1.Screening of proliferation related lncRNAs in leukemia cell lines by lentivirus shRNA library combined with second-generation sequencing.
Qiuyi MA ; Deyang SHI ; Bichen WANG ; Mutian CAO ; Haoyuan LI ; Weiping YUAN ; Yajing CHU
Chinese Journal of Biotechnology 2022;38(9):3406-3418
Long non-coding RNA (lncRNA) has become an important regulator of many cellular processes, including cell proliferation. Although studies have shown that a variety of lncRNAs play an important role in the occurrence and development of hematopoietic malignancies, a more comprehensive and unbiased method to study the function of lncRNAs in leukemia cell lines is lacking. Here, we used short hairpin RNA (shRNA) library combined with high-throughput sequencing to screen lncRNAs that may affect the proliferation of leukemia cell lines, and identified lncRNA C20orf204-203 among 74 candidate lncRNAs in this study. Further experiments showed that C20orf204-203 was localized in the cytoplasm in both K562 and THP-1 cell lines. C20orf204-203 knockdown decreased the proliferation of K562 and THP-1 cell lines accompanied with the increased proportion of early apoptotic cells. We observed the increased mRNA level of BAD gene while decreased protein level of TP53 and BCL2. The expression of Caspase 3 decreased and Caspase 3-cleaved protein increased in THP-1 cell line. However, their changes were inconsistent in the two cell lines. Our experimental results showed that knockdown of lncRNA C20orf204-203 in leukemia cell lines affected cell proliferation although the mechanism of action in different cell lines may differ. Importantly, our research demonstrated the feasibility of using shRNA library combined with high-throughput sequencing to study the role of lncRNA in leukemia cell lines on a large scale.
Caspase 3
;
Cell Line, Tumor
;
Cell Proliferation/genetics*
;
Humans
;
Lentivirus/genetics*
;
Leukemia/genetics*
;
Proto-Oncogene Proteins c-bcl-2
;
RNA, Long Noncoding/metabolism*
;
RNA, Messenger
;
RNA, Small Interfering/genetics*
2.Effect of miR-204 targeted regulation of DVL3 gene in silica-induced mouse lung epithelial cells.
Xin WANG ; Qiang ZENG ; Pei LI ; Ya GAO ; He Ren LOU
Chinese Journal of Industrial Hygiene and Occupational Diseases 2022;40(5):328-332
Objective: To construct a recombinant lentiviral vector for mouse miR-204 overexpression, and to verify the targeted regulation of miR-204 and DVL3 in silica (SiO(2)) -induced mouse lung epithelial cells (MLE-12 cells) . Methods: In October 2019, the pre-miR-204 gene was amplified from the mouse genome by the polymerase chain reaction (PCR) method. After sequencing, the amplified product was cloned into the pLenti-CMV-EGFP lentiviral vector. The positive clones were identified by PCR screening and sequencing. The miR-204 overexpressed lentiviral vector was transfected into 293T cells, and lentiviral packaging and titer determination were performed. The experiment was divided into SiO(2) control group, virus control group, and miR-204 virus group, and the expressions of miR-204 and DVL3 gene were detected by real-time PCR. Results: The miR-204 lentiviral expression vector Lv-miR-204-5p was constructed and identified correctly by PCR and sequencing, and a virus dilution with a titer of 9.57×10(8) IU/ml was obtained. The results of real-time PCR showed that the expression of miR-204 in MLE-12 cells of the miR-204 virus group was higher than that of SiO(2) control group and virus control group, and the expression of DVL3 gene was lower than that of SiO(2) control group and virus control group, the differences were statistically significant (P<0.05) . Conclusion: Overexpression of miR-204 by lentiviral vector may inhibit the expression of DVL3 gene in silica-induced mouse lung epithelial cells.
Animals
;
Epithelial Cells
;
Genetic Vectors
;
Lentivirus/metabolism*
;
Lung
;
Mice
;
MicroRNAs/metabolism*
;
Silicon Dioxide/toxicity*
;
Transfection
3.Construction of a novel lentiviral vector knocking down PD-1 via microRNA and its application in CAR-T cells.
Hui CHEN ; Xi JIN ; Xiaoman ZHANG ; Jimin GAO
Chinese Journal of Biotechnology 2020;36(7):1395-1404
By inserting microRNAs into the intron of EF1α promoter, we constructed a novel lentiviral vector knocking down PD-1 gene via microRNA and applied it to CAR-T cells. Lentiviral transduction efficiency and PD-1-silencing efficiency were detected by flow cytometry. PD-1 expression was detected by Western blotting. Relative expression of microRNA was measured by Q-PCR. Cytotoxicity of CAR-T cells based on this vector was tested by luciferase bioluminescence and flow cytometry. Compared with lentiviral vector with microRNA transcribed by U6 promotor, the transduction efficiency of lentiviral vector with microRNA which was inserted into the intron of EF1α promoter was more significant, and the knockdown rate of PD-1 was more than 90%, which was validated by flow cytometry and Western blotting. And the relative expression level of microRNA in Jurkat cells transduced with this novel lentiviral vector was shown by Q-PCR. Compared with normal CAR-T cells, CAR-T cells based on this vector showed stronger cytotoxicity against PD-L1 positive Raji cells. We successfully constructed a novel lentiviral vector that knocked down PD-1 via microRNA and verified the superiority of its transduction efficiency and knockdown efficiency of PD-1. CAR-T cells based on this vector can exert a more powerful cytotoxicity, thus providing theoretical support for the subsequent treatment of PD-L1 positive tumors.
Cell Line, Tumor
;
Gene Knockdown Techniques
;
Genetic Vectors
;
genetics
;
Humans
;
Lentivirus
;
genetics
;
MicroRNAs
;
metabolism
;
Programmed Cell Death 1 Receptor
;
Promoter Regions, Genetic
;
genetics
4.Construction and function of Glypican-3-targeted fourth-generation chimeric antigen receptor T cells (secreting IL-7 and CCL19).
Wanli HUANG ; Yu LIU ; Yaodi HU ; Jimin GAO
Chinese Journal of Biotechnology 2020;36(5):979-991
Adoptive immunotherapy based on chimeric antigen receptor-modified T cells (CAR-T) is one of the most promising strategies to treat malignant tumors, but its application in solid tumors is still limited. Glypican-3 (GPC3) is a meaningful diagnostic, therapeutic, and prognostic biomarker for hepatocellular carcinoma (HCC). The second/third generation GPC3-targeted CAR-T cells are generated to treat HCC. In order to improve the therapeutic effect, we constructed a fourth-generation lentiviral vector to express GPC3 CAR, human interleukin-7 (IL-7) and CCL19. Then the lentiviral vector and packaging plasmids were co-transfected into HEK293T cells to generate CAR lentiviral particles. Human T lymphocyte cells were transduced with CAR lentiviral to develop the fourth-generation GPC3-targeted CAR-T cells (GPC3-BBZ-7×19). In vitro, we used cell counting, transwell assay, luciferase bioluminescence assay and flow cytometry to compare the proliferation, chemotaxis, cytotoxicity and subtype distribution between GPC3-BBZ-7×19 CAR-T cells and the second generation GPC3-targeted CAR-T cells (GPC3-BBZ). In vivo, we established GPC3-positive HCC xenograft model in immunodeficient mice, then untransduced T cells (non-CAR-T) or GPC3-BBZ-7×19 CAR-T cells were injected. Tumor growth in mice was observed by bioluminescence imaging. Results showed that compared with GPC3-BBZ CAR-T, GPC3-BBZ-7×19 CAR-T cells had stronger proliferation, chemotactic ability, and higher composition of memory stem T cells (Tscm) (P values<0.05). However, there were no significant difference in cytotoxicity and cytokine secretion between them. In addition, GPC3-BBZ-7×19 CAR-T cells could significantly eliminate GPC3-positive HCC xenografts established in immunodeficient mice. Therefore, the fourth-generation GPC3-targeted CAR-T cells (secreting IL-7 and CCL19) are expected to be more durable and effective against HCC and produce tumor-specific memory, to provide a preclinical research basis for future clinical trials.
Animals
;
Carcinoma, Hepatocellular
;
Cell Line, Tumor
;
Chemokine CCL19
;
metabolism
;
Glypicans
;
metabolism
;
HEK293 Cells
;
Humans
;
Interleukin-7
;
metabolism
;
Lentivirus
;
genetics
;
Liver Neoplasms
;
Mice
;
Receptors, Chimeric Antigen
;
metabolism
;
T-Lymphocytes
;
metabolism
;
Xenograft Model Antitumor Assays
5.NANOG Alleviates the Damage of Human Hair Follicle Mesenchymal Stem Cells Caused by H2O2 through Activation of AKT Pathway.
Jia Hong SHI ; Kui Yang ZUO ; Ying Yao ZHANG ; Bo WANG ; Xing HAN ; Ao Bo LIAN ; Jin Yu LIU
Biomedical and Environmental Sciences 2019;32(4):272-280
OBJECTIVE:
To explore the protective effect of NANOG against hydrogen peroxide (H2O2) -induced cell damage in the human hair follicle mesenchymal stem cells (hHF-MSCs).
METHODS:
NANOG was expressed from a lentiviral vector, pLVX-IRES-ZsGreen. NANOG hHF-MSCs and vector hHF-MSCs were treated with 400 μmol/L hydrogen peroxide (H2O2) for 2 h, the cell survival rate, cell morphology, ROS production, apoptosis and expression of AKT, ERK, and p21 were determined and compared.
RESULTS:
Our results showed that NANOG could activate AKT and upregulate the expression of p-AKT, but not p-ERK. When treated with 400 μmol/L H2O2, NANOG hHF-MSCs showed higher cell survival rate, lower ROS production and apoptosis, higher expression of p-AKT, higher ratio of p-AKT/AKT.
CONCLUSION
Our results suggest that NANOG could protect hHF-MSCs against cell damage caused by H2O2 through activating AKT signaling pathway.
Cell Survival
;
Drug Evaluation, Preclinical
;
Hair Follicle
;
cytology
;
Humans
;
Hydrogen Peroxide
;
Lentivirus
;
Mesenchymal Stem Cells
;
drug effects
;
metabolism
;
Nanog Homeobox Protein
;
metabolism
;
pharmacology
;
Oxidative Stress
;
drug effects
;
Phosphatidylinositol 3-Kinases
;
metabolism
;
Proto-Oncogene Proteins c-akt
;
metabolism
;
Signal Transduction
6.Silencing Calreticulin Expression Inhibits Invasion Ability of SNK6 Cells in Vitro via Down-Regulating Expression of VEGF and MMP2/9.
Yan ZHENG ; Xiong-Peng ZHU ; Chun-Tuan LI ; Yuan-Ling HUANG
Journal of Experimental Hematology 2019;27(2):433-438
OBJECTIVE:
To investigate the effect of steadily down-regulating the expression of calreticulin (CALR) on the invasion of natural killer/T-cell lymphoma SNK6 cells, and explore its possible mechanism.
METHODS:
The sequences of specific short hairpin RNA (shRNA) targeting on human CALR were designed, and were inserted into pLKO.1-puro lentivirus vector, and the reconbinant lentivirus vector was obtained; the lentivirus particles were backed by three-plasmid system and transfected into SNK6 cells, the SNK6 cells stably down-regulating the CALR expression were sercened by puromytain, the CALR-silencing effect was verified by real-time PCR and Western blot. CCK-8 assay was used to evaluate the cell viability, The transwell invasion assays was used to analyse invasion of SNK6 cells. The mRNA expression of Calreticulin, MMP2, MMP9 and VEGF was determined by real time PCR, the protein expression of Calreticulin and GAPDH was analyzed by Western blot.
RESULTS:
The recombinant lentiviral vector pLKO.1-puro-shCALR was successfully constructed, packed into the lentivirus, then the SNK6 cells stably down-regulating Calreticulin expression was obtained. When Calreticulin was down-rengulated in SNK6 cells, the proliferation rate was reduced and the invasion ability was decreased; the mRNA levels of VEGF and MMP-2/9 also were reduced.
CONCLUSION
The stable down-regnlation of CALR expression in SNK6 cells can attenuate the imvasiveness of SNK6 cells, which maybe related with transcriptional decrease of MMP2, MMP9 and VEGF.
Calreticulin
;
genetics
;
metabolism
;
Cell Line, Tumor
;
Cell Proliferation
;
Down-Regulation
;
Genetic Vectors
;
Humans
;
Lentivirus
;
Matrix Metalloproteinase 2
;
Matrix Metalloproteinase 9
;
RNA Interference
;
RNA, Small Interfering
;
Transfection
;
Vascular Endothelial Growth Factor A
7.Effect of Silencing and Overexpression of LNK Gene on STAT3 Expression in THP-1 Cells.
Run-Mei TIAN ; Liang SHI ; Ying RONG ; Mei TAN ; Xi LUO ; Qiong SU ; Cheng-Shuang HUANG ; Yan CHEN
Journal of Experimental Hematology 2019;27(5):1469-1475
OBJECTIVE:
To investigate the effect of LNK gene silencing and overexpression on the expression of STAT3 gene in human monocytic leukemia cells (THP-1).
METHODS:
THP-1 cells were cultured, and the lentivirus was used as a vector to silence and overexpres the LNK gene stably. After transfection for 72 hours, the GFP expression levels were observed by inverted fluorescence microscopy. The lentiviral transfection efficiencies were detected by flow cytometry. The effects of LNK silencing and overexpression were confirmed, and the expression of STAT3 mRNA was detected by RT-PCR. The protein levels of LNK and STAT3 were detected by Western blotting.
RESULTS:
The GFP expression level of THP-1 cells reached more than 85% after transfection with lentivirus for 72 hours, and the transfection efficiency of cells was above 99%. mRNA expressions levels of LNK and STAT3 in LNK silencing group were signifycantly lower than those in control group, while LNK and STAT3 mRNA levels in the LNK overexpression group was significantly higher than those in control group (P<0.05). The protein expression levels of LNK and STAT3 in LNK silencing group were significantly lower than those in control group, while that in LNK overexpression group was significantly higher than that in control group (P<0.05).
CONCLUSION
The THP-1 cell line with LNK gene silencing and overexpression has been successfully established. The LNK gene silencing resulted in decrease of STAT3 expression; LNK gene overexpression and leads to inereases of STAT3 expression indicating that LNK participates in the regulation of STAT3.
Cell Line, Tumor
;
Gene Silencing
;
Genetic Vectors
;
Humans
;
Lentivirus
;
Proteins
;
RNA, Small Interfering
;
STAT3 Transcription Factor
;
metabolism
;
THP-1 Cells
;
Transfection
8.Direct modification of spermatogonial stem cells using lentivirus vectors in vivo leads to efficient generation of transgenic rats.
Bang-Jin KIM ; Yong-Hee KIM ; Myeong-Geun OH ; Ki-Jung KIM ; Sang-Eun JUNG ; Ju-Hee JIN ; Sun-Uk KIM ; Kwan-Sik MIN ; Buom-Yong RYU
Asian Journal of Andrology 2019;21(2):190-195
Spermatogonial stem cells (SSCs) transmit genetic information to the next progeny in males. Thus, SSCs are a potential target for germline modifications to generate transgenic animals. In this study, we report a technique for the generation of transgenic rats by in vivo manipulation of SSCs with a high success rate. SSCs in juvenile rats were transduced in vivo with high titers of lentivirus harboring enhanced green fluorescent protein and mated with wild-type females to create founder rats. These founder rats expressed the transgene and passed on the transgene with an overall success rate of 50.0%. Subsequent generations of progeny from the founder rats both expressed and passed on the transgene. Thus, direct modification of SSCs in juvenile rats is an effective means of generating transgenic rats through the male germline. This technology could be adapted to larger animals, in which existing methods for gene modification are inadequate or inapplicable, resulting in the generation of transgenic animals in a variety of species.
Animals
;
Green Fluorescent Proteins
;
Lentivirus
;
Male
;
Rats
;
Rats, Transgenic
;
Spermatogonia/metabolism*
9.Lentiviral vectors carrying siRNA inhibit S1PR3 gene expression in the corpus cavernosum smooth muscle cells of rats with spontaneous hypertension.
Bang-Cai WU ; Ji-Yi XIA ; Rui JIANG ; Hai-Fan YANG
National Journal of Andrology 2017;23(2):110-119
Objective:
To screen lentiviral vectors carrying siRNA which can specifically down-regulate the gene expression of the sphingosine-1-phosphate receptor 3 (S1PR3) in the corpus cavernosum smooth muscle (CCSM) cells of rats with spontaneous hypertension (SHT) and investigate the influence of the vectors on the signaling pathways of ROCK1, ROCK2 and eNOS in the CCSM cells of SHT rats.
METHODS:
Using the S1PR3 mRNA sequence of the rat as an interfering target, we designed and synthesized three pairs of siRNA sequences (siRNA1, 2 and 3) targeting S1PR3 and one pair of negative control, and then constructed and packaged them into lentiviral vectors. We cultured the CCSM cells of SHT and Wistar-Kyoto (WKY) rats in vitro and randomly divided them into groups A (SHT untransfected control), B (SHT transfected and carrying negative control virus), C (SHT transfected and carrying siRNA1 targeting S1PR3), D (SHT transfected and carrying siRNA2 targeting S1PR3), E (SHT transfected and carrying siRNA3 targeting S1PR3), and F (WKY untransfected control). With the multiplicity of infection (MOI) = 60, we transfected the CCSM cells of the SHT rats with the lentiviral vector and then determined the expression of the green fluorescent protein (GFP) as well as the mRNA and protein expressions of S1PR3, ROCK1, ROCK2 and eNOS in the CCSM cells of the SHT and WKY rats by RT-PCR and Western blot.
RESULTS:
Gene sequencing proved the successful construction of the lentiviral vector. The transfection efficiency of the CCSM cells of the rats was >80% in groups B, C, D and E. Compared with group A, the mRNA and protein expressions of S1PR3, ROCK1 and ROCK2 exhibited no significant difference in group B but were remarkably decreased in groups C, D, E and F (P< 0.05), most significantly in group E, with the inhibition rates of the mRNA and protein expressions of S1PR3 of (34.2±2.9) and (77.7±4.7)%, those of ROCK1 of (33.3±1.4) and (51.1±7.3)%, and those of ROCK2 of (30.8±3.6) and (58.32±5.5)%, respectively. The mRNA and protein expressions of eNOS in group A showed no significant difference from those in groups B, C, D and E (P>0.05) but remarkably lower than those in group F (P< 0.05). Compared with group F, the mRNA and protein expressions of S1PR3, ROCK1 and ROCK2 were not significantly different from those in group E (P>0.05) but markedly increased in groups A, B, C and D (P< 0.05), while those of eNOS remarkably decreased in groups A, B, C, D and E (P< 0.05).
CONCLUSIONS
The three constructed lentiviral vectors carrying siRNA targeting different loci of the S1PR3 gene could significantly inhibit the expression of S1P3 as well as RhoA/Rho kinase signaling pathways in the CCSM cells of SHT rats, and the vector carrying siRNA3 exhibited the highest inhibitory effect.
Animals
;
Down-Regulation
;
Gene Expression
;
Genetic Vectors
;
Green Fluorescent Proteins
;
metabolism
;
Lentivirus
;
genetics
;
Male
;
Myocytes, Smooth Muscle
;
metabolism
;
Nitric Oxide Synthase Type III
;
metabolism
;
Penis
;
metabolism
;
RNA, Messenger
;
RNA, Small Interfering
;
genetics
;
metabolism
;
Random Allocation
;
Rats
;
Rats, Inbred WKY
;
Receptors, Lysosphingolipid
;
genetics
;
metabolism
;
Signal Transduction
;
Sphingosine-1-Phosphate Receptors
;
Transfection
;
rho-Associated Kinases
;
metabolism
10.Effect of silencing the VDR gene on the migration and invasion of prostate cancer cells.
Yuan-Dong ZHANG ; Hui ZHAO ; Kang-Jian LI ; Run-Yun GUAN
National Journal of Andrology 2017;23(11):969-974
Objective:
To investigate the effect of small interfering RNA silencing the vitamin D receptor (VDR) on the biological behavior of prostate cancer PC-3 cells.
METHODS:
We constructed the VDR-shRNA lentiviral vector and determined the mRNA and protein expressions of VDR by RT-PCR and Western blot. Using scratch wound healing and Transwell chamber assays, we detected the changes in the migration and invasiveness of the PC-3 cells after silencing VDR.
RESULTS:
The VDR-shRNA plasmid significantly interfered the VDR expression and successfully screened the cell lines with stable VDR-shRNA interference. The rate of scratch wound healing was markedly lower in the VDR interference group than in the blank control and LV3 negative control groups (59% vs 73.6% and 77.8%, P <0.05), but with no statistically significant difference between the latter two (P >0.05), and so was the count of permeable cells (P <0.05), but with no significant difference between the latter two groups, either (P >0.05). The migration ability and invasiveness of the VDR-treated cells were remarkably decreased as compared with those of the control cells.
CONCLUSIONS
Down-regulated expression of the VDR gene may reduce the migration and invasiveness of prostate cancer cells.
Cell Line, Tumor
;
Cell Movement
;
genetics
;
Cell Proliferation
;
Down-Regulation
;
Gene Silencing
;
Humans
;
Lentivirus
;
Male
;
Neoplasm Invasiveness
;
genetics
;
Plasmids
;
Prostatic Neoplasms
;
genetics
;
pathology
;
RNA, Messenger
;
metabolism
;
RNA, Small Interfering
;
Receptors, Calcitriol
;
genetics
;
metabolism
;
Transfection
;
Wound Healing
;
genetics

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