2.Analysis of SLC25A13 gene variants in 16 infants with intrahepatic cholestasis caused by citrin protein deficiency.
Wenwen LIU ; Xin MA ; Meijuan WANG ; Huijuan NING ; Xuemei ZHONG
Chinese Journal of Medical Genetics 2022;39(2):139-142
OBJECTIVE:
To explore the characteristics of SLC25A13 gene variants in 16 infants with neonatal intrahepatic cholestasis caused by citrin deficiency (NICCD).
METHODS:
The infants were subjected to high-throughput DNA sequencing for coding exons and flanking regions of the target genes. Suspected variants were verified by Sanger sequencing and bioinformatic analysis.
RESULTS:
Among the 16 NICCD cases, 15 were found to harbor pathogenic variants. Among these, IVS14-9A>G, c.1640G>A, c.762T>A, c.736delG, c.1098Tdel and c.851G>A were previously unreported.
CONCLUSION
Six novel SLC25A13 variants were found by high-throughput sequencing, which has enriched the spectrum of SLC25A13 gene variants and provided a basis for genetic counseling and prenatal diagnosis.
Calcium-Binding Proteins/genetics*
;
Cholestasis, Intrahepatic/genetics*
;
Citrullinemia/genetics*
;
Humans
;
Infant
;
Infant, Newborn
;
Mitochondrial Membrane Transport Proteins/genetics*
;
Mutation
;
Organic Anion Transporters/genetics*
;
Protein Deficiency
3.Clinical and genetic analysis of a pediatric patient with sodium taurocholate cotransporting polypeptide deficiency.
Hua LI ; Jian-Wu QIU ; Gui-Zhi LIN ; Mei DENG ; Wei-Xia LIN ; Ying CHENG ; Yuan-Zong SONG
Chinese Journal of Contemporary Pediatrics 2018;20(4):279-284
Sodium taurocholate cotransporting polypeptide (NTCP) deficiency is an inborn error of bile acid metabolism caused by mutations of SLC10A1 gene. This paper reports the clinical and genetic features of a patient with this disease. A 3.3-month-old male infant was referred to the hospital with the complaint of jaundiced skin and sclera over 3 months. Physical examination revealed moderate jaundice of the skin and sclera. The liver was palpable 3.5 cm below the right subcostal margin with a medium texture. Serum biochemistry analysis revealed markedly elevated bilirubin (predominantly direct bilirubin) and total bile acids (TBA), as well as decreased 25-OH-VitD level. On pathological analysis of the biopsied liver tissue, hepatocyte ballooning and cholestatic multinucleate giant cells were noted. The lobular architecture was distorted. Infiltration of inflammatory cells, predominantly lymphocytes, was seen in the portal tracts. In response to the anti-inflammatory and liver protective drugs as well as fat-soluble vitamins over 2 months, the bilirubin and transaminases levels were improved markedly while the TBA kept elevated. Because of persisting hypercholanemia on the follow-up, SLC10A1 gene analysis was performed at his age of 17.2 months. The child proved to be a homozygote of the reportedly pathogenic variant c.800C>T (p. Ser267Phe), while the parents were both carriers. NTCP deficiency was thus diagnosed. The infant was followed up until 34.3 months old. He developed well in terms of the anthropometric indices and neurobehavioral milestones. The jaundice disappeared completely. The liver size, texture and function indices all recovered. However, the hypercholanemia persisted, and the long-term outcome needs to be observed.
Humans
;
Infant
;
Male
;
Organic Anion Transporters, Sodium-Dependent
;
deficiency
;
genetics
;
Symporters
;
deficiency
;
genetics
4.Sodium taurocholate cotransporting polypeptide deficiency manifesting as cholestatic jaundice in early infancy: a complicated case study.
Chinese Journal of Contemporary Pediatrics 2017;19(3):350-354
Sodium taurocholate cotransporting polypeptide (NTCP) deficiency is caused by SLC10A1 mutations impairing the NTCP function to uptake plasma bile salts into the hepatocyte. Thus far, patients with NTCP deficiency were rarely reported. The patient in this paper was a 5-month-19-day male infant with the complaint of jaundiced skin and sclera for 5.5 months as well as abnormal liver function revealed over 4 months. His jaundice was noticed on the second day after birth, and remained visible till his age of 1 month and 13 days, when a liver function test unveiled markedly elevated total, direct and indirect bilirubin as well as total bile acids (TBA). Cholestatic liver disease was thus diagnosed. Due to unsatisfactory response to medical treatment, the patient underwent exploratory laparotomy, cholecystostomy and cholangiography when aged 2 months. This revealed inspissated bile but unobstructed bile ducts. Thereafter, his jaundice subsided, but the aminotransferases and TBA levels gradually rose. Of note, his mother also had mildly elevated plasma TBA. Since the etiology was unclear, no specific medication was introduced. The infant has been followed up over 2 years. The aminotransferases recovered gradually, but TBA levels fluctuated within 23.3-277.7 μmol/L (reference range: 0-10 μmol/L). On SLC10A1 genetic analysis at 2 years and 9 months, both the infant and his mother proved to be homozygous for a pathogenic variant c.800C>T(p.S267F), and NTCP deficiency was thus definitely diagnosed. The findings suggest that, although only mildly increased plasma TBA is presented in adults with NTCP deficiency, pediatric patients with this disorder exhibit persistent and remarkable hypercholanemia, and some patients might manifest as cholestatic jaundice in early infancy.
Humans
;
Infant
;
Jaundice, Obstructive
;
etiology
;
Male
;
Organic Anion Transporters, Sodium-Dependent
;
blood
;
deficiency
;
genetics
;
Symporters
;
blood
;
deficiency
;
genetics
5.Progress in genetic research on pachydermoperiostosis.
Ran DU ; Liangliang FAN ; Hao HUANG ; Rong XIANG
Chinese Journal of Medical Genetics 2016;33(1):105-107
Pachydermoperiostosis is a rare genetic disease characterized by finger clubbing, periostosis, cutis verticis gyrata and pachydermia accompanied by acroosteolysis and hyperhidrosis. Recently, two susceptibility genes, HPGD and SLCO2A1, have been identified, whose protein products are involved in the transportation of prostaglandin and metabolism underlying pachydermoperiostosis. Here the genetic basis of pachydermoperiostosis and its correlation with its clinical phenotype are reviewed, which may provide a reference for basic research and clinic diagnosis for the disease.
Animals
;
Humans
;
Hydroxyprostaglandin Dehydrogenases
;
genetics
;
Organic Anion Transporters
;
genetics
;
Osteoarthropathy, Primary Hypertrophic
;
diagnosis
;
genetics
;
therapy
;
Phenotype
6.New perspectives of biomarkers for the management of chronic hepatitis B.
Clinical and Molecular Hepatology 2016;22(4):423-431
With recent advances in molecular and genomic investigations, the impact of hepatitis B viral and host factors on the progression of chronic HBV infection has been explored. For viral factors, hepatitis B viral load is a strong predictor for liver disease progression. Hepatitis B viral kinetics appear to be important for successful anti-viral therapy. Serum HBsAg level serves as a complementary marker to viral load for the prediction of HBV-related adverse outcomes in patients with low viral load. In those with low viral load, high serum HBsAg level is associated with higher risks of cirrhosis and HCC. Hepatitis B core-related antigen (HBcrAg) induces host immune responses, and the reduction of the HBcrAg level as well as the increment of total anti-HBc level are significantly associated with favorable outcomes. HBV genotypes (genotype C/D) and mutants (basal core promoter and deletion mutation in pre-S genes) are well known viral genetic markers to predict disease progression. For host factors, serum inflammatory biomarkers have been developed to evaluate the HBV-associated hepatic necroinflammation and fibrosis. Host single nucleotide polymorphism on sodium taurocholate cotransporting polypeptide (NTCP, an HBV entry receptor) may be associated with a decreased risk for cirrhosis and HCC. In conclusion, patients with chronic hepatitis B should be evaluated with relevant viral and host markers to identify those who are at a higher risk of liver disease progression and then receive timely antiviral therapy.
Biomarkers/*blood
;
DNA, Viral/blood
;
Hepatitis B Surface Antigens/blood
;
Hepatitis B e Antigens/blood
;
Hepatitis B virus/genetics
;
Hepatitis B, Chronic/complications/*diagnosis/prevention & control
;
Humans
;
Liver Cirrhosis/etiology
;
Organic Anion Transporters, Sodium-Dependent/genetics
;
Polymorphism, Single Nucleotide
;
Risk Factors
;
Symporters/genetics
7.Total saponins from dioscorea septemloba thunb reduce serum uric acid levels in rats with hyperuricemia through OATP1A1 up-regulation.
Yan CHEN ; Xiao-lin CHEN ; Ting XIANG ; Bao-guo SUN ; Hao-xuan LUO ; Meng-ting LIU ; Ze-xiong CHEN ; Shi-jun ZHANG ; Chang-Jun WANG
Journal of Huazhong University of Science and Technology (Medical Sciences) 2016;36(2):237-242
The aim of this study is to evaluate the efficacy of total saponins of Dioscorea (TSD), an extract of the Chinese herbal Bi Xie, on hyperuricemia and to elucidate the underlying mechanisms. The rat hyperuricemia model was established by administration of adenine. Thirty-two rats were randomly allocated into 4 groups: model group, low/high-dose TSD-treated groups, and allopurinol-treated group. Meanwhile, 8 rats were used as normal controls. Serum uric acid (UA), blood urea nitrogen (BUN), serum creatinine (Scr), and organic anion transporting polypeptide 1A1 (OATP1A1) levels were measured. Comparison between the model group and treatment (allopurinol and TSD) groups showed the serum UA levels were significantly decreased in treatment groups. TSD had similar effects to allopurinol. It was found that the OATP1A1 protein expression levels in treatment groups were higher than in model group and normal controls. And different from the allopurinol-treated groups, TSD-treated group had elevated OATP1A1 expression levels in the stomach, liver, small intestine and large intestine tissues. It was suggested that TSD may facilitate the excretion of UA and lower UA levels by up-regulating OATP1A1 expression.
Animals
;
Creatinine
;
blood
;
Dioscorea
;
chemistry
;
Drugs, Chinese Herbal
;
pharmacology
;
therapeutic use
;
Hyperuricemia
;
drug therapy
;
Intestines
;
drug effects
;
metabolism
;
Liver
;
drug effects
;
metabolism
;
Male
;
Organic Anion Transporters, Sodium-Independent
;
genetics
;
metabolism
;
Rats
;
Rats, Sprague-Dawley
;
Saponins
;
pharmacology
;
therapeutic use
;
Stomach
;
drug effects
;
metabolism
;
Up-Regulation
;
Uric Acid
;
blood
8.Identification of the Mutations in the Prostaglandin Transporter Gene, SLCO2A1 and Clinical Characterization in Korean Patients with Pachydermoperiostosis.
Sihoon LEE ; So Young PARK ; Hyun Jin KWON ; Chul Ho LEE ; Ok Hwa KIM ; Yumie RHEE
Journal of Korean Medical Science 2016;31(5):735-742
Pachydermoperiostosis (PDP), or primary hypertrophic osteoarthropathy, is a rare genetic disease affecting both skin and bones. Both autosomal dominant with incomplete penetrance and recessive inheritance of PDP have been previously confirmed. Recently, hydroxyprostaglandin dehydrogenase (HPGD) and solute carrier organic anion transporter family member 2A1 (SLCO2A1) were reported as pathogenic genes responsible for PDP. Both genes are involved in prostaglandin E2 (PGE2) degradation. We aimed to identify responsible genes for PDP and the clinical features in Korean patients with PDP. Six affected individuals and their available healthy family members from three unrelated Korean families with PDP were studied. All of the patients displayed complete phenotypes of PDP with finger clubbing, pachydermia, and periostosis. Mutation analysis revealed a novel heterozygous mutation in the SLCO2A1 gene at nucleotide 302 causing a substitution of the amino acid isoleucine to serine at codon 101 (p.IIe101Ser) in affected individuals. We also identified known SLCO2A1 mutations, one homozygous for c.940+1G>A, and another compound heterozygous for c.940+1G>A and c.1807C>T (p.Arg603*) from two PDP families. Genetic analyses of the PDP patients showed no abnormality in the HPGD gene. Our study further supports the role of mutations in the SLCO2A1 gene in the pathogenesis of PDP and could provide additional clues to the genotype-phenotype relations of PDP.
Bone and Bones/diagnostic imaging
;
Child, Preschool
;
DNA Mutational Analysis
;
Exons
;
Heterozygote
;
Humans
;
Male
;
Middle Aged
;
Organic Anion Transporters/*genetics
;
Osteoarthropathy, Primary Hypertrophic/diagnostic imaging/*genetics/pathology
;
Pedigree
;
Phenotype
;
Polymorphism, Genetic
;
Positron-Emission Tomography
;
Young Adult
9.Genetic diagnosis for a Chinese Han family with primary hypertrophic osteoarthropathy.
Lei WANG ; Juan YU ; Yiming LI ; Xiuping LIU ; Zhaoyun ZHANG
Chinese Journal of Medical Genetics 2015;32(2):213-217
OBJECTIVETo identify the genetic cause for a Chinese Han family affected with primary hypertrophic osteoarthropathy.
METHODSWhole blood and urine samples were collected from a patient and 7 unaffected relatives of the family. The coding sequences and intron/exon boundaries of HPGD and SLCO2A1 genes of the patient were amplified with polymerase chain reaction and sequenced. The genotypes of relatives were subsequently verified. Urinary prostaglandin level was measured with enzyme-linked immunosorbent assay (ELISA).
RESULTSA homozygous 2-bp deletion in HPGD gene (c.310_311delCT, or p.L104AfsX3) was detected in the patient, and 5 heterozygous carriers were identified in the relatives. The urinary prostaglandin E2 (PGE2) level was significantly elevated (P<0.01), while PGE-M was significantly reduced (P<0.01) in the patient.
CONCLUSIONPrimary hypertrophic osteoarthropathy in this family is caused by a homozygous mutation (c.310_311delCT) in the HPGD gene.
Adult ; Asian Continental Ancestry Group ; ethnology ; genetics ; Base Sequence ; Dinoprostone ; urine ; Female ; Humans ; Hydroxyprostaglandin Dehydrogenases ; genetics ; Male ; Molecular Sequence Data ; Mutation ; Organic Anion Transporters ; genetics ; Osteoarthropathy, Primary Hypertrophic ; diagnosis ; enzymology ; ethnology ; genetics ; Pedigree
10.The interactions between natural products and OATP1B1.
Mei-zhi SHI ; Yu LIU ; Jia-lin BIAN ; Meng JIN ; Chun-shan GUI
Acta Pharmaceutica Sinica 2015;50(7):848-853
Organic anion transporting polypeptide 1B1 (OATP1B1) is an important liver-specific uptake transporter, which mediates transport of numerous endogenous substances and drugs from blood into hepatocytes. To identify and investigate potential modulators of OATP1B1 from natural products, the effect of 21 frequently used natural compounds and extracts on OATP1B1-mediated fluorescein methotrexate transport was studied by using Chinese hamster ovary cells stably expressing OATP1B1 (CHO-OATP1B1) in 96-well plates. This method could be used for the screening of large compound libraries. Our studies showed that some flavonoids (e.g., quercetin, quercitrin, rutin, chrysanthemum flavonoids and mulberrin) and triterpenoids (e.g., glycyrrhetinic acid and glycyrrhizic acid) were inhibitors of OATP1B1 with IC50 values less than 16 µmol · L(-1). The IC50 value of glycyrrhetinic acid on OATP1B1 was comparable to its blood concentration in clinics, indicating an OATPlB1-mediated drug-drug interaction could occur. Structure-activity relationship analysis showed that flavonoids had much higher inhibitory activity than their glycosides. Furthermore, the type and length of saccharides had a significant effect on their activity. In addition, we used OATP1B1 substrates fluvastatin and rosuvastatin as probe drugs to investigate the substrate-dependent effect of several natural compounds on the function of OATP1B1 in vitro. Our results demonstrated that the effect of these natural products on the function of OATPlB1 was substrate-dependent. In summary, this study would be conducive to predicting and avoiding potential OATP1B1-mediated drug-drug and drug-food interactions and thus provide the experimental basis and guidance for rational drug use.
Animals
;
Biological Products
;
CHO Cells
;
Cricetulus
;
Drug Interactions
;
Fatty Acids, Monounsaturated
;
pharmacology
;
Flavonoids
;
pharmacology
;
Indoles
;
pharmacology
;
Inhibitory Concentration 50
;
Organic Anion Transporters
;
genetics
;
metabolism
;
Rosuvastatin Calcium
;
pharmacology
;
Structure-Activity Relationship

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