1.In Silico profiling of the Angiotensin converting enzyme binding affinities, toxicity and Pharmacokinetics of compounds from the nuts of Areca Catechu, Linn. and its bioisosteres
Kenneth C. Ezeuba ; Joanna V. Toralba ; Junie B. Billones
Philippine Journal of Health Research and Development 2023;27(4):78-93
Background:
Hypertension is a worldwide epidemic that has been recognized as the most leading global risk for mortality, with its prevalence associated with increased blood pressure, concomitant risks of cardiovascular and kidney diseases, and major commonality in individuals advanced in age. With the current treatment options for hypertension management, there is still a need to develop therapies that directly target receptors that aid in hypertension treatment.
Methodology:
The study focused on the in-silico profiling of the reported compounds from Areca catechu L. (fam. Arecaceae) towards the n-domain and c-domain angiotensin converting enzyme (ACE) receptor models. Bioisosteric replacement was used to create bioisosteres investigated for similar binding affinity.
Results:
Some A. catechu compounds exhibited favorable binding energies towards the n- and c-domain receptor models of ACE, binding in the same ACE ligand binding site as lisinopril, benazepril, and sampatrilat via similar interactions and amino acid residues. The majority of A. catechu compounds with favorable ACE binding energies belong to the phytochemical classes of flavonoids, polyphenols and phenolics, glycosides, and steroids. After in silico toxicity and pharmacokinetic profiling, the bioisosteres Leuco-DM02-39, Leuco-DM02-66, Leuco-DM05-60, Querc-DM09-63, and Querc-DM14-31 with binding energies higher than their parent compounds and comparable to lisinopril, benazepril, and sampatrilat were deemed the best.
Conclusion
A. catechu compounds have the potential to target ACE n-domain and c-domain receptor models. Three leucocyanidin and two quercetin bioisosteres exhibited favorable binding to the n-domain and c-domain ACE receptor models and could be further optimized to derive a promising antihypertensive agent through ACE inhibition.
Peptidyl-Dipeptidase A
;
Areca
;
Hypertension
2.Myocardial injury caused by infection of coronavirus.
Yanxia HUANG ; Mei MENG ; Dechang CHEN
Chinese Critical Care Medicine 2023;35(6):665-668
Coronaviruses are single-stranded RNA viruses that are common in animals. In the past 20 years, there have been three large-scale epidemics of coronaviruses, including severe acute respiratory syndrome (SARS), Middle East respiratory syndrome (MERS), and coronavirus disease (COVID). Heart disease is an independent risk factor for severe COVID. At the same time, SARS-CoV-2 infection is often complicated with myocardial injury, which is closely related to poor prognosis. The receptors of SARS coronavirus are angiotensin-converting enzyme 2 (ACE2) and CD209L, among which ACE2 is the main receptor, and ACE2 is abundant in the heart. The receptor of MERS-coronavirus is dipeptide peptidase 4 (DPP4), which is not expressed in myocardial cells, but existed in vascular endothelial cells and blood. These receptors are important factors for the myocardial injury caused by coronavirus infection.
Animals
;
COVID-19
;
Angiotensin-Converting Enzyme 2
;
SARS-CoV-2
;
Endothelial Cells
;
Peptidyl-Dipeptidase A/genetics*
3.Influence of the severity and treatment of allergic rhinitis and asthma on SARS-CoV-2 infection.
Chinese Journal of Preventive Medicine 2023;57(8):1171-1175
Coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has affected 660 million people and resulted in 6.7 million deaths. At present, a variety of risk factors related to the severity of COVID-19 have been identified, but whether allergic rhinitis and asthma will affect SARS-CoV-2 infection remains controversial. In general, there is no sufficient evidence to support that allergic rhinitis or asthma is a risk factor for increasing the rate of SARS-CoV-2 infection or aggravating the disease. Some studies even show that atopy may be a protective factor to alleviate SARS-CoV-2 infection, which is related to the decreased expression of angiotensin-converting enzyme 2, the receptor required for SARS-CoV-2 to enter cells, in atopic individuals. This paper reviews the influence of the severity and treatment of allergic rhinitis and asthma on SARS-CoV-2 infection, in order to provide some references for establishing strategies for prevention, risk stratification and treatment of COVID-19.
Humans
;
COVID-19
;
SARS-CoV-2/metabolism*
;
Peptidyl-Dipeptidase A/metabolism*
;
Asthma/therapy*
;
Rhinitis, Allergic
4.Influence of the severity and treatment of allergic rhinitis and asthma on SARS-CoV-2 infection.
Chinese Journal of Preventive Medicine 2023;57(8):1171-1175
Coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has affected 660 million people and resulted in 6.7 million deaths. At present, a variety of risk factors related to the severity of COVID-19 have been identified, but whether allergic rhinitis and asthma will affect SARS-CoV-2 infection remains controversial. In general, there is no sufficient evidence to support that allergic rhinitis or asthma is a risk factor for increasing the rate of SARS-CoV-2 infection or aggravating the disease. Some studies even show that atopy may be a protective factor to alleviate SARS-CoV-2 infection, which is related to the decreased expression of angiotensin-converting enzyme 2, the receptor required for SARS-CoV-2 to enter cells, in atopic individuals. This paper reviews the influence of the severity and treatment of allergic rhinitis and asthma on SARS-CoV-2 infection, in order to provide some references for establishing strategies for prevention, risk stratification and treatment of COVID-19.
Humans
;
COVID-19
;
SARS-CoV-2/metabolism*
;
Peptidyl-Dipeptidase A/metabolism*
;
Asthma/therapy*
;
Rhinitis, Allergic
5.SARS-CoV-2 neutralizing monoclonal antibodies and nanobodies: a review.
Yulei CHEN ; Jinjin LIN ; Peiyi ZHENG ; Minjie CAO ; Tengchuan JIN
Chinese Journal of Biotechnology 2022;38(9):3173-3193
Coronavirus disease (COVID-19) is an infectious disease caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), with strong contagiousness, high susceptibility and long incubation period. cell entry by SARS-CoV-2 requires the binding between the receptor-binding domain of the viral spike protein and the cellular angiotensin-converting enzyme 2 (ACE2). Here, we briefly reviewed the mechanisms underlying the interaction between SARS-CoV-2 and ACE2, and summarized the latest research progress on SARS-CoV-2 neutralizing monoclonal antibodies and nanobodies, so as to better understand the development process and drug research direction of COVID-19. This review may facilitate understanding the development of neutralizing antibody drugs for emerging infectious diseases, especially for COVID-19.
Angiotensin-Converting Enzyme 2
;
Antibodies, Monoclonal
;
Antibodies, Neutralizing
;
Antibodies, Viral
;
COVID-19
;
Humans
;
Peptidyl-Dipeptidase A/metabolism*
;
Protein Binding
;
SARS-CoV-2
;
Single-Domain Antibodies
;
Spike Glycoprotein, Coronavirus/metabolism*
6.Degradation of SARS-CoV-2 receptor ACE2 by the E3 ubiquitin ligase Skp2 in lung epithelial cells.
Guizhen WANG ; Qun ZHAO ; Hui ZHANG ; Fan LIANG ; Chen ZHANG ; Jun WANG ; Zhenyin CHEN ; Ran WU ; Hong YU ; Beibei SUN ; Hua GUO ; Ruie FENG ; Kaifeng XU ; Guangbiao ZHOU
Frontiers of Medicine 2021;15(2):252-263
An unexpected observation among the COVID-19 pandemic is that smokers constituted only 1.4%-18.5% of hospitalized adults, calling for an urgent investigation to determine the role of smoking in SARS-CoV-2 infection. Here, we show that cigarette smoke extract (CSE) and carcinogen benzo(a)pyrene (BaP) increase ACE2 mRNA but trigger ACE2 protein catabolism. BaP induces an aryl hydrocarbon receptor (AhR)-dependent upregulation of the ubiquitin E3 ligase Skp2 for ACE2 ubiquitination. ACE2 in lung tissues of non-smokers is higher than in smokers, consistent with the findings that tobacco carcinogens downregulate ACE2 in mice. Tobacco carcinogens inhibit SARS-CoV-2 spike protein pseudovirions infection of the cells. Given that tobacco smoke accounts for 8 million deaths including 2.1 million cancer deaths annually and Skp2 is an oncoprotein, tobacco use should not be recommended and cessation plan should be prepared for smokers in COVID-19 pandemic.
Adult
;
Animals
;
COVID-19
;
Epithelial Cells
;
Humans
;
Lung
;
Mice
;
Pandemics
;
Peptidyl-Dipeptidase A
;
SARS-CoV-2
;
Spike Glycoprotein, Coronavirus
;
Ubiquitin-Protein Ligases/genetics*
7.Patients taking angiotensin-converting enzyme inhibitors/angiotensin II type I receptor blockers: higher risks of severe acute respiratory syndrome coronavirus 2 infection but milder clinical manifestations?
Jie-Lin DENG ; Yun-Qiu JIANG ; Yan-Kai GUO ; Hong-Liang LI
Chinese Medical Journal 2020;133(22):2650-2652
Angiotensin II Type 1 Receptor Blockers/adverse effects*
;
Angiotensin-Converting Enzyme 2
;
Angiotensin-Converting Enzyme Inhibitors/adverse effects*
;
Betacoronavirus
;
COVID-19
;
Coronavirus Infections/etiology*
;
Humans
;
Pandemics
;
Peptidyl-Dipeptidase A/physiology*
;
Pneumonia, Viral/etiology*
;
SARS-CoV-2
8.Recapitulation of SARS-CoV-2 infection and cholangiocyte damage with human liver ductal organoids.
Bing ZHAO ; Chao NI ; Ran GAO ; Yuyan WANG ; Li YANG ; Jinsong WEI ; Ting LV ; Jianqing LIANG ; Qisheng ZHANG ; Wei XU ; Youhua XIE ; Xiaoyue WANG ; Zhenghong YUAN ; Junbo LIANG ; Rong ZHANG ; Xinhua LIN
Protein & Cell 2020;11(10):771-775
Betacoronavirus
;
isolation & purification
;
pathogenicity
;
Bile Acids and Salts
;
metabolism
;
Bile Ducts, Intrahepatic
;
pathology
;
virology
;
Cell Culture Techniques
;
Coronavirus Infections
;
complications
;
pathology
;
Cytokine Release Syndrome
;
etiology
;
physiopathology
;
Cytopathogenic Effect, Viral
;
Epithelial Cells
;
enzymology
;
pathology
;
virology
;
Humans
;
Hyperbilirubinemia
;
etiology
;
Liver
;
pathology
;
Organoids
;
pathology
;
virology
;
Pandemics
;
Peptidyl-Dipeptidase A
;
analysis
;
Pneumonia, Viral
;
complications
;
pathology
;
Receptors, Virus
;
analysis
;
Serine Endopeptidases
;
analysis
;
Viral Load
10.In Silico Screening of Potential Spike Glycoprotein Inhibitors of SARS-CoV-2 with Drug Repurposing Strategy.
Tian-Zi WEI ; Hao WANG ; Xue-Qing WU ; Yi LU ; Sheng-Hui GUAN ; Feng-Quan DONG ; Chen-le DONG ; Gu-Li ZHU ; Yu-Zhou BAO ; Jian ZHANG ; Guan-Yu WANG ; Hai-Ying LI
Chinese journal of integrative medicine 2020;26(9):663-669
OBJECTIVE:
To select potential molecules that can target viral spike proteins, which may potentially interrupt the interaction between the human angiotension-converting enzyme 2 (ACE2) receptor and viral spike protein by virtual screening.
METHODS:
The three-dimensional (3D)-coordinate file of the receptor-binding domain (RBD)-ACE2 complex for searching a suitable docking pocket was firstly downloaded and prepared. Secondly, approximately 15,000 molecular candidates were prepared, including US Food and Drug Administration (FDA)-approved drugs from DrugBank and natural compounds from Traditional Chinese Medicine Systems Pharmacology (TCMSP), for the docking process. Then, virtual screening was performed and the binding energy in Autodock Vina was calculated. Finally, the top 20 molecules with high binding energy and their Chinese medicine (CM) herb sources were listed in this paper.
RESULTS:
It was found that digitoxin, a cardiac glycoside in DrugBank and bisindigotin in TCMSP had the highest docking scores. Interestingly, two of the CM herbs containing the natural compounds that had relatively high binding scores, Forsythiae fructus and Isatidis radix, are components of Lianhua Qingwen (), a CM formula reportedly exerting activity against severe acute respiratory syndrome (SARS)-Cov-2. Moreover, raltegravir, an HIV integrase inhibitor, was found to have a relatively high binding score.
CONCLUSIONS
A class of compounds, which are from FDA-approved drugs and CM natural compounds, that had high binding energy with RBD of the viral spike protein. Our work provides potential candidates for other researchers to identify inhibitors to prevent SARS-CoV-2 infection, and highlights the importance of CM and integrative application of CM and Western medicine on treating COVID-19.
China
;
Computer Simulation
;
Coronavirus Infections
;
diagnosis
;
drug therapy
;
Drug Repositioning
;
methods
;
Drugs, Chinese Herbal
;
pharmacology
;
Glycoproteins
;
drug effects
;
metabolism
;
Humans
;
Imaging, Three-Dimensional
;
Mass Screening
;
methods
;
Molecular Docking Simulation
;
methods
;
Pandemics
;
Peptidyl-Dipeptidase A
;
drug effects
;
Pneumonia, Viral
;
diagnosis
;
drug therapy
;
Protein Binding
;
United States
;
United States Food and Drug Administration


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