2.Investigation of a measles outbreak caused by genotype D8 virus in Pinghu city of Zhejiang province, 2017.
R YAN ; B HE ; F Y YAO ; Z L XIANG ; H Q HE ; S Y XIE ; Y FENG
Chinese Journal of Epidemiology 2018;39(3):333-336
Objective: To investigate the epidemiological characteristics of measles outbreak caused by genotype D8 virus in Pinghu city of Zhejiang province, and provide evidence for the control of the outbreak. Methods: The measles outbreak data were collected through National Measles Surveillance System. The outpatient records and admission records were checked, field investigation and outbreak response were conducted. Blood samples in acute phase and swab specimens were collected from the patients for laboratory testing, including serology test, RNA extraction and amplification, measles virus isolation and genotype identification. Software SPSS 17.0 and Excel 2016 were used for data analysis. Results: A total of 10 confirmed measles cases were reported in Pinghu city, and 8 cases were aged >40 years. Six blood samples were collected, in which 5 were measles D8 virus positive and 1 was negative in measles virus detection. There were epidemiological links among 10 cases which occurred in a factory, a hospital and a family at the same time. There was no statistical difference in symptoms among cases caused by D8 virus and H1a virus. After the emergent measles vaccination, the measles outbreak was effectively controlled. Conclusion: Untimely response due to the uneasy detection of measles cases in the early stage, nosocomial infection and weak barrier of measles immunity in adults might be the main reasons for this outbreak. Measles vaccination is effective in the prevention of measles D8 virus infection. It is necessary to strengthen measles genotype monitoring for the tracing of infection source and control of outbreaks.
Adult
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Amplified Fragment Length Polymorphism Analysis
;
Child
;
Cross Infection
;
Disease Outbreaks
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Genotype
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Hospitalization
;
Humans
;
Measles/virology*
;
Measles virus/isolation & purification*
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Outpatients
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Population Surveillance
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RNA, Viral/genetics*
;
Sequence Analysis, DNA
3.Genetic characteristics of hemagglutinin in measles viruses isolated in Henan Province, China.
Da-Xing FENG ; Ming-Hua SENG ; Qian LIU ; Zhen-Ying ZHANG
Chinese Journal of Virology 2014;30(2):134-137
This study aims to investigate the genetic characteristics of hemagglutinin in wild-type measles viruses in Henan Province, China and to provide a basis for measles control and elimination. Specimens were collected from suspected measles cases in Henan during 2008-2012. Cell culture was performed for virus isolation, and RT-PCR was used to amplify hemagglutinin gene. The PCR products were sequenced and analyzed, including construction of phylogenetic tree and analysis of the distance between the isolated virus and the reference virus; then, the variations in predicted amino acids were analyzed. The results showed that 12 measles viruses were isolated in Henan Province and identified as H1a genotype; the nucleotide and amino acid homologies were 98.0%-100% and 97.2%-99.8%, respectively. One glycosylation site changed in all the 12 sequences because of the amino acid mutation from serine to asparagine at the 240th site, as compared with Edmonston-wt. USA/54/A. Overall, the wild-type measles virus genotype circulating in Henan Province from 2008 to 2012 was H1a, with high homology between strains; there were some variations in amino acid sequences, resulting in glycosylation site deletion.
China
;
Hemagglutinins
;
genetics
;
Humans
;
Measles
;
virology
;
Measles virus
;
classification
;
genetics
;
isolation & purification
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Molecular Sequence Data
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Phylogeny
;
Viral Proteins
;
genetics
4.Imported B3 genotype measles viruses were isolated from measles cases in the Chinese mainland.
Shu-Lei WANG ; Chong-Shan LI ; Hui-Ling WANG ; Wei TANG ; Song JIN-HUA ; Jin-Hua YANG ; Shi-Wen WANG ; Yan ZHANG ; Wen-Bo XU
Chinese Journal of Virology 2014;30(5):535-540
We isolated and identified the genotypes and molecular characteristics of the imported B3 measles virus (MeV) in the Chinese mainland. The Vero/SLAM cell line was used to isolate the viruses. Reverse transcription-polymerase chain reaction was undertaken to amplify the 450 nucleotide acids of the 3-terminal of the nucleoprotein gene. A phylogenetic tree was constructed and similarities in homology assessed. Results suggested that the Shanghai isolates MVi/Shanghai. CHN/38. 13/02 [B3] and MVi/Shanghai. CHN/40. 13/02[B3] were clustered within the same genotype group as the World Health Organization (WHO) B3 genotype reference strain. The number of differences in nucleotide acids between the two Shanghai isolates was one. The homology of nucleotide acids between the Shanghai isolates and the WHO B3 genotype reference strain (MVi/Ibadan. NGA/0.97/1/B3) was 98%. Comparative results from the Measles Nucleotide Surveillance system suggested that the sequences of Shanghai isolates and the 2013 vi- ruses from Australia, Japan, Korea, Hong Kong China, Philippines and Iran were identical. This is the first time that the B3 genotype of MeV in the Chinese mainland has been isolated since 1993. These data can be used to create a "baseline" of genetic information for measles viruses in China, and help to trace the transmission of measles viruses in China and the rest of the world.
China
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Genotype
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Humans
;
Measles
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virology
;
Measles virus
;
classification
;
genetics
;
isolation & purification
5.Variations on hemagglutinin gene of Zhejiang measles virus strains and differences with measles strains circulated both at home and abroad.
Yan FENG ; Shu-ling ZHONG ; Chang-ping XU ; Yi-yu LU
Chinese Journal of Preventive Medicine 2013;47(7):616-621
OBJECTIVETo investigate the variations on hemagglutinin (H) gene of measles virus (MV) in Zhejiang province, and to analyze the differences with strains circulated both at home and abroad.
METHODSIn total, 33 MV strains isolated in Zhejiang province between 1999 and 2011 were collected.RNA of the isolated MV strains was extracted and the complete sequences on H gene were amplified using RT-PCR assay. The products were compared with the Chinese vaccine strain Shanghai-191, which was downloaded from GenBank, and other 95 different MV strains from all over the world.
RESULTS33 MV strains, isolated from the throat swab specimens collected from MV patients in Zhejiang province during 1999 to 2001, were used to conduct phylogenetic analysis with MV strains circulated in other areas of China during 1993 to 2007. The phylogenetic tree based on H gene sequences showed that all the Zhejiang MV strains located in H1a cluster, and no apparent time series and geographic restrictions were observed. Compared to the referenced vaccine strain Shanghai-191, the average variation rate on nucleotides and amino acids, and the evolutionary rate of H1a viruses from China during 2003 to 2011 were separately 5.15%, 4.44% and 5.81%, which were higher than the rates of H1a viruses during 1965 to 1993 (4.75%, 3.86% and 5.30%), and the rates of viruses during 1994 to 2002 (4.80%, 4.08% and 5.37%).However, the dn/ds ratios of strains within the three time periods were 0.19,0.21 and 0.23 respectively, which indicated that no evidence of positive selection was found on H1a MV strains during 1993 to 2011. A 24 stable amino acid variation sites on H gene was found between H1a viruses during 2003 to 2011 and the vaccine strain Shanghai-191. The largest variation occurred between vaccine and H1a strains, with 0.053 of the p-distance and 26-28 of amino acid mutations.However, only 15 stable amino acid variations were found between vaccine strain and genotype B3 or D4 strains.In addition, significant differences were found between H1a viruses and genotype B or D viruses, with 0.074 and 0.071 of p-distance and 27-33 of amino acid differences.
CONCLUSIONSignificant differences were found on H gene between MV strains subtype H1a and vaccine strains and other genotype strains. The variations were enlarged with the time coursing; therefore, the surveillance on variation of Chinese MV strains should be taken into account.
China ; epidemiology ; Genotype ; Hemagglutinins, Viral ; genetics ; Humans ; Measles ; epidemiology ; virology ; Measles virus ; classification ; genetics ; isolation & purification
6.Genetic characterization analysis on the first imported measles virus of genotype D8 in Chinese mainland.
Xiao-Dong SUN ; Chong-Shan LI ; Xian TANG ; Zhi LI ; Yan ZHANG ; Wei TANG ; Jing WANG ; Hui-Ling WANG ; Yan-Ji YANG ; Jia LI ; Zheng-An YUAN ; Wen-Bo XU
Chinese Journal of Virology 2013;29(6):583-588
This study analyzed the genetic characterization on first imported measles virus of genotype D8 in Chinese mainland. Serums were collected from the suspicious MV patients to detect IgM antibody in ELISA. Throat swabs were cultured in Vero/SLAM cell line to get measles virus isolates. Part of the nucleotide sequence of the 3' terminus of nucleoprotein (N) gene of these isolates were amplified by RT-PCR, and the amplicons were directly sequenced. The phylogenetic analysis was based on the nucleotide sequence about 456 base pairs of the 3' terminus of nucleoprotein (N) gene. Results showed that it reported 1 105 suspicious measles cases in shanghai, 2012, including 590 confirmed cases and 2 clinical case. The reported morbidity was 2.52 per one hundred thousand. 247 measles viruses were isolated from 984 throat swabs specimen. Most of them belonged to sub-genotype H1a except Shanghai12-239 was genotype D8. The homology of nucleotide and amino acid sequences were 97.8% and 98.6% respectively between Shanghai12-239 and WHO reference strain (Manchester. UNK30.94(D8)AF280803). Those were 89.6%-94.5% and 88.7%-95.3% between Shanghai12-239 and WHO reference strains of other genotypes.
Adolescent
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Adult
;
Aged
;
Child
;
Child, Preschool
;
China
;
Female
;
Genotype
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Humans
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Infant
;
Male
;
Measles
;
virology
;
Measles virus
;
classification
;
genetics
;
isolation & purification
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Middle Aged
;
Molecular Sequence Data
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Phylogeny
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Travel
;
Viral Proteins
;
genetics
;
Young Adult
7.Simultaneous detection of measles and rubella virus by multiplex real-time RT-PCR with an internal control.
Bei-Bei YU ; Yan FENG ; Chang-Ping XU ; Yi-Yu LU ; Jing QIAN
Chinese Journal of Virology 2010;26(2):109-114
Measles and rubella virus cause fever rash diseases that are uneasy to differentiate clinically from each other. Specific primers and fluorescence-labeled probes were designed, and a multiplex Real-time RT-PCR with an internal control was developed to simultaneously identify the measles and rubella virus. The multiplex Real-time RT-PCR assay was specific and no false positive or false negative results were found. The sensitivity of the assay was 0.1TCID50/mL and 1TCID50/mL for measles and rubella virus respectively. Analysis with 0.1-10(3)TCID50/mL measles or rubella virus samples demonstrated high validity and reproducibility with the coefficient of variability(CV) of below 0.9% for both measles and rubella virus. Using ribonuclease P (RNase P) as internal false negative control, the developed multiplex Real-time RT-PCR assay is suitable for rapid clinical diagnosis of measles and rubella virus.
Fluorescent Dyes
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Humans
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Measles
;
diagnosis
;
virology
;
Measles virus
;
genetics
;
RNA, Viral
;
genetics
;
isolation & purification
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Reproducibility of Results
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Reverse Transcriptase Polymerase Chain Reaction
;
methods
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Ribonuclease P
;
genetics
;
Rubella
;
diagnosis
;
virology
;
Rubella virus
;
genetics
;
Sensitivity and Specificity
8.The first imported measles case associated with genotype D4 measles virus in China.
Hui-Ling WANG ; Lei ZHENG ; Ji-Tao WANG ; Hui GAO ; Yan ZHANG ; Xiao-Hui KONG ; Wen-Bo XU
Chinese Journal of Virology 2010;26(2):103-108
This study reported the first imported measles case associated with genotype D4 measles virus in Shanxi province in China. The clinical specimen of throat swab was inoculated into Vero/SLAM culture to isolate the virus. A RT-PCR (Reverse transcription polymerase chain reaction, RT-PCR) was performed to amplify the 676 nucleotides sequence corresponding to the carboxyl terminus of measles virus nucleoprotein. The phylogenetic tree based on the 450 nucleotide acids of carboxyl terminus of N protein was constructed and the homology similarity was analyzed. The Shanxi isolate MVi/Shanxi. CHN/20. 09/1 was clustered within the same genotype group with WHO genotype D4 reference strain, Montreal. CAN/89, and the homology of nucleotide acid between Shanxi isolate and WHO genotype D4 reference strain was 97.3%. The homology of nucleotide acid and amino acid between Shanxi isolate and 2009 genotype D4 representative strain circulating in USA, Canada, India and Russian were 98.0%-100% and 97.3%-100%, respectively. These results showed that the virus isolated from the imported measles case was genotype D4. This is the first report that the genotype D4 measles virus was imported and isolated in China. It is important to accumulate baseline data of China and help to measure transmission pathways and to clarify epidemiological links.
Animals
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Antibodies, Viral
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blood
;
immunology
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Cercopithecus aethiops
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China
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Enzyme-Linked Immunosorbent Assay
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France
;
ethnology
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Genotype
;
Humans
;
Immunoglobulin M
;
blood
;
immunology
;
Male
;
Measles
;
blood
;
diagnosis
;
virology
;
Measles virus
;
classification
;
genetics
;
immunology
;
Phylogeny
;
Reverse Transcriptase Polymerase Chain Reaction
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Sequence Analysis, DNA
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Vero Cells
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Young Adult
9.Comparative analysis of measles genome between vaccine strain and wild-type strain in Zhejiang province of China.
Chang-ping XU ; Ju-ying YAN ; Yan FENG ; Hai-yan MAO ; Yi-yu LU
Chinese Journal of Preventive Medicine 2009;43(8):723-726
OBJECTIVETo explore the distinction between wild-type strain MVi/Zhejiang, CHN/7.05/4 and vaccine strain Shanghai-191 at genome level.
METHODSAfter sequencing of measles wild-stain MVi/Zhejiang. CHN/7.05/4, the distinction between the wild-type strain and the vaccine strain was analysed by MEGA 3.1 software at genome level, and the antigen variation was studied by means of combining the epidemiological data.
RESULTSThere were 822 nucleotide differences (5.17%) and 161 amino acid differences between these two strains, including three glycosylation sites variation found. Meanwhile, the antigen ratio between wild-type strain and vaccine strain was found to be 5.66.
CONCLUSIONThere should be certain differences between the contemporary wild-type strain MVi/Zhejiang, CHN/7.05/4 and vaccine strain Shanghai-191 at genome level, and the protective effects of measles vaccine should be studied further.
Antigenic Variation ; China ; epidemiology ; Comparative Genomic Hybridization ; Genome, Viral ; Humans ; Measles ; epidemiology ; prevention & control ; virology ; Measles Vaccine ; genetics ; Measles virus ; classification ; genetics ; immunology ; Sequence Analysis, Protein ; Sequence Analysis, RNA
10.Epidemiological Investigation of a Measles Outbreak in a Preschool in Incheon, Korea, 2006.
Jae Sung SO ; Un Yeong GO ; Dong Han LEE ; Koang Suk PARK ; Jong Koo LEE
Journal of Preventive Medicine and Public Health 2008;41(3):153-158
OBJECTIVES: This study describes a plan that was designed to prevent a measles outbreak that showed a changed outbreak pattern. This study is based on the epidemiological investigation of a measles outbreak in a preschool in Incheon, Korea, 2006. METHODS: The subjects were 152 students at a preschool where a measles outbreak occurred. A questionnaire survey was conducted and serological testing for measlesspecific IgM was preformed. RESULTS: Of the fifteen confirmed, identified cases, eleven patients had been vaccinated with one dose, one patient had received two doses and three patients were unvaccinated. The three unvaccinated cases consisted of one 5-year-old child, one 3-year-old child and one 16-month-old infant. For the cases with one dose of the vaccination, there were 11 cases, which consisted of six 5-year-old children, two 4-year-old children, two 3-year-old children and one 2-year-old child. The case with two doses of the vaccination was one 4-year-old child. The attack rate of measles was 100% in the 0-dose group, 11.2% in the 1-dose group and 2.0% in the 2-dose group. The vaccine's efficacy was 88.8% in the 1-dose group and 98.0% in the 2-dose group. The vaccine effectiveness for the 2-dose group was higher than that of the 1-dose group. CONCLUSIONS: High coverage with a 2-dose vaccination should be maintained, and the vaccination should be given at the suitable time to prevent a measles outbreak with a changed outbreak pattern.
Child, Preschool
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*Disease Outbreaks/prevention & control
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Humans
;
Immunization Programs
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Korea
;
Measles/*epidemiology/immunology/*prevention & control/virology
;
Measles Vaccine/*administration & dosage
;
Preventive Medicine
;
Questionnaires

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