1.Purification and physicochemical characterisation of Aspergillus niger USM F4 β-mannanase
Ab Rashid Syarifah ; Ibrahim Darah ; Che Omar Ibrahim ; Hassan Ramli ; Woei Yenn Tong
Malaysian Journal of Microbiology 2020;16(5):396-406
Aims:
This present study focused on purification of fungal β-mannanase produced by Aspergillus niger USM F4 and
also physicochemical characterisation of the purified enzyme.
Methodology and results:
The purified β-mannanase with a molecular mass of ~47.4 kDa was demonstrated on SDSPAGE gel. The enzyme signified a purification degree of 4-fold, with final specific activity of 196.42 U/mg. It reached an
optimum catalytic activity at pH 4.0 and 60 °C. The thermal stability of the enzyme was up to 70 °C and maintained the
50% activity after 30 min at 80 °C. Meanwhile, the pH stability was in the range of pH 3.0-9.0 and a 30 min half-life at pH
10.0. All chemical substances manifested an inhibitory effect on purified β-mannanase, with SDS (28.16 ± 0.05%
residual activity) as the strongest inhibitor, followed by cupric ion (Cu2+) (49.51 ± 0.09% residual activity). As a whole, the
enzyme displayed a substrate specificity in the order of locust bean gum (LBG) > carboxymethylcellulose > soluble
starch > xylan from oat spelt > α-cellulose. Its preference for LBG has generated the Km and Vmax values of 0.20 mg/mL
and 9.82 U/mL, respectively.
Conclusion, significance and impact of study
The outcomes of our study offer potential for use at industrial scales,
particularly in the oligosaccharides production that involve acid-related activity, wide-ranging temperature and pH
stability.
Aspergillus niger
;
beta-Mannosidase
2.Beta-1,3-glucomannanase assisted lipid extraction from Rhodosporidium toruloides.
Guojie JIN ; Xiaobing YANG ; Hongwei SHEN ; Yanan WANG ; Zhiwei GONG ; Zongbao K ZHAO
Chinese Journal of Biotechnology 2013;29(11):1581-1589
To evaluate the effectiveness of enzymatic assisted extraction (EAE) of lipid from the oleaginous yeast Rhodosporidium toruloides in the presence of beta-1,3-glucomannanase at a larger scale, we investigated the effects of enzymatic treatment and extraction conditions on lipid extraction yields at 10-L scale by using the broth of R. toruloides Y4 as the feed and ethyl acetate as the solvent. When it was treated for 0.5 h, the lipid extraction yield reached 71.1%, indicating that the enzymatic treatment process reached similar efficiency to that obtained at 10-mL scale. The inhibitory effect of emulsification was greatly reduced by repeated extraction. After extracted for three times, yields of lipid extraction, solvent recovery and total material recovery reached 92.9%, 87.0% and 94.2% respectively. As it can use the lipid production slurry with good extraction efficiency, EAE technology is promising for industrial production of microbial lipids.
Basidiomycota
;
metabolism
;
Biofuels
;
Bioreactors
;
Fermentation
;
Industrial Microbiology
;
Lipids
;
biosynthesis
;
isolation & purification
;
beta-Mannosidase
;
metabolism
3.Construction of yeast Pichia pastoris to produce Man5GlcNAc2 mammalian mannose-type glycoprotein.
Xiaopeng YANG ; Bo LIU ; Miao SONG ; Xin GONG ; Shaohong CHANG ; Kuijing XUE ; Jun WU
Chinese Journal of Biotechnology 2011;27(1):108-117
Glycosylation is vital for activity, higher structure and function of protein. Glycoproteins derived from yeast contain N-glycan of high mannose type and are usually hyperglycosylated, while those from mammalian cells contain N-glycan of hybrid or complex type. We introduced the alpha-1,2-mannosidase I (MDSI) into yeast cells, which catalyzed an essential proceeding of N-glycan structures from Man8GlcNAc2 to Man5GlcNAc2. The plasmids contained MDSI genes from Homo sapiens [HMDSI(delta185)] or Arabidopsis thaliana [ATMDSI(delta48)], and three ER-signals were used to be transformed a mutant Pichia pastoris GJK01, respectively. The reporter protein HSA/GM-CSF (human serum albumin and granulocyte-macrophage colony stimulating factor fusion protein) was expressed and its N-glycans were analyzed by DSA-FACE (DNA sequencer assisted fluorophore-assisted carbohydrate electrophoresis). The plasmid contained ER-ScMnsI-ATMDSI(delta48) was expressed in Pichia pastoris, the Man5GlcNAc2 N-glycan on secreted glycoprotein HSA/GM-CSF was observed. The research reported here provided basic substrate to obtain the hybrid- and complex-type glycans in mammalian cell.
Gene Transfer Techniques
;
Genetic Vectors
;
genetics
;
Glycoproteins
;
biosynthesis
;
Glycosylation
;
Humans
;
Mannose
;
biosynthesis
;
Oligosaccharides
;
biosynthesis
;
genetics
;
Pichia
;
genetics
;
metabolism
;
Recombinant Proteins
;
biosynthesis
;
genetics
;
alpha-Mannosidase
;
genetics
4.Directed evolution by error-prone PCR of Armillariella tabescens MAN47 beta-mannanase gene toward enhanced thermal resistance.
Xiaohui LÜ ; Yadong HU ; Fengjuan HU ; Daling LIU ; Dongsheng YAO
Chinese Journal of Biotechnology 2009;25(12):1900-1906
Firstly, We used error-prone PCR to induce mutations on Armillariella tabescens MAN47 beta-mannanase gene, Secondly, we cloned the mutated fragments into secreted expression vector pYCalpha, Then the recombinant plasmids were transformed into Saccharomyces cerevisiae BJ5465 after amplified and extracted in DH5alpha cells. Through three cycles of error-prone PCR we built a mutant database, Then we screened one optimum (named M262) from about 104 mutants. The evoluted MAN47 beta-mannanase displayed both higher thermal stability and activity than wide type. The evoluted enzyme M262 retained high activity after treatment at 80 degrees C for 30 min, whereas, the wild type nearly lost activity under this condition. Meanwhile, the activity of M262 can reach to 25 U/mL, which is 4.3 times as wide type under optimum temperature. In addition, pH stability and pH range of evoluted enzyme M262 were both improved compared with wild-type enzyme. The optimum pH was estimated to be similar to that of wild-type enzyme. The sequence comparison illustrated that there were three nucleotide substitutions (T343A/C827T/T1139C) which carried corresponding amino acid changes (Ser115Thr/Thr276Met/Val380Ala). According to homologous modeling by SWISS-MODEL Repository, three mutated amino acids located at the sixth amino acid of the fourth beta-sheet, the first amino acid of the sixth alpha-helix, the turn between the tenth and eleventh beta-sheet, respectively.
Armillaria
;
classification
;
enzymology
;
genetics
;
Directed Molecular Evolution
;
Enzyme Stability
;
Escherichia coli
;
enzymology
;
genetics
;
Hot Temperature
;
Mutant Proteins
;
genetics
;
metabolism
;
Point Mutation
;
Polymerase Chain Reaction
;
methods
;
Protein Engineering
;
Recombinant Proteins
;
genetics
;
metabolism
;
Saccharomyces cerevisiae
;
enzymology
;
genetics
;
beta-Mannosidase
;
chemistry
;
genetics
;
metabolism
5.Cloning, expression and characterization of mannanase from Armillariella tabescens EJLY2098 in Pichia pastoris.
Yanfeng WANG ; AdaHangHeng WONG ; Xiaokui HUANG ; Daling LIU ; Dongsheng YAO
Chinese Journal of Biotechnology 2009;25(6):920-926
We used reverse transcriptase polymerase chain reaction (RT-PCR) and rapid amplification of cDNA end (RACE) techniques to obtain the full-length cDNA of beta-mannanase (EC 3.2.1.78) from Armillariella tabescens EJLY2098 (an edible fungus). Sequence analysis of the 1481 bp full-length cDNA encoding 445 amino acid residues indicated that the gene contained two structural domains, cellulose-binding domains (CBD) and glycoside hydrolase family 5 (GHF5) domains, other than the conserved beta-mannanase domain. Thus, we classified this gene as a member of glycoside hydrolase family 5. Next, we cloned a 1308 bp fragment encoding the beta-mannanase mature peptide (re-atMAN47) into the expression vector pPICZalphaA and expressed it in Pichia pastoris. The yield was 440 mg/L. Enzyme activity reached a maximum of 1.067 IU/mL after 72 h of methanol induction. The re-atMAN47 had an optimal temperature of 60 degrees C and an optimal pH of 5.5. It manifested broad thermostability from 30 degrees C-65 degrees C, and was stable between pH 4.5-7.0. This study represents the first record of a beta-mannanase from Armillariella tabescens EJLY2098 and provides a new source of carbohydrate hydrolysis enzyme with good biosafety, thermostability and wide pH stability. It is a good approach for the industrial needs of feed, food and pharmaceutical manufacturers.
Armillaria
;
classification
;
enzymology
;
genetics
;
Cloning, Molecular
;
Enzyme Stability
;
Pichia
;
genetics
;
metabolism
;
Recombinant Proteins
;
biosynthesis
;
genetics
;
Sequence Analysis, DNA
;
beta-Mannosidase
;
biosynthesis
;
chemistry
;
genetics
6.Study on release mechanism of berberine hydrochloride-loaded carboxymethyl konjac glucomannan pellets for colonic delivery.
Yu ZHANG ; Chun-Sheng LING ; Shi-Xiang HOU
China Journal of Chinese Materia Medica 2008;33(1):23-26
OBJECTIVETo study release mechanism of berberine hydrochloride (BH) from carboxymethyl konjac glucomannan pellets for colonic delivery.
METHODThe pellets were prepared by ionotropic gelation technique. The effects of the kinds of enzyme and enzyme concentration of dissolution media on the release of BH and the erosion properties of the pellets were studied.
RESULTCompared with the dissolution media without enzymes, the release of BH and the erosion of the pellets were increased obviously in the media with rat cecal and colonic content or beta-mannase, the degradation of the carrier material of pellets by enzymes was the main factor which result in the erosion of the pellets. With the increased of beta-mannase concentration, the release of BH and the erosion of the pellets increased, the amount relationships of the release of BH and the erosion of the pellets were approximately 1:1. The release of BH exhibit Peppas equation, the n value was more than 1.
CONCLUSIONThe release mechanism of BH from the pellets was enzymatic erosion-controlled, which indicates the potential of the pellets to serve as a colon-specific drug delivery system.
Animals ; Berberine ; administration & dosage ; pharmacokinetics ; Biological Transport ; drug effects ; Colon ; metabolism ; Drug Delivery Systems ; methods ; Mannans ; chemistry ; Rats ; Rats, Sprague-Dawley ; beta-Mannosidase ; pharmacology
7.Study on in vitro colon-specific enzymatic degradation performance of carboxymethyl konjac glucomannan.
Yu ZHANG ; Ya-Ling WU ; Shi-Xiang HOU
China Journal of Chinese Materia Medica 2007;32(22):2360-2363
OBJECTIVEIn vitro enzymatic degradation of carboxymethy konjac glucomannan (CMKGM) were studied to evaluate the feasibility of CMKGM used as carrier materials to prepare colon-specific drug delivery systems.
METHODThe solutions with rat gastrointestinal tract (GIT) contents or with commercial enzymes were chosen to stimulate in vivo GIT environment, respectively. Enzymatic degradation of CMKGM were studied by viscometic procedure. Degradation kinetics of CMKGM and konjac glucomannan (KGM) by enzymes, the effects of the degree of substitution (DS) of CMKGM and the pH of solution on its susceptibility to degradation were investigated.
RESULTCMKGM were degraded mainly in the simulated cecal and colonic media, but not in the simulated gastric and enteric media. Degradation of KGM and CMKGM by enzymes obeyed Michaelis-Menton kinetics. CMKGM with lower DS were more susceptible substrates. CMKGM were more susceptible substrates in solution with pH 6. 0-6. 8.
CONCLUSIONCMKGM had colon-specific enzymatic degradation characteristics and could be used as carrier materials to prepare colon-specific drug delivery systems.
Amorphophallus ; chemistry ; Animals ; Cecum ; enzymology ; Colon ; enzymology ; Drug Carriers ; chemistry ; Drug Delivery Systems ; Hydrogen-Ion Concentration ; Kinetics ; Mannans ; chemistry ; isolation & purification ; metabolism ; Plants, Medicinal ; chemistry ; Rats ; Rats, Sprague-Dawley ; beta-Mannosidase ; metabolism
8.Effects of human alpha-mannosidase Man2c1 transgene on growth and metastasis of transplanted tumor in mice.
Dong-dong JIANG ; Yu-qin LIU ; Bei GU ; Zhi-guang XIANG ; Yun TIAN ; Yi-qun ZHOU ; Ji-yu JU ; Yin LIU ; Lian-feng ZHANG ; Li-ping ZHU
Acta Academiae Medicinae Sinicae 2007;29(4):528-532
OBJECTIVETo study the effect of human alpha-mannosidase Man2c1 transgene on tumor growth and metastasis in mice.
METHODSHepatoma cell H22 or squamous epithelial carcinoma cell S180 was subcutaneously inoculated into the right armpit of mice (wild type mice and 28#, 35#, and 54# transgenic mice). Tumor size was measured every week. Mice were sacrificed on day 9 or 10 and then the tumors were exercised and weighted. Tumors and lungs were fixed in formaldehyde and sectioned. The sections were stained with hematoxylin/eosin and examined under microscope. The red blood cells in spleen were destroyed by Tris-NH4Cl. Natural killer (NK) cell activity was detected with Yac-1 cell as target.
RESULTSH22 and S180 tumors grew faster in all the three transgenic mice (28#, 35#, and 54#) than in wild type mice. The average size and weight of tumors between the transgenic mice and wild type mice were significantly different (P<0.05). Most tumors in the transgenic mice invaded the surrounding tissues. In contrast, nearly all the tumors in wild type mice were capsulized. Three of 10 28# transgenic mice, 5 of 10 35# transgenic mice, 3 of 10 54# transgenic mice, and 1 of 10 wild type mice showed lung metastasis of H22 tumor. Two of 6 28# transgenic mice, 3 of 6 35# transgenic mice, 1 of 6 54# transgenic mice, and 0 of 6 wild type mice showed lung metastasis of S180 tumor. No difference of NK activity in spleen cells was observed between the transgenic mice and wild type mice.
CONCLUSIONShMan2c1 transgene promotes growth, invasion, and metastasis of transplanted H22 and S180 tumors in mice. hMan2cl transgene does not affect NK activity in splenocytes.
Animals ; Cell Line, Tumor ; Humans ; Killer Cells, Natural ; immunology ; Lung Neoplasms ; secondary ; Mannosidases ; genetics ; Mice ; Mice, Transgenic ; Neoplasm Invasiveness ; Neoplasm Transplantation ; Neoplasms, Experimental ; immunology ; metabolism ; pathology ; Spleen ; immunology ; Transgenes
9.The Enzymatic Approach of Zygomycosis - Causing Mucorales.
Hee Sun KO ; Hideaki TAGUCHI ; Kayoko TAKIZAWA ; Kazutaka FUKUSIMA ; Hyun Soo KIM
Korean Journal of Medical Mycology 2007;12(1):9-17
Various oxidases and hydrolytic enzymes were analyzed to investigate the relationship between these enzymes and the skin pathogenicity of 18 Mucorales strains. Each strain was cultured in a nutrient medium containing starch as a carbon source. The cells grew quickly and were at a good state of growth after incubation for three days. Oxidase activity was not detected in any strain, whereas Mucor spp. including Mucor racemosus IFM47053 typically had high alcohol dehydrogenase (ADH) activity and all the strains had catalase activity. The culture filtrate and the cell free extract of each strain were applied to APIZYM test system, which revealed that all the strains examined produced many hydrolytic enzymes both inside and outside their mycelia. In the case of Absidia corymbifera strains, lipase activity was comparatively high, and polysaccharide hydrolytic enzymes such as alpha-glucosidase, beta-glucosidase, N-acetyl-beta-glucosaminidase, alpha-mannosidase, and alpha-fucosidase were produced.
Absidia
;
Alcohol Dehydrogenase
;
alpha-Glucosidases
;
alpha-L-Fucosidase
;
alpha-Mannosidase
;
beta-Glucosidase
;
Carbon
;
Catalase
;
Hydrolases
;
Lipase
;
Mucor
;
Mucorales*
;
Oxidoreductases
;
Skin
;
Starch
;
Virulence
;
Zygomycosis*
10.Differential gene expression in nasopharyngeal carcinoma cell with reduced and normal expression of 6A8 alpha-mannosidase.
Shuang-ling CHEN ; Yan SHI ; Yu-lan JIN ; Yin LIU ; Fang-tao ZHAO ; Li-ping ZHU
Acta Academiae Medicinae Sinicae 2005;27(3):305-310
OBJECTIVETo detect the differential display of mRNA expression between human nasopharyngeal carcinoma cell CNE-2L2 with reduced malignancy caused by transduction of a DNA antisense to 6A8 alpha-mannosidase cDNA (AS cell) and the wild type cell (W cell).
METHODSDifferential display of mRNA expression was analyzed using DNA microarray analysis. The datasets were confirmed by Northern blotting and RT-PCR.
RESULTSOut of the 1069 genes analyzed, 34 genes were up-regulated in AS cells relative to W cells. Conversely, 42 genes were down-regulated. The genes, up-regulation of which might have suppressive effect on tumor malignant behaviors, were P130 mRNA for 130K protein, TGF-betaIIR alpha, GABBR1, TGFBR1, TNFAIP1, STANIN, E-CADHERIN, CTNNA1 and 2, RFX2, TMPO, etc. The genes, down-regulation of which might have suppressive effect on tumor malignant behaviors, were CD44, NDRG1, TGFB1, RPS5, LEGUMAIIN, CBS, CD59, SNRPA1, etc. The microarray datasets were confirmed by Northern blot and RT-PCR analysis.
CONCLUSIONSIn comparison to the W cell, AS cell has up-regulation of 34 genes and down-regulation of 42 genes. Changes of the gene expression may play a role in the malignancy reduction of AS cell.
Gene Expression Profiling ; Humans ; Nasopharyngeal Neoplasms ; enzymology ; genetics ; Oligonucleotide Array Sequence Analysis ; Tumor Cells, Cultured ; alpha-Mannosidase ; biosynthesis ; genetics


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