Sin-Yul PARK
Journal of the Korean Society of Emergency Medicine 2021;32(3):249-256
		                        		
		                        			Objective:
		                        			This study evaluated the deep learning (DL) algorithm performance to detect lesions that suggest pneumonia in chest X-rays (CXR) of suspected coronavirus disease 2019 (COVID-19) patients. 
		                        		
		                        			Methods:
		                        			This retrospective study included consecutive patients who visited a screening clinic in Daegu, and were suspected to be afflicted with the COVID-19 during the COVID-19 epidemic. CXR were analyzed using the commercial artificial intelligence product that provides free online DL algorithms to the public for COVID-19. Computerized tomography was used as the standard reference. Performance of the DL algorithm was evaluated by the sensitivity and specificity, and results were compared to the CXR records of emergency physicians (EP) in charge of the actual screening triage clinic during the COVID-19 epidemic. 
		                        		
		                        			Results:
		                        			Totally, 114 patients were evaluated, of which 38 patients were positive for COVID-19. In 85 CXRs examined (36 COVID-19 and 49 non-COVID-19) with findings of pneumonia in computerized tomography, the DL algorithm showed significantly higher sensitivity as compared to the EP (DL, 98.8% [93.6%-99.9%] vs. EP, 85.9% [76.6%-92.5%]; P<0.01). Moreover, the DL algorithm showed significantly higher sensitivity for detecting CXRs with COVID-19 pneumonia, as compared to the EP (DL, 100.0% [90.3%-100%] vs. EP, 91.7% [77.5%-98.3%]; P=0.08). 
		                        		
		                        			Conclusion
		                        			We conclude that for examining the CXR of patients with suspected COVID-19, sensitivity of the DL algorithm is superior than the EP for detecting lesions suggesting pneumonia. Thus, the application of the DL algorithm is potentially useful in screening triage clinics to detect COVID-19 pneumonia.
		                        		
		                        		
		                        		
		                        	
3.Application of deep learning algorithm to detect COVID-19 pneumonia in chest X-ray
Se Bum JANG ; Han Sol CHUNG ; Sin-Yul PARK
Journal of the Korean Society of Emergency Medicine 2021;32(3):249-256
		                        		
		                        			Objective:
		                        			This study evaluated the deep learning (DL) algorithm performance to detect lesions that suggest pneumonia in chest X-rays (CXR) of suspected coronavirus disease 2019 (COVID-19) patients. 
		                        		
		                        			Methods:
		                        			This retrospective study included consecutive patients who visited a screening clinic in Daegu, and were suspected to be afflicted with the COVID-19 during the COVID-19 epidemic. CXR were analyzed using the commercial artificial intelligence product that provides free online DL algorithms to the public for COVID-19. Computerized tomography was used as the standard reference. Performance of the DL algorithm was evaluated by the sensitivity and specificity, and results were compared to the CXR records of emergency physicians (EP) in charge of the actual screening triage clinic during the COVID-19 epidemic. 
		                        		
		                        			Results:
		                        			Totally, 114 patients were evaluated, of which 38 patients were positive for COVID-19. In 85 CXRs examined (36 COVID-19 and 49 non-COVID-19) with findings of pneumonia in computerized tomography, the DL algorithm showed significantly higher sensitivity as compared to the EP (DL, 98.8% [93.6%-99.9%] vs. EP, 85.9% [76.6%-92.5%]; P<0.01). Moreover, the DL algorithm showed significantly higher sensitivity for detecting CXRs with COVID-19 pneumonia, as compared to the EP (DL, 100.0% [90.3%-100%] vs. EP, 91.7% [77.5%-98.3%]; P=0.08). 
		                        		
		                        			Conclusion
		                        			We conclude that for examining the CXR of patients with suspected COVID-19, sensitivity of the DL algorithm is superior than the EP for detecting lesions suggesting pneumonia. Thus, the application of the DL algorithm is potentially useful in screening triage clinics to detect COVID-19 pneumonia.
		                        		
		                        		
		                        		
		                        	
4.Impact of Multiple Prostate Biopsies: Risk of Perioperative Complications and Biochemical Recurrence After Radical Prostatectomy
Kyong Min PARK ; Jae-Wook CHUNG ; Jun-Koo KANG ; Teak Jun SHIN ; Se Yun KWON ; Hyun Chan JANG ; Yun-Sok HA ; Seock Hwan CHOI ; Wonho JUNG ; Jun Nyung LEE ; Byung Hoon KIM ; Bum Soo KIM ; Hyun Tae KIM ; Jae Soo KIM ; Tae-Hwan KIM ; Eun Sang YOO ; Kyung Seop LEE ; Chun Il KIM ; Sung Kwang CHUNG ; Tae Gyun KWON
Korean Journal of Urological Oncology 2020;18(1):24-31
		                        		
		                        			 Purpose:
		                        			The aim of this study was to analyze the perioperative complications and oncological outcomes of radical prostatectomy (RP) in patients who underwent multiple prostate biopsies.
 
		                        		
		                        			Materials and Methods:
		                        			A total of 1,112 patients who underwent RP between January 2009 and April 2016 at 4 different centers were included in this study. We divided these patients into 2 groups: patients who underwent only 1st biopsy, and those who underwent 2nd or more repeated biopsies. The association between the number of prior biopsies and perioperative complications and biochemical recurrence (BCR) was analyzed.
 
		                        		
		                        			Results:
		                        			Of 1,112 patients, 1,046 patients (94.1%) underwent only 1st biopsy, and 66 (5.9%) underwent 2nd or more repeated biopsies. There were no significant differences in preoperative prostate-specific antigen levels, operation times, blood loss volumes, or hospital stay durations (all p>0.05). Patients who underwent multiple prostate biopsies presented with a localized tumor significantly more often (p<0.05). The Gleason score and rate of positive surgical margins were significantly lower in patients with multiple biopsies (all p<0.05). The Cox proportional hazards model analysis indicated that there was no association between the number of prior prostate biopsies and BCR (p>0.05). Kaplan-Meier curve analysis indicated that BCR-free survival rates between the 2 groups were similar (p>0.05).
 
		                        		
		                        			Conclusions
		                        			Multiple prostate biopsies are not associated with an increased risk of perioperative complications, adverse pathological outcomes, or higher rates of BCR in patients who have undergone RP. (Korean J Urol Oncol 2020;18:24-31) 
		                        		
		                        		
		                        		
		                        	
5.Needs for Medical and Rehabilitation Services in Adults With Cerebral Palsy in Korea.
Myung Woo PARK ; Won Sep KIM ; Moon Suk BANG ; Jae Young LIM ; Hyung Ik SHIN ; Ja Ho LEIGH ; Keewon KIM ; Bum Sun KWON ; Soong Nang JANG ; Se Hee JUNG
Annals of Rehabilitation Medicine 2018;42(3):465-472
		                        		
		                        			
		                        			OBJECTIVE: To investigate medical comorbidities and needs for medical and rehabilitation services of adults with cerebral palsy (CP) in Korea. METHODS: This was a prospective cross-sectional study. One hundred fifty-four adults with CP were enrolled in the study between February 2014 and December 2014. Information was obtained from participants regarding functional status, demographic and socioeconomic data, medical problems, and requirements for and utilization of medical and rehabilitation services. RESULTS: The participants included 93 males and 61 females with a mean age of 40.18±9.15 years. The medical check-up rate of adults with CP was lower than that of healthy adults and the total population with disabilities (53.2% vs. 58.6% vs. 70.4%). A quarter of the subjects failed to visit the hospital during the past year, and the main reason was the financial burden. Due to a cost burden and lack of knowledge, more than one-third of the subjects had unmet needs for rehabilitation services; the majority reported needs for rehabilitation services, such as physical therapy for pain management. CONCLUSION: The medical check-up rate was lower in the adults with CP, even though their medical comorbidities were not less than those of healthy people. Several non-medical reasons hindered them from receiving proper medical and rehabilitation services. Such barriers should be managed effectively.
		                        		
		                        		
		                        		
		                        			Adult*
		                        			;
		                        		
		                        			Cerebral Palsy*
		                        			;
		                        		
		                        			Comorbidity
		                        			;
		                        		
		                        			Cross-Sectional Studies
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Korea*
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Pain Management
		                        			;
		                        		
		                        			Prospective Studies
		                        			;
		                        		
		                        			Rehabilitation*
		                        			
		                        		
		                        	
6.Inhalation Lung Injury Associated with Humidifier Disinfectants in Adults.
Jin Won HUH ; Sang Bum HONG ; Kyung Hyun DO ; Hyun Jung KOO ; Se Jin JANG ; Moo Song LEE ; Domyung PAEK ; Dong Uk PARK ; Chae Man LIM ; Younsuck KOH
Journal of Korean Medical Science 2016;31(12):1857-1862
		                        		
		                        			
		                        			We recently established a novel disease entity presented as progressive respiratory failure associated with the inhalation of humidifier disinfectants. In April 2011, we encountered a series of peripartum patients with complaints of respiratory distress of unknown etiology, which was an uncommon phenomenon. Accordingly, we created a multidisciplinary team comprising intensivists, radiologists, pathologists, epidemiologists, and the Korea Centers for Disease Control and Prevention (KCDC). Further, we defined the disease entity and performed a case-control study, epidemiologic investigation, and animal study to determine the etiology. The study findings indicated that the lung injury outbreak was related to the inhalation of humidifier disinfectants and showed that household chemical inhalation can cause severe respiratory failure. Following the withdrawal of humidifier disinfectants from the Korean market in 2012, no such cases were reported. This tragic event is a warning that appropriate safety regulations and monitoring for potential toxic household chemicals are critical to protect public health.
		                        		
		                        		
		                        		
		                        			Adult*
		                        			;
		                        		
		                        			Animals
		                        			;
		                        		
		                        			Case-Control Studies
		                        			;
		                        		
		                        			Centers for Disease Control and Prevention (U.S.)
		                        			;
		                        		
		                        			Disinfectants*
		                        			;
		                        		
		                        			Family Characteristics
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Humidifiers*
		                        			;
		                        		
		                        			Inhalation*
		                        			;
		                        		
		                        			Korea
		                        			;
		                        		
		                        			Lung Injury*
		                        			;
		                        		
		                        			Lung*
		                        			;
		                        		
		                        			Peripartum Period
		                        			;
		                        		
		                        			Public Health
		                        			;
		                        		
		                        			Respiratory Insufficiency
		                        			;
		                        		
		                        			Social Control, Formal
		                        			
		                        		
		                        	
7.Ethanolic Extract of the Seed of Zizyphus jujuba var. spinosa Ameliorates Cognitive Impairment Induced by Cholinergic Blockade in Mice.
Hyung Eun LEE ; So Young LEE ; Ju Sun KIM ; Se Jin PARK ; Jong Min KIM ; Young Woo LEE ; Jun Man JUNG ; Dong Hyun KIM ; Bum Young SHIN ; Dae Sik JANG ; Sam Sik KANG ; Jong Hoon RYU
Biomolecules & Therapeutics 2013;21(4):299-306
		                        		
		                        			
		                        			In the present study, we investigated the effect of ethanolic extract of the seed of Zizyphus jujuba var. spinosa (EEZS) on cholinergic blockade-induced memory impairment in mice. Male ICR mice were treated with EEZS. The behavioral tests were conducted using the passive avoidance, the Y-maze, and the Morris water maze tasks. EEZS (100 or 200 mg/kg, p.o.) significantly ameliorated the scopolamine-induced cognitive impairment in our present behavioral tasks without changes of locomotor activity. The ameliorating effect of EEZS on scopolamine-induced memory impairment was significantly reversed by a sub-effective dose of MK-801 (0.0125 mg/kg, s.c.). In addition, single administration of EEZS in normal naive mouse enhanced latency time in the passive avoidance task. Western blot analysis was employed to confirm the mechanism of memory-ameliorating effect of EEZS. Administration of EEZS (200 mg/kg) increased the level of memory-related signaling molecules, including phosphorylation of extracellular signal-regulated kinase or cAMP response element-binding protein in the hippocampal region. Also, the time-dependent expression level of brain-derived neurotrophic factor by the administration of EEZS was markedly increased from 3 to 9 h. These results suggest that EEZS has memory-ameliorating effect on scopolamine-induced cognitive impairment, which is mediated by the enhancement of the cholinergic neurotransmitter system, in part, via NMDA receptor signaling, and that EEZS would be useful agent against cognitive dysfunction such as Alzheimer's disease.
		                        		
		                        		
		                        		
		                        			Alzheimer Disease
		                        			;
		                        		
		                        			Animals
		                        			;
		                        		
		                        			Blotting, Western
		                        			;
		                        		
		                        			Brain-Derived Neurotrophic Factor
		                        			;
		                        		
		                        			Cyclic AMP Response Element-Binding Protein
		                        			;
		                        		
		                        			Dizocilpine Maleate
		                        			;
		                        		
		                        			Ethanol*
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Maze Learning
		                        			;
		                        		
		                        			Memory
		                        			;
		                        		
		                        			Mice*
		                        			;
		                        		
		                        			Mice, Inbred ICR
		                        			;
		                        		
		                        			Motor Activity
		                        			;
		                        		
		                        			N-Methylaspartate
		                        			;
		                        		
		                        			Neurotransmitter Agents
		                        			;
		                        		
		                        			Phosphorylation
		                        			;
		                        		
		                        			Phosphotransferases
		                        			;
		                        		
		                        			Scopolamine Hydrobromide
		                        			;
		                        		
		                        			Ziziphus*
		                        			
		                        		
		                        	
8.Injection of porous polycaprolactone beads containing autologous myoblasts in a dog model of fecal incontinence.
Sung Bum KANG ; Hye Seung LEE ; Jae Young LIM ; Se Heang OH ; Sang Joon KIM ; Sa Min HONG ; Je Ho JANG ; Jeong Eun CHO ; Sung Min LEE ; Jin Ho LEE
Journal of the Korean Surgical Society 2013;84(4):216-224
		                        		
		                        			
		                        			PURPOSE: Few studies have examined whether bioengineering can improve fecal incontinence. This study designed to determine whether injection of porous polycaprolactone beads containing autologous myoblasts improves sphincter function in a dog model of fecal incontinence. METHODS: The anal sphincter of dogs was injured and the dogs were observed without and with (n = 5) the injection of porous polycaprolactone beads containing autologous myoblasts into the site of injury. Autologous myoblasts purified from the gastrocnemius muscles were transferred to the beads. Compound muscle action potentials (CMAP) of the pudendal nerve, anal sphincter pressure, and histopathology were determined 3 months after treatment. RESULTS: The amplitudes of the CMAP in the injured sphincter were significantly lower than those measured before injury (1.22 mV vs. 3.00 mV, P = 0.04). The amplitudes were not different between dogs with and without the injection of autologous myoblast beads (P = 0.49). Resting and squeezing pressures were higher in dogs treated with autologous myoblast beads (2.00 mmHg vs. 1.80 mmHg; 6.13 mmHg vs. 4.02 mmHg), although these differences were not significant in analyses of covariance adjusted for baseline values. The injection site was stained for smooth muscle actin, but showed evidence of foreign body inflammatory reactions. CONCLUSION: This was the first study to examine whether bioengineering could improve fecal incontinence. Although the results did not show definite evidence that injection of autologous myoblast beads improves sphincter function, we found that the dog model was suitable and reliable for studying the effects of a potential treatment modality for fecal incontinence.
		                        		
		                        		
		                        		
		                        			Actins
		                        			;
		                        		
		                        			Action Potentials
		                        			;
		                        		
		                        			Anal Canal
		                        			;
		                        		
		                        			Animals
		                        			;
		                        		
		                        			Bioengineering
		                        			;
		                        		
		                        			Dogs
		                        			;
		                        		
		                        			Fecal Incontinence
		                        			;
		                        		
		                        			Foreign Bodies
		                        			;
		                        		
		                        			Muscle, Smooth
		                        			;
		                        		
		                        			Muscles
		                        			;
		                        		
		                        			Myoblasts
		                        			;
		                        		
		                        			Polyesters
		                        			;
		                        		
		                        			Pudendal Nerve
		                        			
		                        		
		                        	
9.Short-term Clinical Outcome of Patterned Scanning Laser Photocoagulation With Short Exposure Time in Diabetic Retinopathy.
Bum Joo CHO ; Tae Wan KIM ; Se Joon WOO ; Hum CHUNG ; Jang Won HEO
Journal of the Korean Ophthalmological Society 2009;50(3):376-382
		                        		
		                        			
		                        			PURPOSE: To investigate the clinical effect and complications of patterned scanning laser photocoagulation with short exposure time in diabetic retinopathy. METHODS: A prospective study was performed on patients with diabetic retinopathy who required panretinal photocoagulation (PRP). Twenty-nine eyes of twenty five consecutive patients underwent patterned scanning laser photocoagulation with exposure time of 0.02 sec over the entire retina. Pain score at treatment, best-corrected visual acuity, the development of macular edema, regression of neovascularization in fluorescein angiography, and related complications were monitored during a three-month follow-up. RESULTS: Treatment time for PRP was much reduced to 6.1 min on the entire retina. Pain during the photocoagulation was moderate, and enabled patients to finish PRP with ease. During a three-month follow-up, visual acuity was well preserved. Foveal minimum thickness increased at 1 month after treatment and maintained in a study period of three months. Macular volume showed significant increase (3.6%) at 1 month after treatment, maximum increase (9.8%) at 2 months, and persistent increase (4.9%) at 3 months. In every patient with very severe nonproliferative diabetic retinopathy, retina was maintained, and in 10 of 18 eyes with proliferative diabetic retinopathy, neovascularization regressed during follow-up period. No significant complication occurred except a transient vitreous hemorrhage in one eye. CONCLUSIONS: Patterned scanning laser photocoagulation with short exposure time may induce transient macular edema, but the visual acuity was preserved without any other significant complication. It is considered to be a safe and efficient treatment method in diabetic retinopathy.
		                        		
		                        		
		                        		
		                        			Diabetic Retinopathy
		                        			;
		                        		
		                        			Eye
		                        			;
		                        		
		                        			Fluorescein Angiography
		                        			;
		                        		
		                        			Follow-Up Studies
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Light Coagulation
		                        			;
		                        		
		                        			Macular Edema
		                        			;
		                        		
		                        			Prospective Studies
		                        			;
		                        		
		                        			Retina
		                        			;
		                        		
		                        			Visual Acuity
		                        			;
		                        		
		                        			Vitreous Hemorrhage
		                        			
		                        		
		                        	
10.Induction of Animal Model of Scleroderma with Repeated Injection of Bleomycin.
Sang Koo LEE ; Young In NA ; Se Min JANG ; Seung Sam PAIK ; Yoon Kyoung SUNG ; Jae Bum JUN
The Journal of the Korean Rheumatism Association 2009;16(2):95-99
		                        		
		                        			
		                        			OBJECTIVE: To induce a mouse model of scleroderma with repeated bleomycin injections for research into human scleroderma at our research laboratory. METHODS: The protocol of Yamamoto et al. was replicated to establish the bleomycin-induced mouse model of scleroderma. RESULTS: A mouse model of scleroderma was induced by repeated subcutaneous injections of bleomycin. The dermal thickness increased with homogeneous and thickened collagen bundles. Semiquantitative measurements of dermal fibrosis were prominent in bleomycin-treated mice. CONCLUSION: A mouse model of scleroderma was induced with repeated injections of bleomycin at our laboratory.
		                        		
		                        		
		                        		
		                        			Animals
		                        			;
		                        		
		                        			Bleomycin
		                        			;
		                        		
		                        			Collagen
		                        			;
		                        		
		                        			Fibrosis
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Injections, Subcutaneous
		                        			;
		                        		
		                        			Mice
		                        			;
		                        		
		                        			Models, Animal
		                        			
		                        		
		                        	
            
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