1.Adeno-Associated Virus 2-Mediated Hepatocellular Carcinoma is Very Rare in Korean Patients.
Kyoung Jin PARK ; Jongan LEE ; June Hee PARK ; Jae Won JOH ; Choon Hyuck David KWON ; Jong Won KIM
Annals of Laboratory Medicine 2016;36(5):469-474
BACKGROUND: The incidence and etiology of hepatocellular carcinoma (HCC) vary widely according to race and geographic regions. The insertional mutagenesis of adeno-associated virus 2 (AAV2) has recently been considered a new viral etiology of HCC. The aim of this study was to investigate the frequency and clinical characteristics of AAV2 in Korean patients with HCC. METHODS: A total of 289 unrelated Korean patients with HCC, including 159 Hepatitis-B-related cases, 16 Hepatitis-C-related cases, and 114 viral serology-negative cases, who underwent surgery at the Samsung Medical Center in Korea from 2009 to 2014 were enrolled in this study. The presence of AAV2 in fresh-frozen tumor tissues was investigated by DNA PCR and Sanger sequencing. The clinical and pathological characteristics of AAV2-associated HCC in these patients were compared with previous findings in French patients. RESULTS: The AAV2 detection rate in Korean patients (2/289) was very low compared with that in French patients (11/193). Similar to the French patients, the Korean patients with AAV2-related HCC showed no signs of liver cirrhosis. The Korean patients were younger than the French patients with the same AAV2-associated HCC; the ages at diagnosis of the two Korean patients were 47 and 39 yr, while the median age of the 11 French patients was 55 yr (range 43-90 yr). CONCLUSIONS: AAV2-associated HCC was very rare in Korean patients with HCC. Despite a limited number of cases, this study is the first to report the clinical characteristics of Korean patients with AAV2-associated HCC. These findings suggest epidemiologic differences in viral hepatocarcinogenesis between Korean and European patients.
Adult
;
Asian Continental Ancestry Group
;
Capsid Proteins/genetics
;
Carcinoma, Hepatocellular/etiology/*pathology/virology
;
DNA, Viral/chemistry/genetics/metabolism
;
DNA-Binding Proteins/genetics
;
Dependovirus/*genetics/isolation & purification/pathogenicity
;
Female
;
Humans
;
Incidence
;
Inverted Repeat Sequences/genetics
;
Liver Neoplasms/etiology/*pathology/virology
;
Male
;
Middle Aged
;
Parvoviridae Infections/complications/epidemiology
;
Polymerase Chain Reaction
;
Republic of Korea
;
Sequence Analysis, DNA
;
Viral Proteins/genetics
2.Etiological study of human bocavirus 1-4 in children with acute diarrhea in Lanzhou, China.
Jing-Yao XIANG ; Dan-Di LI ; Xin MA ; Yan-Qing GUO ; Zhao-Jun DUAN ; Yu-Ning LI
Chinese Journal of Virology 2014;30(4):402-407
This study aimed to study the epidemiological and clinical characteristics of human bocavirus 1-4 (HBoV1-4) in children with acute diarrhea in Lanzhou and to investigate the association between HBoV and acute gastroenteritis. A total of 331 stool samples were collected from children aged under 5 years with acute diarrhea at the Department of Pediatrics, the First Hospital, Lanzhou University, between July 2012 and June 2013. Nested PCR was used to screen for HBoV and a general PCR was employed to screen other common diarrhea viruses. We found human bocavirus 1, 2, 3 and 4 in 26, 15, 7 and 1 cases, respectively. There was no specific seasonal distribution of HBoV, with infections occurring throughout the year. HBoV was mostly found in children aged between 7 and 12 months, with a mean age of 11.04 months (+/- 6.92 months), and 93.88% of affected children were aged under 2 years. Overall, 71.3% of mixed infections were mixed and the majority of other infections were caused by rotavirus. There was no statistical difference in the incidence of fever and vomiting associated with HBoV infection. A rare virus strain, HBoV4 (LZFB086), was identified, which showed highest levels of nucleotide sequence identity (99.0%) with a single Thai HBoV strain (JQ267789). No case of HBoV2B was found. In conclusion, HBoV1 was a major etiological pathogen of HBoV in pediatric cases in Lanzhou. HBoV4 was detected in feces for the first time in China. The rate of mixed infections was high and rotavirus was dominant. The data presented suggests that HBoV is not a major causative agent of gastroenteritis.
China
;
epidemiology
;
Diarrhea
;
epidemiology
;
virology
;
Feces
;
virology
;
Human bocavirus
;
classification
;
genetics
;
isolation & purification
;
Humans
;
Infant
;
Molecular Sequence Data
;
Parvoviridae Infections
;
epidemiology
;
virology
;
Phylogeny
;
Seasons
3.Detection of human bocavirus in children with acute respiratory tract infections in Lanzhou and Nanjing, China.
Jian Jun WU ; Yu JIN ; Na LIN ; Zhi Ping XIE ; Jie Mei YU ; Jin Song LI ; Chang Qing CAO ; Xin Hui YUAN ; Jin Rong SONG ; Jing ZHANG ; Yang ZHAO ; Xiao Qian GAO ; Zhao Jun DUAN
Biomedical and Environmental Sciences 2014;27(11):841-848
OBJECTIVEThe aim of this study was to explore the prevalent characteristics of HBoV1 and its co-infection.
METHODSPCR was used to detect HBoV1-DNA (HBoV1) and other viruses. A multivariate logistic regression model was used to explore possibility of co-detected for related viruses.
RESULTSThe positivity rates in Nanjing and Lanzhou were 9.38% (74/789) and 11.62% (161/1386), respectively (P>0.05). The HBoV1 positive group was younger than negative group (P<0.05). Seasonal differences were noted, with a higher frequency of infection in December and July. HBoV1-positive children [72.34% (169/235)] were co-infected with other respiratory viruses. Multifactorial analysis showed no correlations between HBoV1 and the clinical classification, region, gender, age, or treatment as an outpatient or in a hospital. Correlations were identified between HBoV1 infections with ADV (OR=1.53, 95% CI 1.03-2.28), RSV (OR=0.71, 95% CI 0.52-0.98), and IFVA (OR=1.77, 95% CI 1.00-3.13).
CONCLUSIONPresence of HBoV1 in nasopharyngeal aspirates did not correlate with region or gender, although the prevalence of HBoV1 was higher in younger children. There were no correlations between HBoV1 and other variables, except for the season and ADV, RSV, or IFVA infections.
Acute Disease ; Child, Preschool ; China ; epidemiology ; Comorbidity ; DNA, Viral ; genetics ; Female ; Human bocavirus ; genetics ; isolation & purification ; Humans ; Logistic Models ; Male ; Multivariate Analysis ; Parvoviridae Infections ; epidemiology ; virology ; Prevalence ; Respiratory Tract Infections ; epidemiology ; virology
4.Viral etiology of acute respiratory tract infection among pediatric inpatients and outpatients from 2010 to 2012 in Beijing, China.
Chun-Yan LIU ; Yan XIAO ; Zheng-de XIE ; Li-Li REN ; Ying-Hui HU ; Yuan YAO ; Yan YANG ; Su-Yun QIAN ; Cheng-Song ZHAO ; Kun-Ling SHEN
Chinese Journal of Pediatrics 2013;51(4):255-259
OBJECTIVEAcute respiratory tract infections (ARI) are the leading cause of pediatric morbidity and mortality worldwide, particularly in developing countries. Viruses are the main pathogens of ARI in children. The purpose of the present study was to determine the epidemiologic features of respiratory viruses, including novel viruses, in outpatient and hospitalized children with ARI.
METHODFrom March 2010 to February 2012, 2066 children with ARI, including 1050 outpatients and 1016 inpatients, were involved in this study. One nasopharyngeal aspirate or throat swab specimen was collected from each patient. Reverse transcription (RT) PCRs were performed to detect common respiratory tract viruses including respiratory syncytial virus (RSV), human rhinovirus (HRV), influenza virus (IFV), parainfluenza virus (PIV) type 1-4, adenovirus (ADV), enterovirus (EV), human coronavirus (HCOV), human metapneumonia virus (HMPV) and human bocavirus (HBOV).
RESULTAt least one viral pathogen was identified in each of 1274 out of 2066 patients and the overall positive rate was 61.7%. The positive rate in inpatient (69.7%) was higher than that in outpatient (53.9%). The frequencies of detection of various viruses among in- and outpatients were different. RSV was the most prevalent virus detected among hospitalized children, followed by HRV and PIV, whereas IFV was the most frequently identified virus in the outpatient group, followed by ADV and PIV. Simultaneous detection of two or more viruses was found in 377 cases. Coinfection was more frequent in inpatients than in outpatients (30.1% vs. 6.8%, P < 0.001).
CONCLUSIONRespiratory viruses play an important role in children with ARI, especially in young children. RSV was the most prevalent virus detected among hospitalized children, whereas IFV was the most frequently identified virus in the outpatient group. Viral coinfections are frequently identified, particularly in hospitalized patients. Further studies are required to better understand the impact of coinfections in children with ARI.
Acute Disease ; Age Distribution ; Child ; Child, Hospitalized ; Child, Preschool ; China ; epidemiology ; Coinfection ; epidemiology ; virology ; DNA Viruses ; isolation & purification ; Female ; Humans ; Infant ; Male ; Nasopharynx ; virology ; Outpatients ; Parainfluenza Virus 1, Human ; isolation & purification ; Parvoviridae Infections ; epidemiology ; Respiratory Syncytial Virus Infections ; epidemiology ; Respiratory Syncytial Virus, Human ; isolation & purification ; Respiratory Tract Infections ; epidemiology ; virology ; Reverse Transcriptase Polymerase Chain Reaction ; Rhinovirus ; isolation & purification ; Seasons
5.Human bocavirus and its current epidemic status in China.
Chinese Journal of Virology 2013;29(1):56-64
Human bocavirus (HBoV) is classified in the family of parvovirdae, genus bocavirus. Besides parvovirus B19 and human parvovirus 4 (PARV4), HBoV isone of the parvoviruses currently known to infect and cause illness in human. So far, four different HBoVs (HBoV1-4) have been successively reported. The incidence of HBoVs infection varies widely, the clinical presentations of patients are different, and HBoVs are often co-detected with other pathogens. There are already quite a few report of HBoVs infection, and this article reviews and discusses the biological characters, epidemic characters, pathogenic mechanism, phylogenetic analyses of HBoVs and the epidemiological situation in China.
China
;
epidemiology
;
Gastrointestinal Diseases
;
etiology
;
Human bocavirus
;
classification
;
genetics
;
immunology
;
isolation & purification
;
Humans
;
Parvoviridae Infections
;
epidemiology
;
Phylogeny
6.The effects of co-infection with human parvovirus B19 and Plasmodium falciparum on type and degree of anaemia in Ghanaian children.
Kwabena Obeng DUEDU ; Kwamena William Coleman SAGOE ; Patrick Ferdinand AYEH-KUMI ; Raymond Bedu AFFRIM ; Theophilus ADIKU
Asian Pacific Journal of Tropical Biomedicine 2013;3(2):129-139
OBJECTIVETo determin the extent to which parvovirus B19 (B19V) and co-infection of B19V and malaria contribute to risk of anaemia in children.
METHODSB19V DNA and malaria parasites were screened for 234 children at the PML Children's Hospital in Accra. The role of B19V and co-infection with B19V and malaria in anaemia was evaluated by analysing full blood cell counts, malaria and B19V DNA results from these children.
RESULTSThe prevalence of B19V, malaria and co-infection with B19V and malaria was 4.7%, 41.9% and 2.6%, respectively. Malaria posed a greater risk in the development of mild anaemia compared to severe anaemia (OR=5.28 vrs 3.15) whereas B19V posed a higher risk in the development of severe anaemia compared to mild anaemia (OR=4.07 vrs 1.00) from a non-anaemic child. Persons with co-infection with B19V and malaria had 2.23 times the risk (95% CI=0.40-12.54) of developing severe anaemia should they already have a mild anaemia. The degree of anaemia was about three times affected by co-infection (Pillai's trace=0.551, P=0.001) as was affected by malaria alone (Pillai's trace=0.185, P=0.001). B19V alone did not significantly affect the development of anaemia in a non-anaemic child. Microcytic anaemia was associated with B19V and co-infection with B19V and malaria more than normocytic normochromic anaemia.
CONCLUSIONSB19V was associated with malaria in cases of severe anaemia. The association posed a significant risk for exacerbation of anaemia in mild anaemic children. B19V and co-infection with B19V and malaria may be associated with microcytic anaemia rather than normocytic normochromic anaemia as seen in cases of B19V infection among persons with red cell abnormalities.
Adolescent ; Anemia ; epidemiology ; etiology ; parasitology ; virology ; Child ; Child, Preschool ; Coinfection ; complications ; epidemiology ; parasitology ; physiopathology ; virology ; Female ; Ghana ; epidemiology ; Humans ; Infant ; Malaria, Falciparum ; complications ; epidemiology ; physiopathology ; Male ; Parvoviridae Infections ; complications ; epidemiology ; physiopathology ; Parvovirus B19, Human ; isolation & purification ; physiology ; Plasmodium falciparum ; isolation & purification ; physiology ; Polymerase Chain Reaction ; Prevalence ; Risk Factors
8.Three years surveillance of viral etiology of acute lower respiratory tract infection in children from 2007 to 2010.
Zheng-de XIE ; Yan XIAO ; Chun-yan LIU ; Ying-hui HU ; Yuan YAO ; Yan YANG ; Su-yun QIAN ; Rong GENG ; Jian-wei WANG ; Kun-ling SHEN
Chinese Journal of Pediatrics 2011;49(10):745-749
OBJECTIVEViruses are common pathogens of acute lower respiratory tract infection (ALRTI) in children. There are few studies on consecutive monitoring of viral pathogens of ALRTI in a larger cohort during the past several years. The aim of this study was to investigate the viral pathogens of ALRTI in children of different age groups and to outline the epidemic feature of different viruses.
METHOD(1) Totally 1914 (1281 male and 709 female) children with clinical diagnosis of ALRTI during the period of March 2007 to March 2010 were recruited into this study. These patients were hospitalized patients in department of internal medicine or outpatients in emergency department in Beijing Children's Hospital. The patients were divided into four groups, including 1072 patients < 1 year old, 326 patients 1- < 3 years old, 158 patients 3- < 6 years old, 358 patients ≥ 6 years old. One nasopharyngeal aspirate specimen was collected from each patient. Reverse transcription (RT) PCR methods were applied to detect common respiratory viruses including respiratory syncytial virus (RSV), human rhinovirus (HRV), influenza virus type A, B and C (IFA, IFB, IFC), parainfluenza virus (PIV) type 1-4, adenovirus (ADV), enterovirus (EV), human coronavirus (HCOV), human metapneumovirus (HMPV) and human bocavirus (HBOV).
RESULT(1) The total positive rate of viruses was 70.3%. The positive rate was 83.0% (890/1072) in the group of < 1 year old, and 80.1% (261/326) in group of 1- < 3 years old, 60.8% (96/158) in group of 3- < 6 years old and 27.7% (99/358) in group of ≥ 6 years old, respectively. There was a significant difference in the positive rate among different age groups (χ² = 2213.5, P = 0.000). The top three viruses were RSV, HRV and PIV; and the positive rates were 50.9%, 36.2% and 12.0% respectively in group of < 1 year old. (2) The epidemic seasons of RSV and HRV were winter and spring, and PIV infection was epidemic in spring and summer. (3) The detection rates of 2 or more viruses were 38.2%, 36.4%, 30.2% and 15.2% in groups of < 1 year old, 1- < 3 years old, 3- < 6 years old and ≥ 6 years old, respectively. There was a significant difference in the mixed infection rate among different age groups (χ² = 1346.00, P = 0.000).
CONCLUSIONRSV, HRV and PIV were the most predominant pathogens in younger children with ALRTI. Different viral infections had different seasonal features. Mixed infections with two or more viruses were detected in substantial proportion of patients with ALRTI, but further studies are needed to explore the clinical significance of mixed infection with viruses in patients with ALRTI.
Acute Disease ; Adolescent ; Child ; Child, Preschool ; China ; epidemiology ; Female ; Human bocavirus ; isolation & purification ; Humans ; Infant ; Male ; Parainfluenza Virus 1, Human ; isolation & purification ; Parvoviridae Infections ; epidemiology ; virology ; Respiratory Syncytial Virus Infections ; epidemiology ; virology ; Respiratory Syncytial Virus, Human ; isolation & purification ; Respiratory Tract Diseases ; epidemiology ; virology ; Respirovirus Infections ; epidemiology ; virology
9.Human Bocavirus in Patients with Respiratory Tract Infection.
Jang Su KIM ; Chae Seung LIM ; Young Kee KIM ; Kap No LEE ; Chang Kyu LEE
The Korean Journal of Laboratory Medicine 2011;31(3):179-184
BACKGROUND: Human bocavirus (HBoV) is a newly identified viral pathogen, and its clinical epidemiology and significance in respiratory infections have not yet been completely elucidated. We investigated the prevalence of HBoV infection and the association between viral (HBoV) load and clinical features of the infection in patients of all age-groups. METHODS: Nasopharyngeal aspirates from patients with symptoms of respiratory infection were tested for presence of HBoV by using real-time polymerase chain reaction. HBoV-positive patients were categorized into low- and high-viral-load groups using 1.0x10(6) copies/mL as the threshold value of viral load. RESULTS: Detection rate of HBoV was 4.8% (N=93) in a total of 1,926 samples with peak incidence of infection being observed in patients aged 6-12 months. HBoV infection was more frequently observed in young children, especially, in children aged less than 5 yr, and the HBoV load decreased with increase in age. HBoV was codetected with other respiratory viruses in 17 (18.3%) of the 93 HBoV-positive patients and 15 patients (88.2%) belonged to the low-viral-load group. Patients infected with HBoV alone showed a higher viral load than those patients in whom HBoV was codetected with other respiratory viruses (median load, 3.78x10(5) copies/mL vs. 1.94x10(4) copies/mL, P=0.014). Higher pulse rate (P=0.007) and respiratory rate (P=0.021) were observed in patients with a high-viral-load. CONCLUSIONS: Our results suggest that HBoV may be the causative agent of respiratory infection in the high-viral-load group.
Adolescent
;
Adult
;
Aged
;
Child
;
Child, Preschool
;
DNA, Viral/analysis
;
Female
;
Human bocavirus/*isolation & purification
;
Humans
;
Infant
;
Male
;
Middle Aged
;
Nasopharynx/virology
;
Parvoviridae Infections/diagnosis/*epidemiology/virology
;
Polymerase Chain Reaction
;
Prevalence
;
Respiratory Tract Infections/diagnosis/*epidemiology/virology
;
Viral Load
10.Human Bocavirus in Patients with Respiratory Tract Infection.
Jang Su KIM ; Chae Seung LIM ; Young Kee KIM ; Kap No LEE ; Chang Kyu LEE
The Korean Journal of Laboratory Medicine 2011;31(3):179-184
BACKGROUND: Human bocavirus (HBoV) is a newly identified viral pathogen, and its clinical epidemiology and significance in respiratory infections have not yet been completely elucidated. We investigated the prevalence of HBoV infection and the association between viral (HBoV) load and clinical features of the infection in patients of all age-groups. METHODS: Nasopharyngeal aspirates from patients with symptoms of respiratory infection were tested for presence of HBoV by using real-time polymerase chain reaction. HBoV-positive patients were categorized into low- and high-viral-load groups using 1.0x10(6) copies/mL as the threshold value of viral load. RESULTS: Detection rate of HBoV was 4.8% (N=93) in a total of 1,926 samples with peak incidence of infection being observed in patients aged 6-12 months. HBoV infection was more frequently observed in young children, especially, in children aged less than 5 yr, and the HBoV load decreased with increase in age. HBoV was codetected with other respiratory viruses in 17 (18.3%) of the 93 HBoV-positive patients and 15 patients (88.2%) belonged to the low-viral-load group. Patients infected with HBoV alone showed a higher viral load than those patients in whom HBoV was codetected with other respiratory viruses (median load, 3.78x10(5) copies/mL vs. 1.94x10(4) copies/mL, P=0.014). Higher pulse rate (P=0.007) and respiratory rate (P=0.021) were observed in patients with a high-viral-load. CONCLUSIONS: Our results suggest that HBoV may be the causative agent of respiratory infection in the high-viral-load group.
Adolescent
;
Adult
;
Aged
;
Child
;
Child, Preschool
;
DNA, Viral/analysis
;
Female
;
Human bocavirus/*isolation & purification
;
Humans
;
Infant
;
Male
;
Middle Aged
;
Nasopharynx/virology
;
Parvoviridae Infections/diagnosis/*epidemiology/virology
;
Polymerase Chain Reaction
;
Prevalence
;
Respiratory Tract Infections/diagnosis/*epidemiology/virology
;
Viral Load

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