1.Application of routine laboratory data in combination with machine learning in the differential diagnosis of lung tuberculosis
Yan WANG ; Huarong ZHENG ; Yifei LUO ; Jing ER ; Qingtao WANG ; Rui ZHOU ; Yufang LIANG ; Biao SONG ; Dawei HUANG
Chinese Journal of Laboratory Medicine 2022;45(12):1201-1206
		                        		
		                        			
		                        			Objective:To investigate the application value of establishing the differential diagnosis model of pulmonary tuberculosis using routine laboratory data.Methods:The retrospective study was conducted. The routine laboratory data of newly diagnosed patients with pulmonary tuberculosis and other pulmonary diseases in Beijng Jishuitan Hospital and Beijing Hepingli Hospital from May 2015 to November 2021were collected. According to the random numbers showed in the computer, all the 11516 patients were divided into training dataset and test dataset with a ratio of 9∶1. Four machine learning algorithms, Support Vector Machine, Random Forest, K-Nearest Neighbor and Logistic Regression, were used to build models and select features. The diagnostic accuracy of each model was verified by using the 10-fold cross-validation method and the performance of each model was evaluated by using the receptor operator of characteristic (ROC) curve.Results:Random Forest was selected as the optimal machine learning algorithm to build the best feature model in the study. According to importance scale of factors, the differential diagnosis model of pulmonary tuberculosis consisting of 37 non-specific test indexes. In the validation set and test set the accuracy and area under curve (AUC) of the models were 0.747 and 0.736, the sensitivity, specificity and accuracy were 68.03% and 68.75%, 70.91% and 67.90%, 70.30% and 68.12%, respectively.Conclusion:A key tool in the differential diagnosis model of pulmonary tuberculosis was established by routine laboratory data in combination with machine learning. The results of this study need to be further verified by more data from medical institutions.
		                        		
		                        		
		                        		
		                        	
2.Establishment and evaluation of a method for identifying the random error in the quantitative measurement procedure based on back propagation neural network
Yufang LIANG ; Huarong ZHENG ; Zhe WANG ; Xiang FENG ; Zewen HAN ; Biao SONG ; Huali CHENG ; Qingtao WANG ; Rui ZHOU
Chinese Journal of Laboratory Medicine 2022;45(5):543-548
		                        		
		                        			
		                        			Objective:To establish and evaluate a new real-time quality control method that can identify the random errors by using the backpropagation neural network (BPNN) algorithm and taking blood glucose test as an example.Methods:A total of 219 000 blood glucose results measured by Siemens advia 2 400 analytical system from January 2019 to July 2020 and derived from Laboratory Information System of Beijing Chaoyang Hospital Laboratory Department was regarded as the unbiased data of our study. Six deviations with different sizes were introduced to generate the corresponding biased data. With each biased data, BPNN and MovSD algorithms were used and tested, and then evaluated by traceability method and clinical method.Results:For BPNN algorithm, the block size was pre-set to 10 and the false-positive rate in all biases was within 0.1%. For MovSD, however, the optimal block size and exclusive limit were 150 and 10% separately and its false-positive rate in all biases was 0.38%, which was 0.28% higher than BPNN. Especially, for the least two error factors of 0.5 and 1, all the random errors were not detected by MovSD; for the error factor larger than 1, random errors could be detected by MovSD but the MNPed was higher than that of BPNN under all deviations. The difference was up to 91.67 times. 460 000 reference data were produced by traceability procedure. The uncertainty of BPNN algorithm evaluated by these reference data was only 0.078%.Conclusion:A real-time quality control method based on BPNN algorithm was successfully established to identify random errors in analytical phase, which was more efficient than MovSD method and provided a new idea and method for the identification of random errors in clinical practice.
		                        		
		                        		
		                        		
		                        	
3.Controversy and progress on whether to retain left colonic artery in radical resection of rectal cancer.
Chao Hui ZHEN ; Jin Feng ZHU ; Ruo Dai WU ; Biao ZHENG ; Heng Liang ZHU ; Zhi Wu ZENG ; Rui LIANG ; Shi Jian YI ; Zhong LIU ; Peng GONG
Chinese Journal of Gastrointestinal Surgery 2021;24(8):735-740
		                        		
		                        			
		                        			Japanese Society for Cancer of the Colon and Rectum (JSCCR) guideline 2019 recommended that lymph node dissection for advanced rectal cancer should include the lymphatic adipose tissue at the root of the inferior mesenteric vessels, but the ligation site of the inferior mesenteric artery (IMA) was not determined, and the NCCN guideline did not indicate clearly whether to retain the left colonic artery (LCA). Controversy over whether to retain LCA is no more than whether it can reduce the incidence of anastomotic complications or postoperative functional damage without affecting the patients' oncological outcome. Focusing on the above problems, this paper reviews the latest research progress. In conclusion, it is believed that the advantages of retaining LCA are supported by most studies, which can improve the blood supply of the proximal anastomosis, and technically can achieve the same range of lymph node dissection as IMA high ligation. However, whether it affects the survival of patients, reduces the incidence of anastomotic leakage, and improves the quality of life of patients, more high-quality evidence-based medical evidence is still needed.
		                        		
		                        		
		                        		
		                        			Arteries
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Laparoscopy
		                        			;
		                        		
		                        			Mesenteric Artery, Inferior/surgery*
		                        			;
		                        		
		                        			Quality of Life
		                        			;
		                        		
		                        			Rectal Neoplasms/surgery*
		                        			
		                        		
		                        	
4.Comparative Study of the Genetic Diversity, Antimicrobial Resistance, and Pathogenicity of
Shuang MENG ; Xiao Li DU ; Yong Lu WANG ; Feng Tian QU ; Gui Lin XIE ; Hai Jian ZHOU ; Jin Rui HU ; Zheng QIN ; Yue WANG ; Biao KAN ; Zhi Gang CUI
Biomedical and Environmental Sciences 2021;34(6):454-464
		                        		
		                        			Objective:
		                        			This study was performed to compare the genetic diversity, virulence, and antimicrobial resistance of 
		                        		
		                        			Methods:
		                        			A total of 38 clinical strains and 19 strains from healthy individuals were isolated from the samples collected in Ma'anshan City, Anhui Province. Their taxonomy was investigated using concatenated 
		                        		
		                        			Results:
		                        			The 57 
		                        		
		                        			Conclusions
		                        			The taxonomy, virulence properties, and antibiotic resistance of
		                        		
		                        		
		                        		
		                        			Aeromonas/pathogenicity*
		                        			;
		                        		
		                        			Case-Control Studies
		                        			;
		                        		
		                        			Drug Resistance, Bacterial/genetics*
		                        			;
		                        		
		                        			Genetic Variation
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Virulence Factors/genetics*
		                        			
		                        		
		                        	
		                				5.Analysis of triterpenoic acids in different medicinal parts of Poria cocos  (Schw.) Wolf using supercritical fluid chromatography
		                			
		                			Na LI ; Yuan-gui YANG ; Yue CHEN ; Rui XU ; Li-hua GU ; Yuan-biao XIE ; Song-ming LI ; Chang-sen ZHAN ; Zheng-tao WANG ; Li YANG
Acta Pharmaceutica Sinica 2021;56(4):1120-1126
		                        		
		                        			
		                        			 Qualitative and quantitative methods were used to establish the quality of different medicinal parts of 
		                        		
		                        	
6.Identification and antibiotics sensitivity analysis of Herbaspirillum huttiense in catheter-related bloodstream infection
Xiumei HU ; Biao YANG ; Li LIN ; Hengrui ZHAO ; Jing CHEN ; Fang ZHOU ; Bing SU ; Yongyu RUI ; Qian WANG ; Lei ZHENG
Chinese Journal of Laboratory Medicine 2020;43(5):582-586
		                        		
		                        			
		                        			Objective:To analyze the identification and antibiotics susceptibility of Herbaspirillum in catheter-related bloodstream infection, and improve the awareness and attention of the rare pathogenic microorganisms for clinicians and microbiologists. Methods:The bacterium was isolated from a positive blood culture of a hemodialysis patient with chronic renal failure. The smear of isolate was prepared, stained and observed by microscope. The single colonies were identified by mass spectrometry and VITEK 2 Compact identification and antibiotics sensitivity analysis system, respectively. Then, 16S ribosomal DNA (rDNA) was amplified and sequenced, and bacterial genome was sequenced.Results:The gram-negative bacilli was found in the positive blood culture bottle. After incubated on blood agar for 16 hours, milky white, bulging and non-haemolytic colonies were observed. The identification result was Burkholderia cepacian by VITEK 2_Compact and antimicrobial susceptibility testing showed resistance to aztreonam and polymyxin but sensitive to other drugs in N335 card. The isolate could not be identified by VITEK MS with clinical database. However, it was identified as Herbaspirillum huttiense/Herbaspirillum aquaticum with research database. The 16S rDNA of the strain was consistent with Herbaspirillum huttiense and Herbaspirillum aquaticum (more than 99%). High-throughput bacterial genome sequencing revealed that the isolate in this case shared 100% homology with Herbaspirillum huttiense subsp putei IAM 15032 in Genbank database, which confirmed that the isolate was Herbaspirillum huttiense. Conclusions:There are more and more environmental microorganisms evolved into human pathogenic bacteria. Herbaspirillum species are easy to be misidentified because its biochemical characteristics are similar to other strains.
		                        		
		                        		
		                        		
		                        	
7.Clinical analysis of 10 patients of acute promyelocytic leukemia with a variant RARα translocation.
Rui Hua MI ; Lin CHEN ; Jia LIU ; Tao LIU ; Kai WANG ; Li Hua DONG ; Xu LI ; Yu Zhuo HE ; Zheng Biao LIU ; Xue Jun GUO ; Shu Li GUO ; Hong Mian ZHAO ; Jia Hong TANG ; Xiao Miao MA ; Yu Fu LI ; Xu Dong WEI
Chinese Journal of Hematology 2020;41(3):257-260
8.Sequencing and analysis of John Cunningham polyomavirus DNA from acquired immunodeficiency syndrome patients with progressive multifocal leukoencephalopathy.
Cai-Qin HU ; Jun-Wei SU ; Meng-Yan WANG ; Yong-Zheng GUO ; Li-Jun XU ; Ran TAO ; Yi-Rui XIE ; Ying HUANG ; Biao ZHU
Chinese Medical Journal 2020;133(23):2887-2889
9.Vitro experiment of bone marrow mesenchymal stem cells mediated NIS gene and gold nanoparticles in the treatment of breast cancer
Lu ZHANG ; Rui GUO ; Benchao ZHENG ; Ying MIAO ; Chunfu ZHANG ; Biao LI
Chinese Journal of Nuclear Medicine and Molecular Imaging 2020;40(5):275-280
		                        		
		                        			
		                        			Objective:To prepare bone marrow mesenchymal stem cells (BMSCs) transfected with therapeutic gene early growth reactive protein 1 (Egr1)-sodium/iodine symporter (NIS) and carrying gold nanoparticles (AuNPs), and to investigate the feasibility of Egr1 in promoting NIS expression and the radiasensitization effect of AuNPs.Methods:BMSCs transfected with lentivirus(Lv)-Egr1-NIS-cytomegalovirus(CMV)-green fluorescent protein (GFP) in the experimental group and Lv-Egr1-GFP in the control group were prepared and the expression of NIS induced by radioiodine was verified by iodine uptake determination. The optimal incubation time and concentration of AuNPs were observed with laser confocal microscopy. The cytotoxicity of AuNPs suspension liquid was investigated using cytotoxicity test. Iodine uptake assay was performed to investigate NIS gene expression of BMSCs-Egr1-NIS incubated with AuNPs. In vitro chemotaxis of BMSCs-Egr1-NIS incubated with/without AuNPs to breast cancer cells were verified by cell migration experiment. The radiosensitization effect of AuNPs for 131I on killing breast cancer cells MDA-MB-231 were explored. The one-way analysis of variance and Dunnett t test were used for data analysis. Results:BMSCs-Egr1-NIS (unstable transformation) was successfully prepared. Egr1 could promote NIS expression with the induction of radioiodine. The iodine uptake capacity in BMSCs-Egr1-NIS increased by 2.5-5 times or even higher compared with BMSCs-Egr1-GFP. The better incubation conditions of AuNPs for BMSCs phagocytosis were 0.20 g/L(24 h) or 0.10 g/L(48 h). The cytotoxicity of AuNPs was low in appropriate incubation time and concentration, and there was no effect on iodine uptake and chemotaxis. The chemotaxis to MDA-MB-231 of BMSCs-Egr1-NIS was identified. AuNPs radiasensitization assay showed that absorbance ( A) 570 nm of MDA-MB-231 cells were significantly deferent in 131I killing groups and blank control group without 131I ( F=60.670, P<0.01), and the cytotoxicity of 131I to MDA-MB-231 cells in the 131I killing groups with 0.20 g/L AuNPs and 0.40 g/L AuNPs ( A570 nm values: 0.87±0.05, 0.41±0.07) was significantly higher than that in the group with 0 g/L AuNPs ( A570 nm=1.39±0.11; both P<0.01). Conclusions:BMSCs, transfected with therapeutic gene Egr1-NIS and incubated with AuNPs, can be used as a carrier to target breast cancer. NIS gene expression of BMSCs-Egr1-NIS was highly promoted in the presence of radioiodine. At the same time, AuNPs can be used as a radiation sensitizer for 131I treatment.
		                        		
		                        		
		                        		
		                        	
10.Chemical components and pharmacological action of Aconiti Radix.
Shuang LI ; Rui LI ; Yong ZENG ; Xian-Li MENG ; Chuan-Biao WEN ; Shi-Chao ZHENG
China Journal of Chinese Materia Medica 2019;44(12):2433-2443
		                        		
		                        			
		                        			Aconiti Radix is a commonly used traditional Chinese medicine( TCM) herb in clinic,with the effects in expelling wind and removing damness,warming menstruation and relieving pain. With a long medicinal history and high medicinal value,it was used for anemofrigid-damp arthralgia,arthralgia,cold hernia and anesthesia analgesia. Modern pharmacological studies have shown that Aconiti Radix has a good therapeutic effect on rheumatoid arthritis,neuropathic pain and hypertension. As a well-known toxic TCM herb,its main pharmacodynamic and toxic components are alkaloids,which can lead to neurotoxicity and cardiotoxicity while exerting anti-inflammatory,analgesic,anti-tumor and other pharmacodynamic effects. Therefore,it is often processed to reduce its toxicity or combined with Paeoniae Radix Alba and Stephaniae Tetrandrae Radix to achieve the purpose of reducing toxicity and increasing efficacy in clinic.In recent years,with the deepening of the study on the incompatibility of TCM represented by " eighteen incompatible herbs",there have been new findings about TCM incompatibility. It has been found complementary effect,rather than no obvious toxic and side effects after the combination with incompatible herbs of Aconiti Radix. To provide the basis for further study and clinical application of Aconiti Radix,this paper reviewed chemical components,pharmacological action,toxicity and compatibility of Aconiti Radix by consulting relevant literatures published in recent years at home and abroad. Meanwhile,this paper also described the relationship between chemical constituents,as well as anti-inflammatory,analgesic,anti-tumor and other pharmacological effects and toxicity.
		                        		
		                        		
		                        		
		                        			Aconitum
		                        			;
		                        		
		                        			chemistry
		                        			;
		                        		
		                        			Alkaloids
		                        			;
		                        		
		                        			Drugs, Chinese Herbal
		                        			;
		                        		
		                        			pharmacology
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Medicine, Chinese Traditional
		                        			;
		                        		
		                        			Plant Roots
		                        			;
		                        		
		                        			chemistry
		                        			
		                        		
		                        	
            
Result Analysis
Print
Save
E-mail