1.Prediction of superantigen active sites and clonal expression of staphylococcal enterotoxin-like W.
Yu Hua YANG ; Xin KU ; Ya Nan GONG ; Fan Liang MENG ; Dong bo BU ; Ya Hui GUO ; Xiao Yue WEI ; Li Jin LONG ; Jia Ming FAN ; Mao Jun ZHANG ; Jian Zhong ZHANG ; Xiao Mei YAN
Chinese Journal of Epidemiology 2023;44(4):629-635
Objective: The docking and superantigen activity sites of staphylococcal enterotoxin-like W (SElW) and T cell receptor (TCR) were predicted, and its SElW was cloned, expressed and purified. Methods: AlphaFold was used to predict the 3D structure of SElW protein monomers, and the protein models were evaluated with the help of the SAVES online server from ERRAT, Ramachandran plot, and Verify_3D. The ZDOCK server simulates the docking conformation of SElW and TCR, and the amino acid sequences of SElW and other serotype enterotoxins were aligned. The primers were designed to amplify selw, and the fragment was recombined into the pMD18-T vector and sequenced. Then recombinant plasmid pMD18-T was digested with BamHⅠand Hind Ⅲ. The target fragment was recombined into the expression plasmid pET-28a(+). After identification of the recombinant plasmid, the protein expression was induced by isopropyl-beta-D- thiogalactopyranoside. The SElW expressed in the supernatant was purified by affinity chromatography and quantified by the BCA method. Results: The predicted three-dimensional structure showed that the SElW protein was composed of two domains, the amino-terminal and the carboxy-terminal. The amino-terminal domain was composed of 3 α-helices and 6 β-sheets, and the carboxy-terminal domain included 2 α-helices and 7 antiparallel β-sheets composition. The overall quality factor score of the SElW protein model was 98.08, with 93.24% of the amino acids having a Verify_3D score ≥0.2 and no amino acids located in disallowed regions. The docking conformation with the highest score (1 521.328) was selected as the analysis object, and the 19 hydrogen bonds between the corresponding amino acid residues of SElW and TCR were analyzed by PyMOL. Combined with sequence alignment and the published data, this study predicted and found five important superantigen active sites, namely Y18, N19, W55, C88, and C98. The highly purified soluble recombinant protein SElW was obtained with cloning, expression, and protein purification. Conclusions: The study found five superantigen active sites in SElW protein that need special attention and successfully constructed and expressed the SElW protein, which laid the foundation for further exploration of the immune recognition mechanism of SElW.
Humans
;
Enterotoxins/genetics*
;
Superantigens/genetics*
;
Catalytic Domain
;
Selenoprotein W/metabolism*
;
Receptors, Antigen, T-Cell
2.Construction and function of Glypican-3-targeted fourth-generation chimeric antigen receptor T cells (secreting IL-7 and CCL19).
Wanli HUANG ; Yu LIU ; Yaodi HU ; Jimin GAO
Chinese Journal of Biotechnology 2020;36(5):979-991
Adoptive immunotherapy based on chimeric antigen receptor-modified T cells (CAR-T) is one of the most promising strategies to treat malignant tumors, but its application in solid tumors is still limited. Glypican-3 (GPC3) is a meaningful diagnostic, therapeutic, and prognostic biomarker for hepatocellular carcinoma (HCC). The second/third generation GPC3-targeted CAR-T cells are generated to treat HCC. In order to improve the therapeutic effect, we constructed a fourth-generation lentiviral vector to express GPC3 CAR, human interleukin-7 (IL-7) and CCL19. Then the lentiviral vector and packaging plasmids were co-transfected into HEK293T cells to generate CAR lentiviral particles. Human T lymphocyte cells were transduced with CAR lentiviral to develop the fourth-generation GPC3-targeted CAR-T cells (GPC3-BBZ-7×19). In vitro, we used cell counting, transwell assay, luciferase bioluminescence assay and flow cytometry to compare the proliferation, chemotaxis, cytotoxicity and subtype distribution between GPC3-BBZ-7×19 CAR-T cells and the second generation GPC3-targeted CAR-T cells (GPC3-BBZ). In vivo, we established GPC3-positive HCC xenograft model in immunodeficient mice, then untransduced T cells (non-CAR-T) or GPC3-BBZ-7×19 CAR-T cells were injected. Tumor growth in mice was observed by bioluminescence imaging. Results showed that compared with GPC3-BBZ CAR-T, GPC3-BBZ-7×19 CAR-T cells had stronger proliferation, chemotactic ability, and higher composition of memory stem T cells (Tscm) (P values<0.05). However, there were no significant difference in cytotoxicity and cytokine secretion between them. In addition, GPC3-BBZ-7×19 CAR-T cells could significantly eliminate GPC3-positive HCC xenografts established in immunodeficient mice. Therefore, the fourth-generation GPC3-targeted CAR-T cells (secreting IL-7 and CCL19) are expected to be more durable and effective against HCC and produce tumor-specific memory, to provide a preclinical research basis for future clinical trials.
Animals
;
Carcinoma, Hepatocellular
;
Cell Line, Tumor
;
Chemokine CCL19
;
metabolism
;
Glypicans
;
metabolism
;
HEK293 Cells
;
Humans
;
Interleukin-7
;
metabolism
;
Lentivirus
;
genetics
;
Liver Neoplasms
;
Mice
;
Receptors, Chimeric Antigen
;
metabolism
;
T-Lymphocytes
;
metabolism
;
Xenograft Model Antitumor Assays
3.Transcriptome and Regulatory Network Analyses of CD19-CAR-T Immunotherapy for B-ALL.
Qiong ZHANG ; Hui HU ; Si-Yi CHEN ; Chun-Jie LIU ; Fei-Fei HU ; Jianming YU ; Yaohui WU ; An-Yuan GUO
Genomics, Proteomics & Bioinformatics 2019;17(2):190-200
Chimeric antigen receptor (CAR) T cell therapy has exhibited dramatic anti-tumor efficacy in clinical trials. In this study, we reported the transcriptome profiles of bone marrow cells in four B cell acute lymphoblastic leukemia (B-ALL) patients before and after CD19-specific CAR-T therapy. CD19-CAR-T therapy remarkably reduced the number of leukemia cells, and three patients achieved bone marrow remission (minimal residual disease negative). The efficacy of CD19-CAR-T therapy on B-ALL was positively correlated with the abundance of CAR and immune cell subpopulations, e.g., CD8 T cells and natural killer (NK) cells, in the bone marrow. Additionally, CD19-CAR-T therapy mainly influenced the expression of genes linked to cell cycle and immune response pathways, including the NK cell mediated cytotoxicity and NOD-like receptor signaling pathways. The regulatory network analyses revealed that microRNAs (e.g., miR-148a-3p and miR-375), acting as oncogenes or tumor suppressors, could regulate the crosstalk between the genes encoding transcription factors (TFs; e.g., JUN and FOS) and histones (e.g., HIST1H4A and HIST2H4A) involved in CD19-CAR-T therapy. Furthermore, many long non-coding RNAs showed a high degree of co-expression with TFs or histones (e.g., FOS and HIST1H4B) and were associated with immune processes. These transcriptome analyses provided important clues for further understanding the gene expression and related mechanisms underlying the efficacy of CAR-T immunotherapy.
Adult
;
Antigens, CD19
;
metabolism
;
Bone Marrow
;
metabolism
;
CD8-Positive T-Lymphocytes
;
immunology
;
Female
;
Gene Expression Regulation, Leukemic
;
Gene Regulatory Networks
;
Humans
;
Immunotherapy, Adoptive
;
Male
;
MicroRNAs
;
genetics
;
metabolism
;
Middle Aged
;
Precursor Cell Lymphoblastic Leukemia-Lymphoma
;
genetics
;
immunology
;
therapy
;
RNA, Long Noncoding
;
genetics
;
metabolism
;
Receptors, Antigen, T-Cell
;
Transcription Factors
;
metabolism
;
Transcriptome
;
genetics
4.High-affinity T cell receptors redirect cytokine-activated T cells (CAT) to kill cancer cells.
Synat KANG ; Yanyan LI ; Yifeng BAO ; Yi LI
Frontiers of Medicine 2019;13(1):69-82
Cytokine-activated T cells (CATs) can be easily expanded and are widely applied to cancer immunotherapy. However, the good efficacy of CATs is rarely reported in clinical applications because CATs have no or very low antigen specificity. The low-efficacy problem can be resolved using T cell antigen receptor-engineered CAT (TCR-CAT). Herein, we demonstrate that NY-ESO-1 HLA-A*02:01-specific high-affinity TCR (HAT)-transduced CATs can specifically kill cancer cells with good efficacy. With low micromolar range dissociation equilibrium constants, HAT-transduced CATs showed good specificity with no off-target killing. Furthermore, the high-affinity TCR-CATs delivered significantly better activation and cytotoxicity than the equivalent TCR-engineered T cells (TCR-Ts) in terms of interferon-γ and granzyme B production and in vitro cancer cell killing ability. TCR-CAT may be a very good alternative to the expensive TCR-T, which is considered an effective personalized cyto-immunotherapy.
Cell Line, Tumor
;
Cytokines
;
metabolism
;
Cytotoxicity, Immunologic
;
Genetic Engineering
;
HLA-A2 Antigen
;
metabolism
;
Humans
;
Immunotherapy, Adoptive
;
methods
;
Lymphocyte Activation
;
Receptors, Antigen, T-Cell
;
genetics
;
immunology
;
T-Lymphocytes
;
immunology
5.T-cell receptor-engineered T cells for cancer treatment: current status and future directions.
Yu PING ; Chaojun LIU ; Yi ZHANG
Protein & Cell 2018;9(3):254-266
T-cell receptor (TCR)-engineered T cells are a novel option for adoptive cell therapy used for the treatment of several advanced forms of cancer. Work using TCR-engineered T cells began more than two decades ago, with numerous preclinical studies showing that such cells could mediate tumor lysis and eradication. The success of these trials provided the foundation for clinical trials, including recent clinical successes using TCR-engineered T cells to target New York esophageal squamous cell carcinoma (NY-ESO-1). These successes demonstrate the potential of this approach to treat cancer. In this review, we provide a perspective on the current and future applications of TCR-engineered T cells for the treatment of cancer. Our summary focuses on TCR activation and both pre-clinical and clinical applications of TCR-engineered T cells. We also discuss how to enhance the function of TCR-engineered T cells and prolong their longevity in the tumor microenvironment.
Animals
;
Antigens, Neoplasm
;
immunology
;
metabolism
;
Humans
;
Neoplasms
;
immunology
;
metabolism
;
Receptors, Antigen, T-Cell
;
genetics
;
metabolism
;
T-Lymphocytes
;
immunology
;
metabolism
6.Increasing the safety and efficacy of chimeric antigen receptor T cell therapy.
Protein & Cell 2017;8(8):573-589
Chimeric antigen receptor (CAR) T cell therapy is a promising cancer treatment that has recently been undergoing rapid development. However, there are still some major challenges, including precise tumor targeting to avoid off-target or "on-target/off-tumor" toxicity, adequate T cell infiltration and migration to solid tumors and T cell proliferation and persistence across the physical and biochemical barriers of solid tumors. In this review, we focus on the primary challenges and strategies to design safe and effective CAR T cells, including using novel cutting-edge technologies for CAR and vector designs to increase both the safety and efficacy, further T cell modification to overcome the tumor-associated immune suppression, and using gene editing technologies to generate universal CAR T cells. All these efforts promote the development and evolution of CAR T cell therapy and move toward our ultimate goal-curing cancer with high safety, high efficacy, and low cost.
Cell Movement
;
immunology
;
Cell Proliferation
;
Gene Expression
;
Genetic Vectors
;
chemistry
;
metabolism
;
Humans
;
Immunotherapy, Adoptive
;
methods
;
Lymphocyte Activation
;
Lymphocytes, Tumor-Infiltrating
;
cytology
;
immunology
;
transplantation
;
Neoplasms
;
genetics
;
immunology
;
pathology
;
therapy
;
Patient Safety
;
Receptors, Antigen, T-Cell
;
chemistry
;
genetics
;
immunology
;
Recombinant Fusion Proteins
;
chemistry
;
genetics
;
immunology
;
Signal Transduction
;
Single-Chain Antibodies
;
chemistry
;
genetics
;
T-Lymphocytes
;
cytology
;
immunology
;
transplantation
;
Treatment Outcome
7.Marked Increase of Circulating Double-Negative gammadelta T Cells in a Patient With Hydroa Vacciniforme-Like Lymphoma.
Sang Yong SHIN ; Chang Hun PARK ; Duck CHO ; Hee Jin KIM ; Sun Hee KIM
Annals of Laboratory Medicine 2016;36(3):268-270
No abstract available.
Child, Preschool
;
Female
;
Flow Cytometry
;
Humans
;
Hydroa Vacciniforme/*diagnosis/pathology
;
Immunophenotyping
;
Lymphocytosis/complications
;
Lymphoma/*diagnosis
;
Receptors, Antigen, T-Cell, gamma-delta/genetics/*metabolism
;
STAT3 Transcription Factor/genetics/metabolism
;
Sequence Analysis, DNA
;
Skin/metabolism
;
T-Lymphocytes/*metabolism
9.The First Case Report of Composite Bone Marrow Involvement by Simultaneously Developed Peripheral T-Cell Lymphoma, Not Otherwise Specified, and Diffuse Large B-Cell Lymphoma.
Hyun Ki KIM ; Chan Jeoung PARK ; Seongsoo JANG ; Young Uk CHO ; Sang Hyuk PARK ; Jene CHOI ; Chan Sik PARK ; Jooryung HUH ; Young Hwa CHUNG ; Jung Hee LEE
Annals of Laboratory Medicine 2015;35(1):152-154
No abstract available.
Antibodies, Monoclonal, Murine-Derived/therapeutic use
;
Antineoplastic Combined Chemotherapy Protocols/therapeutic use
;
B-Cell-Specific Activator Protein/metabolism
;
Bone Marrow/metabolism/*pathology
;
Cyclophosphamide/therapeutic use
;
Doxorubicin/therapeutic use
;
Endoscopy, Digestive System
;
Female
;
Gene Rearrangement, gamma-Chain T-Cell Antigen Receptor
;
Genetic Loci
;
Humans
;
Liver/metabolism/pathology
;
Lymphocytes/cytology/immunology
;
Lymphoma, Large B-Cell, Diffuse/complications/*diagnosis/drug therapy
;
Lymphoma, T-Cell, Peripheral/complications/*diagnosis/drug therapy
;
Middle Aged
;
Prednisone/therapeutic use
;
Receptors, Antigen, T-Cell, gamma-delta/genetics
;
Tomography, X-Ray Computed
;
Vincristine/therapeutic use
10.Simultaneous Occurrence of Angioimmunoblastic T-cell Lymphoma and Plasma Cell Leukemia.
Mi Ae JANG ; Seung Tae LEE ; Hee Jin KIM ; Seokjin KIM ; Sun Hee KIM
Annals of Laboratory Medicine 2015;35(1):149-151
No abstract available.
Aged
;
Humans
;
Leukemia, Plasma Cell/complications/*diagnosis/pathology
;
Leukocytosis
;
Lymph Nodes/pathology
;
Lymphoma, T-Cell/complications/*diagnosis/pathology
;
Male
;
Paraproteinemias/complications
;
Polymerase Chain Reaction
;
Receptors, Antigen, T-Cell, gamma-delta/genetics/metabolism
;
Tomography, X-Ray Computed

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