1.Advances on BTB protein ubiquitination mediated plant development and stress response.
Tongtong LÜ ; Wenhui YAN ; Yan LIANG ; Yin DING ; Qingxia YAN ; Jinhua LI
Chinese Journal of Biotechnology 2024;40(1):63-80
The BTB (broad-complex, tramtrack, and bric-à-brac) domain is a highly conserved protein interaction motif in eukaryotes. They are widely involved in transcriptional regulation, protein degradation and other processes. Recently, an increasing number of studies have shown that these genes play important roles in plant growth and development, biotic and abiotic stress processes. Here, we summarize the advances of these proteins ubiquitination-mediated development and abiotic stress responses in plants based on the protein structure, which may facilitate the study of this type of gene in plants.
Eukaryota
;
Plant Development/genetics*
;
Proteolysis
;
Ubiquitination
2.Advances in the preclinical and clinical research of proteolysis targeting chimera.
Chinese Journal of Biotechnology 2023;39(9):3615-3627
Proteolysis targeting chimera (PROTAC) refers to heterobifunctional small molecules that can simultaneously bind an E3 ubiquitin ligase and a target protein, enabling specific degradation of the target protein with the aid of the ubiquitin proteasome system. At present, most PROTAC drugs are in the clinical trial stage, and the ligands are mainly non-covalent compounds. PROTAC drugs have the advantage of overcoming drug resistance and degrading "undruggable" target proteins, but non-covalent ligands could lead to the hook effect that undermines drug efficacy. With its own advantages, covalent ligands can avoid the occurrence of this phenomenon, which is of great help to the development of PROTAC. This review summarizes the progress in preclinical and clinical research and application of PROTAC molecules targeting three different classes of protein targets, including intranuclear, transmembrane, and cytosolic proteins. We also offer perspective discussions to provide research ideas and references for the future development of PROTAC.
Proteolysis
;
Proteolysis Targeting Chimera
;
Proteasome Endopeptidase Complex/metabolism*
;
Ubiquitin-Protein Ligases/metabolism*
;
Proteins/metabolism*
;
Ligands
3.Advances in targeted delivery of proteolysis targeting chimeras in cancer therapy.
Xiaobo WU ; Jie ZHAO ; Yuan GAO ; Qingxin YAO ; Jianjun XIE
Chinese Journal of Biotechnology 2023;39(9):3628-3643
Small-molecule anticancer drugs inhibited tumor growth based on targeted inhibition of specific proteins, while most of oncogenic proteins are "undruggable". Proteolysis targeting chimeras (PROTAC) is an attractive and general strategy for treating cancer based on targeted degradation of oncogenic proteins. This review briefly describes the peptide-based PTOTAC and small molecule-based PROTAC. Subsequently, we summarize the development of targeted delivery of PROTAC, such as targeting molecule-mediated targeted delivery of PROTAC, nanomaterial-mediated targeted delivery of PROTAC and controllable activation of small-molecular PROTAC prodrug. Such strategies show potential application in improving tumor selectivity, overcoming off-target effect and reducing biotoxicity. At the end, the druggability of PROTAC is prospected.
Humans
;
Proteolysis Targeting Chimera
;
Nanostructures
;
Neoplasms/drug therapy*
;
Proteolysis
4.Application of PROTACs in Hematological Malignancies--Review.
Journal of Experimental Hematology 2023;31(6):1921-1924
Proteolysis-targeting chimeras (PROTACs) are heterobifunctional small molecules by utilizing the ubiquitin proteasome system (UPS) to degrade proteins of interest. PROTACs have exhibited unprecedented efficacy and specificity in degrading various oncogenic proteins because of their unique mechanism of action, ability to target "undruggable" and mutant proteins. A series of PROTACs have been developed to degrade multiple key protein targets for the treatment of hematologic malignancy. Notably, PROTACs that target BCL-XL, IRAK4, STAT3 and BTK have entered clinical trials. The known PROTACs that have the potential to be used to treat various hematological malignancies are systematically summarized in this review.
Humans
;
Hematologic Neoplasms/drug therapy*
;
Proteasome Endopeptidase Complex/metabolism*
;
Ubiquitin-Protein Ligases/metabolism*
;
Proteolysis Targeting Chimera
6.Research Progress of Proteolysis Targeting Chimeria in NSCLC Therapy.
Lin JIANG ; Jingbo ZHANG ; Jiaqi HU ; Haixiang QI ; Heng XU
Chinese Journal of Lung Cancer 2022;25(7):477-481
Proteolysis targeting chimeria (PROTAC) degrades target proteins by utilizing the ubiquitin-proteasome pathway, subverting the concept of traditional small molecule inhibitors. Among the common mutation targets of non-small cell lung cancer (NSCLC), PROTAC technology has successfully achieved the effective degradation of kirsten rat sarcoma viral oncogene homolog (KRAS), epidermal growth factor receptor (EGFR), anaplastic lymphoma kinase (ALK ) and other proteins in preclinical studies. PROTAC drugs with their unique event-driven advantages, are expected to overcome acquired drug resistance caused by small molecule inhibitors and show good therapeutic potential for undruggable targets, thereby providing a new strategy for the treatment of NSCLC.
.
Carcinoma, Non-Small-Cell Lung/pathology*
;
Humans
;
Lung Neoplasms/pathology*
;
Mutation
;
Protein Kinase Inhibitors/therapeutic use*
;
Proteolysis
;
Proto-Oncogene Proteins p21(ras)/genetics*
7.Advances of targeted protein degradation technology and its applications in diseases therapy.
Shuping CHEN ; Han YANG ; Jinlu JIANG ; Siyuan YU ; Tingdong LI ; Shengxiang GE
Chinese Journal of Biotechnology 2021;37(11):3915-3932
Targeted protein degradation (TPD) technology facilitates specific and efficient degradation of disease-related proteins through hijacking the two major protein degradation systems in mammalian cells: ubiquitin-proteasome system and lysosome pathway. Compared with traditional small molecule-inhibitors, TPD-based drugs exhibit the characteristics of a broader target spectrum. Compared with techniques interfere with protein expression on the gene and mRNA level, TPD-based drugs are target-specific, efficaciously rapid, and not constrained by post-translational modification of proteins. In the past 20 years, various TPD-based technologies have been developed. Most excitingly, two TPD-based therapeutic drugs have been approved by FDA for phase Ⅰ clinical trials in 2019. Despite of the early stage characteristics and various obstructions of the TPD technology, it could serve as a powerful tool for the development of novel drugs. This review summarizes the advances of different degradation systems based on TPD technologies and their applications in disease therapy. Moreover, the advantages and challenges of various technologies were discussed systematically, with the aim to provide theoretical guidance for further application of TPD technologies in scientific research and drug development.
Animals
;
Proteasome Endopeptidase Complex/metabolism*
;
Protein Processing, Post-Translational
;
Proteins/metabolism*
;
Proteolysis
;
Technology
8.Methylmercury toxic mechanism related to protein degradation and chemokine transcription.
Jin-Yong LEE ; Gi-Wook HWANG ; Akira NAGANUMA ; Masahiko SATOH
Environmental Health and Preventive Medicine 2020;25(1):30-30
Methylmercury is an environmental pollutant that causes neurotoxicity. Recent studies have reported that the ubiquitin-proteasome system is involved in defense against methylmercury toxicity through the degradation of proteins synthesizing the pyruvate. Mitochondrial accumulation of pyruvate can enhance methylmercury toxicity. In addition, methylmercury exposure induces several immune-related chemokines, specifically in the brain, and may cause neurotoxicity. This summary highlights several molecular mechanisms of methylmercury-induced neurotoxicity.
Animals
;
Chemokines
;
drug effects
;
metabolism
;
Humans
;
Methylmercury Compounds
;
toxicity
;
Mice
;
Neurotoxins
;
toxicity
;
Proteolysis
;
drug effects
;
Rats
;
Saccharomyces cerevisiae
;
drug effects
9.Research Progress of the Roles of Ubiquitination/Deubiquitination in Androgen Receptor Abnormalities and Prostate Cancer.
Wei-Yu ZHANG ; Jian-Hua ZHOU ; Huan-Rui WANG ; Qing MU ; Qi WANG ; Ke-Xin XU ; Tao XU ; Hao HU
Acta Academiae Medicinae Sinicae 2020;42(2):251-256
Ubiquitin is a small molecule protein consisting of 76 amino acids,widely found in eukaryotic cells. The process by which ubiquitin binding to a specific protein is called ubiquitination. Deubiquitination is the reversed process of ubiquitination. Ubiquitination stimulates downstream signal,including complex assembly,protein conformation and activity changes,proteolysis,autophagy,guilt,chromatin remodeling,and DNA repair. More than 80% of eukaryotic protein degradation is mediated by the ubiquitination system,and ubiquitin-dependent proteolysis is an extremely complex process involving many biomolecular processes. By regulating protein homeostasis,ubiquitination can also regulate a variety of biological processes including cell cycle,cell proliferation,and apoptosis,which are closely related to tumorigenesis and progression. Many abnormalities of androgen receptor (AR) including AR gene amplification,mutation,shear mutation,and AR activity enhancement are closely related to prostate cancer progression. In particular,prostate cancer progression is regulated by the ubiquitination/deubiquitination processes. This article summarizes the recent research advances in the roles of ubiquitination/deubiquitination in AR abnormalities and prostate cancer.
Cell Line, Tumor
;
Humans
;
Male
;
Prostatic Neoplasms
;
metabolism
;
pathology
;
Proteolysis
;
Receptors, Androgen
;
metabolism
;
Ubiquitination
10.TRIM35 mediates protection against influenza infection by activating TRAF3 and degrading viral PB2.
Nan SUN ; Li JIANG ; Miaomiao YE ; Yihan WANG ; Guangwen WANG ; Xiaopeng WAN ; Yuhui ZHAO ; Xia WEN ; Libin LIANG ; Shujie MA ; Liling LIU ; Zhigao BU ; Hualan CHEN ; Chengjun LI
Protein & Cell 2020;11(12):894-914
Tripartite motif (TRIM) family proteins are important effectors of innate immunity against viral infections. Here we identified TRIM35 as a regulator of TRAF3 activation. Deficiency in or inhibition of TRIM35 suppressed the production of type I interferon (IFN) in response to viral infection. Trim35-deficient mice were more susceptible to influenza A virus (IAV) infection than were wild-type mice. TRIM35 promoted the RIG-I-mediated signaling by catalyzing Lys63-linked polyubiquitination of TRAF3 and the subsequent formation of a signaling complex with VISA and TBK1. IAV PB2 polymerase countered the innate antiviral immune response by impeding the Lys63-linked polyubiquitination and activation of TRAF3. TRIM35 mediated Lys48-linked polyubiquitination and proteasomal degradation of IAV PB2, thereby antagonizing its suppression of TRAF3 activation. Our in vitro and in vivo findings thus reveal novel roles of TRIM35, through catalyzing Lys63- or Lys48-linked polyubiquitination, in RIG-I antiviral immunity and mechanism of defense against IAV infection.
A549 Cells
;
Animals
;
Apoptosis Regulatory Proteins/immunology*
;
DEAD Box Protein 58/immunology*
;
Dogs
;
HEK293 Cells
;
Humans
;
Influenza A Virus, H1N1 Subtype/immunology*
;
Madin Darby Canine Kidney Cells
;
Mice
;
Mice, Knockout
;
Orthomyxoviridae Infections/pathology*
;
Proteolysis
;
RAW 264.7 Cells
;
Signal Transduction/immunology*
;
THP-1 Cells
;
TNF Receptor-Associated Factor 3/immunology*
;
Ubiquitination/immunology*
;
Viral Proteins/immunology*

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