1.Optimization of a fluorescent qPCR detection for RNA of SARS-CoV-2.
Xuelong LI ; Junhua LIU ; Qianyang LIU ; Lin YU ; Shanshan WU ; Xiushan YIN
Chinese Journal of Biotechnology 2020;36(4):732-739
We optimized a fluorescent quantitative polymerase chain reaction (qPCR) assay system for rapid and real time detection of SARS-CoV-2 RNA. The results show that the lowest dilution of RNA samples used for the detection of SARS-CoV-2 RNA could reach 1/10 000 (the initial value is set as 10 ng/μL). Moreover, the cycle threshold (Ct) for samples of clinically diagnosed COVID-19 was lower than 35 or 40. The sensitivity of this method was satisfactory. The results were consistent with those of the COVID-19 detection kit on the market under the same conditions, but the number of cycles required was shortened by about 2. Therefore, the optimized assay developed in this study can be used in screening and early clinical diagnosis. Our work provides a tool to facilitate rapid clinical diagnosis of COVID-19.
Betacoronavirus
;
genetics
;
isolation & purification
;
Coronavirus Infections
;
diagnosis
;
virology
;
Early Diagnosis
;
Humans
;
Pandemics
;
Pneumonia, Viral
;
diagnosis
;
virology
;
Polymerase Chain Reaction
;
methods
;
standards
;
RNA, Viral
;
analysis
;
genetics
;
Sensitivity and Specificity
;
Time Factors
2.Diagnosis, treatment, control and prevention of SARS-CoV-2 and coronavirus disease 2019: back to the future.
Chinese Journal of Biotechnology 2020;36(4):571-592
The ongoing outbreak of the coronavirus disease 2019 (COVID-19) as named by the World Health Organization has millions of confirmed cases around the world and has claimed hundreds of thousands of lives. The virus was named SARS-CoV-2 in February by International Committee on Taxonomy of Viruses. COVID-19 presents as fever, dry cough, dyspnea, headache and pneumonia. In a small subset of severe cases, the disease quickly progresses to respiratory failure and even death. Since the 21st century, there have been three major outbreaks caused by human coronaviruses, including the severe acute respiratory syndrome (SARS) that broke out in 2003, the Middle East respiratory syndrome (MERS) in 2012, and the recent pandemic of COVID-19. Since 2003, significant progress has been made in the study of SARS-CoV and MERS-CoV concerning their natural origins, pathogenesis, antiviral development and vaccine design. Since SARS-CoV-2 and SARS-CoV are closely related, previous findings on SARS-CoV are highly relevant to a better understanding as well as diagnosis, treatment, prevention and control of SARS-CoV-2. In this review, we highlight recent progresses in the field; compare the biological characteristics of SARS-CoV and SARS-CoV-2; summarize the urgently-needed diagnostic, treatment, prevention and control options; and provide future perspectives for the outcome of the outbreak and research questions to be answered, including some of the difficulties in vaccine development. Hopefully, our comments and suggestions would prove useful for the control of the SARS-CoV-2 epidemic in China and the world.
Antiviral Agents
;
pharmacology
;
therapeutic use
;
Betacoronavirus
;
drug effects
;
immunology
;
pathogenicity
;
Coronavirus Infections
;
diagnosis
;
prevention & control
;
therapy
;
virology
;
Humans
;
Middle East Respiratory Syndrome Coronavirus
;
drug effects
;
immunology
;
pathogenicity
;
Pandemics
;
prevention & control
;
Pneumonia, Viral
;
diagnosis
;
prevention & control
;
therapy
;
virology
;
SARS Virus
;
drug effects
;
immunology
;
pathogenicity
;
Severe Acute Respiratory Syndrome
;
diagnosis
;
prevention & control
;
therapy
;
virology
;
Viral Vaccines
3.Laparoscopic surgery in a patient with atypical presentation of COVID-19: salient points to reduce the perils of surgery.
Shen Leong OH ; Clement Luck Khng CHIA ; Yanlin Rachel CHEN ; Tiong Thye Jerry GOO ; Anil Dinkar RAO ; Kok Yang TAN ; Marc Weijie ONG
Singapore medical journal 2020;61(8):443-444
Aged
;
Cholecystectomy, Laparoscopic
;
methods
;
Cholelithiasis
;
complications
;
diagnosis
;
surgery
;
Clinical Laboratory Techniques
;
Coronavirus Infections
;
complications
;
diagnosis
;
Elective Surgical Procedures
;
methods
;
Follow-Up Studies
;
Humans
;
Infection Control
;
methods
;
Male
;
Pandemics
;
Patient Safety
;
Pneumonia, Viral
;
complications
;
diagnosis
;
Postoperative Care
;
methods
;
Risk Assessment
;
Singapore
;
Treatment Outcome
4.Educational case series of electrocardiographs during the COVID-19 pandemic and the implications for therapy.
Ching-Hui SIA ; Jinghao Nicholas NGIAM ; Nicholas CHEW ; Darius Lian Lian BEH ; Kian Keong POH
Singapore medical journal 2020;61(8):406-412
Adenosine Monophosphate
;
analogs & derivatives
;
therapeutic use
;
Adult
;
Aged
;
Alanine
;
analogs & derivatives
;
therapeutic use
;
Anti-Arrhythmia Agents
;
therapeutic use
;
Arrhythmias, Cardiac
;
diagnosis
;
epidemiology
;
Coronavirus Infections
;
diagnosis
;
drug therapy
;
epidemiology
;
Echocardiography
;
Electrocardiography
;
methods
;
statistics & numerical data
;
Female
;
Follow-Up Studies
;
Humans
;
Male
;
Pandemics
;
statistics & numerical data
;
Pneumonia, Viral
;
diagnosis
;
drug therapy
;
epidemiology
;
Sampling Studies
;
Severe Acute Respiratory Syndrome
;
diagnosis
;
epidemiology
;
Singapore
;
Treatment Outcome
5.Variable computed tomography appearances of COVID-19.
Zhan Ye LIM ; Hau Wei KHOO ; Terrence Chi Hong HUI ; Shawn Shi Xian KOK ; Kenneth Eng Ling KWAN ; Barnaby Edward YOUNG ; Cher Heng TAN ; Gregory Jon Leng KAW
Singapore medical journal 2020;61(7):387-391
The coronavirus disease 2019 (COVID-19) is typically diagnosed by specific assays that detect viral nucleic acid from the upper respiratory tract; however, this may miss infections involving only the lower airways. Computed tomography (CT) has been described as a diagnostic modality in the COVID-19 diagnosis and treatment plan. We present a case series with virologically confirmed COVID-19 pneumonia. Variable CT features were observed: consolidation with ground-glass opacities, ground-glass opacities with subpleural reticular bands, and an anterior-posterior gradient of lung abnormalities resembling that of acute respiratory distress syndrome. Evolution of CT findings was observed in one patient, where there was interval resolution of bilateral lung consolidation with development of bronchiolectasis and subpleural fibrotic bands. While sensitive for detecting lung parenchymal abnormalities in COVID-19 pneumonia, the use of CT for initial diagnosis is discouraged and should be reserved for specific clinical indications. Interpretation of chest CT findings should be correlated with duration of symptoms to better determine the disease stage and aid in patient management.
Aged
;
Betacoronavirus
;
Coronavirus Infections
;
diagnosis
;
Diagnosis, Differential
;
Female
;
Humans
;
Lung
;
diagnostic imaging
;
Male
;
Middle Aged
;
Pandemics
;
Pneumonia, Viral
;
diagnosis
;
Tomography, X-Ray Computed
;
methods
6.Trauma and orthopaedics in the COVID-19 pandemic: breaking every wave.
Keng Jin Darren TAY ; Yee Han Dave LEE
Singapore medical journal 2020;61(8):396-398
Coronavirus Infections
;
epidemiology
;
prevention & control
;
Elective Surgical Procedures
;
statistics & numerical data
;
Female
;
Humans
;
Infection Control
;
methods
;
Infectious Disease Transmission, Patient-to-Professional
;
prevention & control
;
Male
;
Occupational Health
;
statistics & numerical data
;
Orthopedic Procedures
;
methods
;
statistics & numerical data
;
Outcome Assessment, Health Care
;
Pandemics
;
prevention & control
;
statistics & numerical data
;
Patient Safety
;
statistics & numerical data
;
Pneumonia, Viral
;
epidemiology
;
prevention & control
;
Risk Assessment
;
Safety Management
;
Singapore
;
Wounds and Injuries
;
diagnosis
;
epidemiology
;
surgery
9.Cross-reaction of Sera from COVID-19 Patients with SARS-CoV Assays.
Wei Yee WAN ; Siew Hoon LIM ; Eng Hong SENG
Annals of the Academy of Medicine, Singapore 2020;49(7):523-526
Antibodies, Viral
;
physiology
;
Betacoronavirus
;
physiology
;
Clinical Laboratory Techniques
;
Coronavirus Infections
;
diagnosis
;
Cross Reactions
;
physiology
;
Enzyme-Linked Immunosorbent Assay
;
Fluorescent Antibody Technique, Indirect
;
Humans
;
Pandemics
;
Pneumonia, Viral
;
diagnosis
;
SARS Virus
;
physiology
10.Palliative Care in a COVID-19 Intensive Care Unit (ICU): Challenges and Recommendations for Palliative Care Teams in a Pandemic ICU.
Choo Hwee POI ; Mervyn Yh KOH ; Han Yee NEO ; Allyn Ym HUM
Annals of the Academy of Medicine, Singapore 2020;49(7):517-522
Aged, 80 and over
;
Betacoronavirus
;
Coronavirus Infections
;
diagnosis
;
therapy
;
transmission
;
Critical Care
;
organization & administration
;
Humans
;
Male
;
Palliative Care
;
organization & administration
;
Pandemics
;
Pneumonia, Viral
;
diagnosis
;
therapy
;
transmission
;
Terminal Care
;
organization & administration

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