1.Identification and Molecular Characterization of Parkin in Clonorchis sinensis.
Xuelian BAI ; Tae Im KIM ; Ji Yun LEE ; Fuhong DAI ; Sung Jong HONG
The Korean Journal of Parasitology 2015;53(1):65-75
Clonorchis sinensis habitating in the bile duct of mammals causes clonorchiasis endemic in East Asian countries. Parkin is a RING-between-RING protein and has E3-ubiquitin ligase activity catalyzing ubiquitination and degradation of substrate proteins. A cDNA clone of C. sinensis was predicted to encode a polypeptide homologous to parkin (CsParkin) including 5 domains (Ubl, RING0, RING1, IBR, and RING2). The cysteine and histidine residues binding to Zn2+ were all conserved and participated in formation of tertiary structural RINGs. Conserved residues were also an E2-binding site in RING1 domain and a catalytic cysteine residue in the RING2 domain. Native CsParkin was determined to have an estimated molecular weight of 45.7 kDa from C. sinensis adults by immunoblotting. CsParkin revealed E3-ubiquitin ligase activity and higher expression in metacercariae than in adults. CsParkin was localized in the locomotive and male reproductive organs of C. sinensis adults, and extensively in metacercariae. Parkin has been found to participate in regulating mitochondrial function and energy metabolism in mammalian cells. From these results, it is suggested that CsParkin play roles in energy metabolism of the locomotive organs, and possibly in protein metabolism of the reproductive organs of C. sinensis.
Amino Acid Sequence
;
Animals
;
Clonorchis sinensis/*enzymology
;
Cluster Analysis
;
Conserved Sequence
;
DNA, Complementary/genetics
;
Energy Metabolism
;
Gene Expression Profiling
;
Mitochondria/metabolism
;
Models, Molecular
;
Molecular Weight
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Phylogeny
;
Protein Conformation
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Sequence Homology, Amino Acid
;
Ubiquitin-Protein Ligases/chemistry/*genetics/*metabolism
2.Identification and Molecular Characterization of Parkin in Clonorchis sinensis.
Xuelian BAI ; Tae Im KIM ; Ji Yun LEE ; Fuhong DAI ; Sung Jong HONG
The Korean Journal of Parasitology 2015;53(1):65-75
Clonorchis sinensis habitating in the bile duct of mammals causes clonorchiasis endemic in East Asian countries. Parkin is a RING-between-RING protein and has E3-ubiquitin ligase activity catalyzing ubiquitination and degradation of substrate proteins. A cDNA clone of C. sinensis was predicted to encode a polypeptide homologous to parkin (CsParkin) including 5 domains (Ubl, RING0, RING1, IBR, and RING2). The cysteine and histidine residues binding to Zn2+ were all conserved and participated in formation of tertiary structural RINGs. Conserved residues were also an E2-binding site in RING1 domain and a catalytic cysteine residue in the RING2 domain. Native CsParkin was determined to have an estimated molecular weight of 45.7 kDa from C. sinensis adults by immunoblotting. CsParkin revealed E3-ubiquitin ligase activity and higher expression in metacercariae than in adults. CsParkin was localized in the locomotive and male reproductive organs of C. sinensis adults, and extensively in metacercariae. Parkin has been found to participate in regulating mitochondrial function and energy metabolism in mammalian cells. From these results, it is suggested that CsParkin play roles in energy metabolism of the locomotive organs, and possibly in protein metabolism of the reproductive organs of C. sinensis.
Amino Acid Sequence
;
Animals
;
Clonorchis sinensis/*enzymology
;
Cluster Analysis
;
Conserved Sequence
;
DNA, Complementary/genetics
;
Energy Metabolism
;
Gene Expression Profiling
;
Mitochondria/metabolism
;
Models, Molecular
;
Molecular Weight
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Phylogeny
;
Protein Conformation
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Sequence Homology, Amino Acid
;
Ubiquitin-Protein Ligases/chemistry/*genetics/*metabolism
3.Effect of Farnesyltransferase Inhibitor R115777 on Mitochondria of Plasmodium falciparum.
Young Ran HA ; Bae Geun HWANG ; Yeonchul HONG ; Hye Won YANG ; Sang Joon LEE
The Korean Journal of Parasitology 2015;53(4):421-430
The parasite Plasmodium falciparum causes severe malaria and is the most dangerous to humans. However, it exhibits resistance to their drugs. Farnesyltransferase has been identified in pathogenic protozoa of the genera Plasmodium and the target of farnesyltransferase includes Ras family. Therefore, the inhibition of farnesyltransferase has been suggested as a new strategy for the treatment of malaria. However, the exact functional mechanism of this agent is still unknown. In addition, the effect of farnesyltransferase inhibitor (FTIs) on mitochondrial level of malaria parasites is not fully understood. In this study, therefore, the effect of a FTI R115777 on the function of mitochondria of P. falciparum was investigated experimentally. As a result, FTI R115777 was found to suppress the infection rate of malaria parasites under in vitro condition. It also reduces the copy number of mtDNA-encoded cytochrome c oxidase III. In addition, the mitochondrial membrane potential (DeltaPsim) and the green fluorescence intensity of MitoTracker were decreased by FTI R115777. Chloroquine and atovaquone were measured by the mtDNA copy number as mitochondrial non-specific or specific inhibitor, respectively. Chloroquine did not affect the copy number of mtDNA-encoded cytochrome c oxidase III, while atovaquone induced to change the mtDNA copy number. These results suggest that FTI R115777 has strong influence on the mitochondrial function of P. falciparum. It may have therapeutic potential for malaria by targeting the mitochondria of parasites.
Antimalarials/*pharmacology
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Enzyme Inhibitors/*pharmacology
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Farnesyltranstransferase/*antagonists & inhibitors/genetics/*metabolism
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Humans
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Malaria, Falciparum/drug therapy/*parasitology
;
Mitochondria/*drug effects/metabolism
;
Plasmodium falciparum/drug effects/*enzymology/genetics
;
Protozoan Proteins/*antagonists & inhibitors/genetics/metabolism
;
Quinolones/*pharmacology
4.Molecular Identification of Haemadipsa rjukjuana (Hirudiniformes: Haemadipsidae) in Gageo Island, Korea.
Sohyun WON ; Bae Keun PARK ; Baek Jun KIM ; Hye Won KIM ; Jun Gu KANG ; Tae Seo PARK ; Hong Yul SEO ; Ye EUN ; Ki Gyoung KIM ; Joon Seok CHAE
The Korean Journal of Parasitology 2014;52(2):169-175
There are 60 species of blood-feeding land leeches, 50 species belonging to the family Haemadipsidae and 10 species belonging to the family Xerobdellidae. Despite recent papers on the land leeches, their taxonomic identification is not fully understood, especially at a species level. In Korea, there have been no historical records of the terrestrial leeches, but recently an unrecorded blood-feeding land leech was discovered at Gageo-do (Island), Korea. Molecular analysis was used to identify the species of 29 leeches collected from Mt. Dock-Sil in Gageo-do. Conventional PCR was conducted using nuclear 18S rRNA and mitochondrial cytochrome c oxidase subunit 1 (CO1) genetic marker. The 18S rRNA sequences revealed that the leeches share 99.9% identity with Haemadipsa rjukjuana (inhabiting Taiwan), and the CO1 sequences revealed that the leeches are very close to H. rjukjuana (inhabiting Taiwan). The CO1 sequences were separated into 2 categories, 1 with 94.6% and the other with 94.3% similarity to the H. rjukjuana L00115A (inhabiting Taiwan). This new finding of the land leech is the first record in Korea. In addition, the north range of the distribution of the blood-feeding leech (Hirudiniformes: Haemadipisidae) should be reconsidered including Korea.
Animals
;
Base Sequence
;
DNA, Mitochondrial/genetics
;
Electron Transport Complex IV/*genetics
;
Genetic Markers/genetics
;
Leeches/*classification/*genetics
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Mitochondria/enzymology/genetics
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Phylogeny
;
Polymerase Chain Reaction
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RNA, Ribosomal, 18S/*genetics
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Republic of Korea
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Sequence Alignment
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Sequence Analysis, DNA
5.Two Human Cases of Diphyllobothrium nihonkaiense Infection in Korea.
Su Min SONG ; Hye Won YANG ; Min Kyu JUNG ; Jun HEO ; Chang Min CHO ; Youn Kyoung GOO ; Yeonchul HONG ; Dong Il CHUNG
The Korean Journal of Parasitology 2014;52(2):197-199
Diphyllobothrium latum and Diphyllobothrium nihonkaiense are the 2 reported main causes of human diphyllobothriasis in the Republic of Korea. However, the differentiation of these 2 species based on morphologic features alone is difficult. The authors used nucleotide sequencing of the mitochondrial cytochrome c oxidase subunit 1 (cox1) gene to diagnose Diphyllobothrium spp. Two patients visited the emergency room at Kyungpook National University Hospital on 3 April and 12 April 2013, respectively, with fragments of parasites found while defecating. The parasites were identified as Diphyllobothrium spp. based on morphologic characteristics, and subsequent cox1 gene sequencing showed 99.9% similarity (1,478/1,480 bp) with D. nihonkaiense. Our findings support the hypothesis that D. nihonkaiense is a dominant species in Korea.
Adult
;
Animals
;
Anthelmintics/therapeutic use
;
Base Sequence
;
DNA, Helminth/*genetics
;
Diphyllobothriasis/*diagnosis/drug therapy
;
Diphyllobothrium/*genetics
;
Electron Transport Complex IV/*genetics
;
Humans
;
Male
;
Middle Aged
;
Mitochondria/enzymology
;
Phylogeny
;
Praziquantel/therapeutic use
;
Republic of Korea
;
Sequence Analysis, DNA
;
Young Adult
6.Clinical, biochemical and genetic analysis of the mitochondrial disorders presenting with cardiac damage.
Yan-yan MA ; Tong-fei WU ; Yu-peng LIU ; Qiao WANG ; Xi-yuan LI ; Yuan DING ; Jin-qing SONG ; Yan-ling YANG
Chinese Journal of Pediatrics 2013;51(12):909-914
OBJECTIVEMitochondrial disease is a group of energy metabolic disorders, characterized by involvement of multisystem with high energy requirements. Encephalomyopathies are common clinical findings of the mitochondrial diseases. However, mitochondrial cardiac damage is not rare. In this study, the clinical, biological, and genetic analyses were performed in three patients with mitochondrial cardiac damage, in order to understand the characteristics of mitochondrial diseases.
METHODThree girls presented with arrhythmia and cardiac enlargement from the age of 3, 4 and 8 years respectively. They were admitted into the Peking University First Hospital. Infection, autoimmune diseases, aminoacidopathies, organic acidurias, mitochondrial-fatty acid oxidation defects, and lysosomal storage disease were excluded by routine laboratory examinations and metabolic analysis for blood amino acids, acylcarnitines, urinary organic acids, and lysosome activity assay. Peripheral leukocytes mitochondrial respiratory chain enzyme I to V activities were measured by spectrophotometry. The entire sequence of the mitochondrial DNA was analyzed.
RESULTIn two patients (case 1 and case 3), hypertrophic cardiomyopathy and grade I to grade II of cardiac function were found. One patient (case 2) was diagnosed with arrhythmia and grade I of cardiac function. Increased creatine phosphokinase and creatine kinase isoenzyme MB were observed. Mitochondrial respiratory chain complex deficiencies were indentified in the three patients. Patient 1 had combined deficiencies of complex III and V. The activity of complex I+III was 18.7 nmol/(min·mg mitochondrial protein) (control 84.4 ± 28.5). The activity of complex V was 20.4 nmol/(min·mg mitochondrial protein) (control 103.7 ± 29.2). In her mitochondrial gene, A14693G on tRNA(Glu) and T16519C on D-loop were found. Patient 2 had an isolated complex I deficiency. The activity was 22.0 nmol/(min·mg mitochondrial protein) (control 44.0 ± 5.4). A16183C, T16189C and G15043A mutations on D-loop were found. Patient 3 had a combined deficiency of complex IV and V. The activity of complex IV was 21.0 nmol/(min·mg mitochondrial protein) (control 54.1 ± 12.3). The activity of complex V was 23.2 nmol/(min·mg mitochondrial protein) (control 103.7 ± 29.2). C253T and C16187T mutations on D-loop were detected. Haplotype analysis showed that three patients belong to H2a2a. Improvement was observed after the treatment with L-carnitine, coenzyme Q10, vitamin C and E. At present, the patients are 7, 5 and 8 years old. Although excise intolerance still persists, they had a good general condition with normal school life.
CONCLUSIONThe mitochondrial diseases with cardiac damage show cardiomyopathy, arrhythmia and exercise intolerance. Many kinds of mitochondrial respiratory chain deficiency were observed. A14693G in mitochondrial tRNA(Glu) gene is probably one of the causes in China.
Arrhythmias, Cardiac ; diagnosis ; genetics ; metabolism ; Biomarkers ; blood ; urine ; Cardiomyopathy, Hypertrophic ; diagnosis ; genetics ; metabolism ; Child ; Child, Preschool ; DNA Mutational Analysis ; DNA, Mitochondrial ; genetics ; Electron Transport Chain Complex Proteins ; deficiency ; genetics ; metabolism ; Female ; Humans ; Male ; Mitochondria, Heart ; enzymology ; pathology ; Mitochondrial Diseases ; diagnosis ; genetics ; metabolism ; Mutation
7.Effects of acupuncture and moxibustion on energy metabolism-related protein of hippocampal neuron mitochondria in Alzheimer's disease rats.
Lei LUO ; Guo-Jie SUN ; Yan-Jun DU
Chinese Acupuncture & Moxibustion 2013;33(10):913-918
OBJECTIVETo explore action mechanism of acupuncture and moxibustion for Alzheimer's disease (AD) to provide evidence for prevention and treatment with acupuncture and moxibustion on AD in clinic.
METHODSEighty SPF-grade male Wistar rats, (200 +/- 20) g, were randomly divided into a normal group, a sham-operation group, a model group and a treatment group, 20 cases in each one. The model was duplicated with injection of Abeta1-42 in rats' hippocampus. Expect the treatment group, the rest groups were treated with regular feeding after respective intervention. The treatment group was treated with acupuncture and moxibustion at "Baihui" (GV 20) and "Shenshu" (BL 23), once a day, seven days as a treatment course and totally for two courses. There was one day of interval between the courses. The immunohistochemistry and quantitative RT-PCR methods were applied to test level of Abeta-binding alcohol dehydrogense (ABAD) and cytochrome oxidase IV (COX IV) in hippocampal neurons mitochondria.
RESULTSAcupuncture and moxibustion could reduce effectively level of ABAD and improve activity of COX IV in hippocampal neurons mitochondria in the treatment group, which has statistical significance compared with that in the model group (P < 0.01) and no statistical significance compared with that in the normal group and sham-operation group (P > 0.05). This indicated that acupuncture and moxibustion could effectively suppress overexpression of ABAD, improve activity of COX IV and reduce leak of reactive oxygen species, which could improve metabolic disturbance of mitochondria energy to achieve the goal of prevention and treatment of AD.
CONCLUSIONThe prevention and treatment of AD with acupuncture and moxibustion could be related with suppressing overexpression of ABAD and improving activity of COX IV in hippocampal neurons mitochondria to improve mitochondria energy metabolism.
3-Hydroxyacyl CoA Dehydrogenases ; genetics ; metabolism ; Acupuncture Therapy ; Alzheimer Disease ; enzymology ; metabolism ; therapy ; Animals ; Electron Transport Complex IV ; genetics ; metabolism ; Energy Metabolism ; Hippocampus ; cytology ; enzymology ; metabolism ; Humans ; Male ; Mitochondria ; enzymology ; metabolism ; Moxibustion ; Neurons ; enzymology ; metabolism ; Rats ; Rats, Wistar
8.Hydroxydibenzoylmethane induces apoptosis through repressing ornithine decarboxylase in human promyelocytic leukemia HL-60 cells.
Ming Fu WANG ; Ya Fan LIAO ; Ying Cheng HUNG ; Chih Li LIN ; Tzyh Chyuan HOUR ; Ko Huang LUE ; Hui Chih HUNG ; Guang Yaw LIU
Experimental & Molecular Medicine 2011;43(4):189-196
Ornithine decarboxylase (ODC) is the rate-limiting enzyme in polyamine biosynthesis and a target for chemoprevention. Hydroxydibenzoylmethane (HDB), a derivative of dibenzoylmethane of licorice, is a promising chemopreventive agent. In this paper, we investigated whether HDB would inhibit the ODC pathway to enhance apoptosis in human promyelocytic leukemia HL-60 cells. We found ODC enzyme activity was reduced during HDB treatment. Overexpression of ODC in HL-60 parental cells could reduce HDB-induced apoptosis, which leads to loss of mitochondrial membrane potential (Deltapsim), through lessening intracellular ROS. Furthermore, ODC overexpression protected cytochrome c release and the activation of caspase-3 following HDB treatment. The results demonstrated HDB-induced apoptosis was through a mechanism of down-regulation of ODC and occurred along a ROS-dependent mitochondria-mediated pathway.
Apoptosis/*drug effects
;
Caspase 3/metabolism
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Chalcones/metabolism/*pharmacology
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Chemoprevention
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Cytochromes c/biosynthesis/secretion
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Down-Regulation
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Gene Expression
;
HL-60 Cells
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Humans
;
Immunoblotting
;
Leukemia, Myeloid/*enzymology/pathology
;
Membrane Potential, Mitochondrial/drug effects
;
Mitochondria/enzymology
;
Ornithine Decarboxylase/antagonists & inhibitors/genetics/*metabolism
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Reactive Oxygen Species/analysis/metabolism
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Reverse Transcriptase Polymerase Chain Reaction
9.Detection of bovine, goat, pig and chicken derived ingredients in animal products with universal PCR-microarray method.
Fengyun SHI ; Jiankun MIAO ; Liping ZHANG ; Hong TAO ; Jianqiang LÜ ; Zhouxi RUAN ; Hui ZONG
Chinese Journal of Biotechnology 2010;26(6):823-829
We analyzed the sequence of vertebrate molecular marker genes, then we selected the mitochondrial DNA (mtDNA) 16S rRNA gene as marker gene. In order to detect four kinds of animal-derived ingredients, which including bovine, goat, pig and chicken. We utilized a pair of universal primers, designed four sets of species-specific microarray probes and two pairs of quality control probes. We optimized the PCR amplifications and hybridization conditions, therefore these four kinds of animal-derived ingredients could be rapid and accurate detected by this approach. The detection limits were all reaches 1 pg. We established the detection platform of these four kinds of animal-derived ingredients. This universal PCR-microarray assay provides a new method for the identification of animal-derived ingredients in the import-export field.
Animal Feed
;
analysis
;
Animals
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Cattle
;
Chickens
;
DNA, Mitochondrial
;
genetics
;
Food Contamination
;
analysis
;
Goats
;
Meat
;
analysis
;
Microarray Analysis
;
methods
;
Mitochondria, Muscle
;
enzymology
;
genetics
;
Polymerase Chain Reaction
;
methods
;
RNA, Ribosomal, 16S
;
genetics
;
Sensitivity and Specificity
;
Swine
10.Suppression of ROS generation by 4,4'-diaminodiphenylsulfone in non-phagocytic human diploid fibroblasts.
Sung Chun CHO ; Ji Heon RHIM ; Young Hoon SON ; Suk Jin LEE ; Sang Chul PARK
Experimental & Molecular Medicine 2010;42(3):223-232
The action mode of 4,4'-diaminodiphenylsulfone (DDS) is still under debate, although it has long been used in treatment of several dermatologic diseases including Hansen's disease. In this study, we tested the effect of DDS as an antioxidant on paraquat-induced oxidative stress in non-phagocytic human diploid fibroblasts (HDFs). Overall, preincubation of HDFs with DDS prevented the oxidative stress and the resulting cytotoxic damages caused by paraquat in these cells. The specific effects of DDS in paraquat-treated HDFs are summarized as follows: a) reducing the expression of NADPH oxidase 4 (NOX4) by inhibiting paraquat-induced activation of PKC; b) inhibiting paraquat-induced decreases in mitochondrial complex protein levels as well as in membrane potentials; c) consequently, inhibiting the generation of cytosolic and mitochondrial superoxide anions. Taken together, these findings suggest that DDS would suppress the radical generation in non-phagocytic HDFs during oxidative stress, and that DDS might have the extended potential to be used further in prevention of other oxidative stress-related pathologies.
Biphenyl Compounds/metabolism
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Cell Death/drug effects
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Cell Survival/drug effects
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Dapsone/*pharmacology
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*Diploidy
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Enzyme Activation/drug effects
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Fibroblasts/*cytology/drug effects/enzymology/*metabolism
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Free Radical Scavengers/metabolism
;
Gene Expression Regulation, Enzymologic/drug effects
;
Humans
;
Male
;
Mitochondria/drug effects/pathology
;
NADPH Oxidase/genetics/metabolism
;
Paraquat/toxicity
;
Phagocytosis/drug effects
;
Picrates/metabolism
;
Protein Kinase C/metabolism
;
RNA, Messenger/genetics/metabolism
;
Reactive Oxygen Species/*metabolism
;
Superoxides/metabolism

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