1.Extraction and purification of NUDT9 homology domain of human transient receptor potential melastatin 2 channel.
Peiwu YE ; Xiafei YU ; Cheng MA ; Wei YANG
Journal of Zhejiang University. Medical sciences 2019;48(1):5-11
OBJECTIVE:
To develop methods of extraction and purification of Cterminal NUDT9 homology domain of human transient receptor potential melastatin 2 (TRPM2) channel.
METHODS:
After sonication and centrifuge of strain Rosetta (DE3) which was induced by isopropylthio-β-D-galactoside, GST-NUDT9-H was collected after the binding of supernatant with GST beads and eluted with reduced glutathione. Then the elution buffer containing fusion protein was purified by size exclusion chromatography after concentration and centrifuge. Finally, with the cleavage of thrombin and binding with the GST beads, NUDT9-H with high purity in supernatant was collected.
RESULTS:
The GST-NUDT9-H fusion protein was stabilized with lysis buffer containing 0.5% n-dodecyl -β-d-maltoside (DDM), and wash buffer containing 0.025% DDM in size-exclusion chromatography system, and finally the NUDT9-H with high purity was obtained after cleaved by thrombin (1 U/2 mg fusion protein) for 24 h.
CONCLUSIONS
Due to the poor stability of NUDT9-H, it is necessary to add DDM in extraction and purification buffer to stabilize the conformation of NUDT9-H, so as to increase its yields and purity.
Escherichia coli
;
genetics
;
Glucosides
;
chemistry
;
Humans
;
Protein Domains
;
Protein Stability
;
Pyrophosphatases
;
chemistry
;
genetics
;
isolation & purification
;
Recombinant Fusion Proteins
;
chemistry
;
isolation & purification
;
TRPM Cation Channels
;
chemistry
;
isolation & purification
;
Thrombin
;
metabolism
2.Preparation of anti-hCG antibody-like molecule by using a RAD peptide display system.
Mengwen LIU ; Mei WANG ; Qiong WANG ; Huawei XIN
Chinese Journal of Biotechnology 2019;35(5):871-879
By using an RAD peptide display system derived from the ATPase domain of recombinase RadA of Pyrococcus furiosus, an anti-hCG antibody-like molecule was prepared by grafting an hCG-binding peptide to the RAD scaffold. After linking to sfGFP gene, a gene of hCG peptide-grafted RAD was synthesized and cloned into a bacterial expression vector (pET30a-RAD/hCGBP-sfGFP). The vector was transformed into Escherichia coli, and expression of the fusion protein was induced. After isolation and purification of the fusion protein, its binding affinity and specificity to hCG were determined by using a process of immunoabsorption followed by GFP fluorescence measurement. A comparison of hCG-binding activity with a similarly grafted single-domain antibody based on a universal scaffold was performed. The measurement of hCG-binding affinity and specificity revealed that the grafted RAD has an optimally high binding affinity and specificity to hCG, which are better than the grafted single-domain antibody. Moreover, the affinity and specificity of grafted RAD molecule are comparable to those of a commercial monoclonal antibody. In addition, the hCG-binding peptide-grafted RAD molecule has a relatively high biochemical stability, making it a good substitute for antibody with potential application.
Antibodies, Monoclonal
;
chemistry
;
isolation & purification
;
metabolism
;
Antibody Specificity
;
DNA-Binding Proteins
;
genetics
;
metabolism
;
Escherichia coli
;
genetics
;
Escherichia coli Proteins
;
metabolism
;
Humans
;
Peptides
;
Recombinant Fusion Proteins
;
genetics
;
metabolism
3.Quantitative specific detection of Staphylococcus aureus based on recombinant lysostaphin and ATP bioluminescence.
Yuyuan LI ; Zhiqiang MI ; Xiaoping AN ; Yusen ZHOU ; Yigang TONG
Chinese Journal of Biotechnology 2014;30(8):1283-1290
Quantitative specific detection of Staphylococcus aureus is based on recombinant lysostaphin and ATP bioluminescence. To produce recombinant lysostaphin, the lysostaphin gene was chemically synthesized and inserted it into prokaryotic expression vector pQE30, and the resulting expression plasmid pQE30-Lys was transformed into E. coli M15 for expressing lysostaphin with IPTG induction. The recombinant protein was purified by Ni(2+)-NTA affinity chromatography. Staphylococcus aureus was detected by the recombinant lysostaphin with ATP bioluminescence, and plate count method. The results of the two methods were compared. The recombinant lysostaphin was successfully expressed, and a method of quantitative specific detection of S. aureus has been established, which showed a significant linear correlation with the colony counting. The detection method developed has good perspective to quantify S. aureus.
Adenosine Triphosphate
;
chemistry
;
Chromatography, Affinity
;
Escherichia coli
;
Luminescent Measurements
;
methods
;
Lysostaphin
;
chemistry
;
Recombinant Proteins
;
chemistry
;
Staphylococcus aureus
;
isolation & purification
4.Expression of Translationally Controlled Tumor Protein (TCTP) Gene of Dirofilaria immitis Guided by Transcriptomic Screening.
Yan FU ; Jingchao LAN ; Xuhang WU ; Deying YANG ; Zhihe ZHANG ; Huaming NIE ; Rong HOU ; Runhui ZHANG ; Wanpeng ZHENG ; Yue XIE ; Ning YAN ; Zhi YANG ; Chengdong WANG ; Li LUO ; Li LIU ; Xiaobin GU ; Shuxian WANG ; Xuerong PENG ; Guangyou YANG
The Korean Journal of Parasitology 2014;52(1):21-26
Dirofilaria immitis (heartworm) infections affect domestic dogs, cats, and various wild mammals with increasing incidence in temperate and tropical areas. More sensitive antibody detection methodologies are required to diagnose asymptomatic dirofilariasis with low worm burdens. Applying current transcriptomic technologies would be useful to discover potential diagnostic markers for D. immitis infection. A filarial homologue of the mammalian translationally controlled tumor protein (TCTP) was initially identified by screening the assembled transcriptome of D. immitis (DiTCTP). A BLAST analysis suggested that the DiTCTP gene shared the highest similarity with TCTP from Loa loa at protein level (97%). A histidine-tagged recombinant DiTCTP protein (rDiTCTP) of 40 kDa expressed in Escherichia coli BL21 (DE3) showed immunoreactivity with serum from a dog experimentally infected with heartworms. Localization studies illustrated the ubiquitous presence of rDiTCTP protein in the lateral hypodermal chords, dorsal hypodermal chord, muscle, intestine, and uterus in female adult worms. Further studies on D. immitis-derived TCTP are warranted to assess whether this filarial protein could be used for a diagnostic purpose.
Animal Structures/chemistry
;
Animals
;
Antibodies, Helminth/blood
;
Antigens, Helminth/chemistry/*genetics/immunology/*isolation & purification
;
Cloning, Molecular
;
Dirofilaria immitis/chemistry/*genetics/immunology
;
Disease Models, Animal
;
Dogs
;
Escherichia coli/genetics
;
Gene Expression
;
Molecular Sequence Data
;
Molecular Weight
;
Recombinant Fusion Proteins/chemistry/genetics/immunology/isolation & purification
;
Sequence Analysis, DNA
;
Tumor Markers, Biological/chemistry/*genetics/immunology/*isolation & purification
5.Gene Cloning, Expression and Immunogenicity of the Protective Antigen Subolesin in Dermacentor silvarum.
Yonghong HU ; Hua ZENG ; Jincheng ZHANG ; Duo WANG ; Dongming LI ; Tiantian ZHANG ; Shujie YANG ; Jingze LIU
The Korean Journal of Parasitology 2014;52(1):93-97
Subolesin (4D8), the ortholog of insect akirins, is a highly conserved protective antigen and thus has the potential for development of a broad-spectrum vaccine against ticks and mosquitoes. To date, no protective antigens have been characterized nor tested as candidate vaccines against Dermacentor silvarum bites and transmission of associated pathogens. In this study, we cloned the open reading frame (ORF) of D. silvarum 4D8 cDNA (Ds4D8), which consisted of 498 bp encoding 165 amino acid residues. The results of sequence alignments and phylogenetic analysis demonstrated that D. silvarum 4D8 (Ds4D8) is highly conserved showing more than 81% identity of amino acid sequences with those of other hard ticks. Additionally, Ds4D8 containing restriction sites was ligated into the pET-32(a+) expression vector and the recombinant plasmid was transformed into Escherichia coli rosetta. The recombinant Ds4D8 (rDs4D8) was induced by isopropyl beta-D-thiogalactopyranoside (IPTG) and purified using Ni affinity chromatography. The SDS-PAGE results showed that the molecular weight of rDs4D8 was 40 kDa, which was consistent with the expected molecular mass considering 22 kDa histidine-tagged thioredoxin (TRX) protein from the expression vector. Western blot results showed that rabbit anti-D. silvarum serum recognized the expressed rDs4D8, suggesting an immune response against rDs4D8. These results provided the basis for developing a candidate vaccine against D. silvarum ticks and transmission of associated pathogens.
Animals
;
Antigens/chemistry/genetics/*immunology/isolation & purification
;
Arthropod Proteins/chemistry/genetics/*immunology/isolation & purification
;
Chromatography, Affinity
;
Cloning, Molecular
;
Cluster Analysis
;
Conserved Sequence
;
Dermacentor/*genetics
;
Electrophoresis, Polyacrylamide Gel
;
Escherichia coli/genetics
;
Gene Expression
;
Humans
;
Molecular Sequence Data
;
Molecular Weight
;
Phylogeny
;
Recombinant Proteins/chemistry/genetics/immunology/isolation & purification
;
Sequence Analysis, DNA
;
Sequence Homology, Amino Acid
6.Development of Enzyme-Linked Immunosorbent Assays Using 2 Truncated ORF2 Proteins for Detection of IgG Antibodies Against Hepatitis E Virus.
Reza TAHERKHANI ; Manoochehr MAKVANDI ; Fatemeh FARSHADPOUR
Annals of Laboratory Medicine 2014;34(2):118-126
BACKGROUND: Without appropriate culture systems for hepatitis E virus (HEV), sufficient natural viral proteins are difficult to generate for use in serological tests. Therefore, it is important to produce large amounts of HEV recombinant proteins in an economical way. The present study developed ELISAs using 2 truncated forms of the HEV open reading frame (ORF) 2 protein in order to detect anti-HEV IgG in serum samples. METHODS: Two truncated forms of the ORF2 protein were expressed in Escherichia coli and were purified by Ni2+-chelate-affinity chromatography (Qiagen, Germany). Two ELISAs were developed using these proteins and were compared with DIA.PRO HEV IgG ELISA kit (DIA.PRO. Italy) in 220 serum samples. RESULTS: High yields of the target proteins were obtained through codon optimization. The concentration and purity of the proteins were improved with Amicon filters (EMD Millipore, USA). Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and Western blotting analysis of the resultant proteins showed a protein band of approximately 60 kDa corresponding to ORF2.1 (amino acids 112-660) and a protein band of approximately 55 kDa corresponding to ORF2.2 (amino acids 112-607). Positive agreement, negative agreement, and concordance of the 2 in-house ELISAs compared with DIA.PRO HEV IgG ELISA kit were 87%, 99.5%, and 98.1%, respectively (kappa=0.899, P=0.625). CONCLUSIONS: The newly developed ELISAs are useful for detecting anti-HEV IgG in serum samples and are highly concordant with DIA.PRO HEV IgG ELISA kit.
Amino Acid Sequence
;
Antibodies/*blood
;
*Enzyme-Linked Immunosorbent Assay
;
Escherichia coli/metabolism
;
Hepatitis E virus/*metabolism
;
Humans
;
Immunoglobulin G/*blood
;
Molecular Sequence Data
;
Recombinant Proteins/biosynthesis/immunology/isolation & purification
;
Sequence Alignment
;
Viral Proteins/chemistry/*immunology/metabolism
7.Optimization of expression and purification of recombinant Salvia miltiorrhiza WRKY1 protein in Escherichia coli.
Yu-Zhong LIU ; Ye SHEN ; Qi-Xian RONG ; Wen-Yan WU ; Rui-Bo LI ; Zhi-Gang WU ; Min CHEN
China Journal of Chinese Materia Medica 2014;39(7):1214-1219
WRKY transcription factor is one of the Zinc finger proteins which contains a highly conserved WRKY domain and is a family of the plant-specific transcription factor. The plasmid pET28a-SmWRKY1 harboring Salvia miltiorrhiza WRKY1 (SmWRKY1) gene was successfully transformed and expressed in Escherichia coli BL21 (DE3). The conditions on protein expression of SmWRKY1 in E. coli, including induction duration, temperature, IPTG concentration and the E. coli concentration were optimized. The results showed that the highest protein expression of SmWRKY1 was obtained at 24 hours after the E. coli was cultured in the presence of 0.2 mol x L(-1) IPTG at 20 degrees C with A600 values of 1.0-1.5. This recombinant histidine-tagged protein was expressed at 2.454 g x L(-1) as inclusion body, which was first extracted using urea, and then purified by Ni2+ affinity chromatography and identified by SDS-PAGE. The expression of SmWRKY1 in E. coli was further confirmed by western blotting analysis.
Blotting, Western
;
Cloning, Molecular
;
DNA-Binding Proteins
;
chemistry
;
genetics
;
isolation & purification
;
metabolism
;
Electrophoresis, Polyacrylamide Gel
;
Escherichia coli
;
chemistry
;
genetics
;
metabolism
;
Molecular Weight
;
Plant Proteins
;
chemistry
;
genetics
;
isolation & purification
;
metabolism
;
Recombinant Proteins
;
chemistry
;
genetics
;
isolation & purification
;
metabolism
;
Salvia miltiorrhiza
;
genetics
8.Gene sequence analysis and prokaryotic expression of sigmaB protein of Muscovy duck reovirus YB strain.
Xiao-Ping WU ; Hong-Xing ZHANG ; Yi-Jian WU ; Dian-Lin HAN ; Shao WANG ; Bao-Cheng WU ; Yi-Fan HUANG
Chinese Journal of Virology 2013;29(2):185-191
Muscovy ducks reovirus (DRV) is an important pathogen with a high mortality rate in Muscovy ducks, the researches in the test and the immunity were useful for the prevention and control of DRV infection. In this study, the S3 genes of the three Fujian DRVs were cloned by RT-PCR and sequencing technology. It was found that DRV-YH and YJL were close to avian reovirus (ARV) in the genetic distance, with high identities ranged from 94. 6% to 98. 9%, however, the identities of DRV-YB strain and reference ARV strains in the S3 gene were only 60.6% - 61.7%. The expression vector pET-30a-S3 harboring DRV YB strain S3 gene was constructed and transformed into E. coli BL21, and then the fusion sigmaB protein expression was induced with IPTG. The SDS-PAGE of the expressed products indicated that the fusion protein of approximately 42ku in molecular weight was expressed highly in inclusion body, and made up 67. 7% of the total proteins. The most efficient concentration of IPTG and inducing time were 0. 1 mM and 5h respectively, while the best temperature for expression was 37 degrees C. After purification with the Ni2+ affinity chromatography, the fusion sigmaB protein was 93% of the total proteins, and the purified protein amounted to 0. 86g/L. The Western blot analysis showed that the fusion aB protein was recognized specifically by the antiserum against DRV, confirming that the recombinant fusion protein had good immunoreactivity.
Amino Acid Sequence
;
Animals
;
Capsid Proteins
;
chemistry
;
genetics
;
metabolism
;
Escherichia coli
;
genetics
;
metabolism
;
Gene Expression
;
Molecular Sequence Data
;
Orthoreovirus, Avian
;
chemistry
;
classification
;
genetics
;
isolation & purification
;
Phylogeny
;
Poultry Diseases
;
virology
;
RNA-Binding Proteins
;
chemistry
;
genetics
;
metabolism
;
Recombinant Proteins
;
genetics
;
metabolism
;
Reoviridae Infections
;
veterinary
;
virology
;
Sequence Analysis
;
Sequence Homology, Amino Acid
9.Expression analysis of glycosyltransferase BcUGT1 from Bupleurum chinense DC. and its expression in E. coli and the target protein purification.
Yun-Wen TAO ; Jie-Sen XU ; Jian-He WEI ; Jing SUN ; Yan-Hong XU ; Xin YANG ; Yan ZHANG ; Juan LIU ; Chun SUI
Acta Pharmaceutica Sinica 2013;48(8):1345-1352
The ORF sequence of glycosyltransferase gene BcUGT1 cloned from Bupleurum chinense DC. was analyzed and its three dimentional structure was predicted. Using qRT-PCR method, the expression characteristics of BcUGT1 after methyl jasmonate (MeJA) induction and in different plant tissues were investigated. The results showed that BcUGT1 may be involved in saikosaponin biosynthesis in B. chinense. Thereafter, the recombinant vectors of BcUGT1 were constructed for its expression in E. coli. The target protein was successfully expressed and purified. In the present study, three vectors, pRSET-A, pET-28a (+) and pET-30a (+), and three isolates of E. coli, BL21 (DE3) plysS, BL21A1 and BL21-CodonPlus (DE3)-RIPL were used under different induction conditions, such as different concentrations and during times of inducers (L-arabinose and IPTG) and different inducing temperatures. The results showed that in the condition of 0.5 or 1 mmol x L(-1) IPTG, 16 degrees C, 20 h, target protein expressed in BL21-CodonPlus (DE3)-RIPL with pET-28a (+) or pET-30a (+) as vector. Using PrepEase His-tagged protein purification kit, the target protein was purified. The present work will be helpful for follow-up bio-function analysis of BcUGT1.
Amino Acid Sequence
;
Base Sequence
;
Bupleurum
;
chemistry
;
Cloning, Molecular
;
DNA, Complementary
;
genetics
;
DNA, Plant
;
genetics
;
Escherichia coli
;
genetics
;
metabolism
;
Genetic Vectors
;
Glycosyltransferases
;
genetics
;
isolation & purification
;
metabolism
;
Oleanolic Acid
;
analogs & derivatives
;
biosynthesis
;
Open Reading Frames
;
genetics
;
Phylogeny
;
Plants, Medicinal
;
chemistry
;
Protein Structure, Secondary
;
Recombinant Fusion Proteins
;
genetics
;
metabolism
;
Saponins
;
biosynthesis
10.Dye decolorization by bacterial laccase Lac15.
Wei FANG ; Zemin FANG ; Fei CHANG ; Hui PENG ; Xuecheng ZHANG ; Yazhong XIAO
Chinese Journal of Biotechnology 2012;28(8):973-980
We screened for laccase from a marine metagenomic library and obtained a bacterial laccase Lac15 and studied its decolorization ability. Using synthetic azo dyes and anthraquinonic dyes as substrates, we investigated the dye decolorization ability of recombinant Lac15 (rLac15). The purified rLac15 had better decolorization ability towards the azo dyes than the anthraquinonic dyes. When incubated at 45 degrees C and pH 8.5 for 1 h with methylsyringate as the mediator, 20 U/L of rLac15 could decolorize 95% of 100 micromol/L Acid Red 6B (AR-6B), 93% of Reactive Blue 194 (M-2GE), 76% of Reactive Brilliant Orange (K-7R) and 66% of Reactive Blue 171 (KE-R). The decolorization ability of rLac15 decreased with the dye concentration increasing. However, more than 80% of M-2GE and AR-6B were degraded even when the dye concentration was up to 200 micromol/L. At room temperature, rLac51 exhibited significant decolorization ability, with 96% of AR-6B, 86% of M-2GE, 66% of K-7R and 66% of KE-Rdegraded within 24 h at 25 degrees C. rLac15 has the potential of industrial applications.
Anthraquinones
;
isolation & purification
;
Azo Compounds
;
isolation & purification
;
Bacteria
;
enzymology
;
isolation & purification
;
Biodegradation, Environmental
;
Coloring Agents
;
isolation & purification
;
Escherichia coli
;
genetics
;
metabolism
;
Laccase
;
genetics
;
metabolism
;
Recombinant Proteins
;
genetics
;
metabolism
;
Seawater
;
microbiology
;
Waste Disposal, Fluid
;
methods
;
Waste Water
;
chemistry

Result Analysis
Print
Save
E-mail