2.Distribution of beta-Lactamase Genes Among Carbapenem-Resistant Klebsiella pneumoniae Strains Isolated From Patients in Turkey.
Meryem IRAZ ; Azer OZAD DUZGUN ; Cemal SANDALLI ; Mehmet Ziya DOYMAZ ; Yasemin AKKOYUNLU ; Aysegul SARAL ; Anton Y PELEG ; Osman Birol OZGUMUS ; Fatih Saban BERIS ; Hakan KARAOGLU ; Aysegul COPUR CICEK
Annals of Laboratory Medicine 2015;35(6):595-601
BACKGROUND: The emergence of carbapenem-resistant Klebsiella pneumoniae poses a serious problem to antibiotic management. We investigated the beta-lactamases in a group of carbapenem-resistant K. pneumoniae clinical isolates from Turkey. METHODS: Thirty-seven strains of K. pneumoniae isolated from various clinical specimens were analyzed by antimicrobial susceptibility testing, PCR for the detection of beta-lactamase genes, DNA sequencing, and repetitive extragenic palindronic (REP)-PCR analysis. RESULTS: All 37 isolates were resistant to ampicillin, ampicillin/sulbactam, piperacillin, piperacillin/tazobactam, ceftazidime, cefoperazone/sulbactam, cefepime, imipenem, and meropenem. The lowest resistance rates were observed for colistin (2.7%), tigecycline (11%), and amikacin (19%). According to PCR and sequencing results, 98% (36/37) of strains carried at least one carbapenemase gene, with 32 (86%) carrying OXA-48 and 7 (19%) carrying NDM-1. No other carbapenemase genes were identified. All strains carried a CTX-M-2-like beta-lactamase, and some carried SHV- (97%), TEM- (9%), and CTX-M-1-like (62%) beta-lactamases. Sequence analysis of bla(TEM) genes identified a bla(TEM-166) with an amino acid change at position 53 (Arg53Gly) from bla(TEM-1b), the first report of a mutation in this region. REP-PCR analysis revealed that there were seven different clonal groups, and temporo-spatial links were identified within these groups. CONCLUSIONS: Combinations of beta-lactamases were found in all strains, with the most common being OXA-48, SHV, TEM, and CTX-M-type (76% of strains). We have reported, for the first time, a high prevalence of the NDM-1 (19%) carbapenemase in carbapenem-resistant K. pneumoniae from Turkey. These enzymes often co-exist with other beta-lactamases, such as TEM, SHV, and CTX-M beta-lactamases.
Anti-Bacterial Agents/*pharmacology
;
Bacterial Proteins/*genetics/metabolism
;
Carbapenems/*pharmacology
;
DNA, Bacterial/chemistry/genetics/metabolism
;
Drug Resistance, Bacterial
;
Genotype
;
Humans
;
Klebsiella Infections/diagnosis/microbiology
;
Klebsiella pneumoniae/*drug effects/enzymology/isolation & purification
;
Microbial Sensitivity Tests
;
Polymerase Chain Reaction
;
Sequence Analysis, DNA
;
Turkey
;
beta-Lactamases/*genetics/metabolism
3.Clinical manifestations of pneumonia according to the causative organism in patients in the intensive care unit.
Jung Kyu LEE ; Jinwoo LEE ; Young Sik PARK ; Chang Hoon LEE ; Jae Joon YIM ; Chul Gyu YOO ; Young Whan KIM ; Sung Koo HAN ; Sang Min LEE
The Korean Journal of Internal Medicine 2015;30(6):829-836
BACKGROUND/AIMS: Whether the causative organism influences the clinical course of pneumonia in the intensive care unit (ICU) is controversial. We assessed the clinical manifestations and prognosis of pneumonia according to the causative pathogens in patients in a medical ICU. METHODS: A retrospective observational study was performed in a medical ICU. Among 242 patients who were admitted to the ICU, 103 who were treated for pneumonia were analyzed. RESULTS: The causative pathogen was identified in 50 patients (49.0%); 22 patients (21.6%) had multidrug-resistant (MDR) pathogens. The distribution of causative micro-organisms was Staphylococcus aureus (20%), Pseudomonas species (16%), Klebsiella pneumoniae (14%), and Acinetobacter baumannii (12%). No significant difference in ICU mortality rate, duration of ICU stay, duration of mechanical ventilation, or frequencies of re-intubation and tracheostomy were detected based on the identification of any pathogen. In sub-analyses according to the pneumonia classification, the number of pathogens identified did not differ between pneumonia types, and a higher incidence of identified MDR pathogens was detected in the hospital-acquired pneumonia group than in the community-acquired or healthcare- acquired pneumonia groups. However, the clinical outcomes of pneumonia according to identification status and type of pathogen did not differ significantly between the groups. CONCLUSIONS: Neither the causative micro-organism nor the existence of MDR pathogens in critically ill patients with pneumonia was associated with the clinical outcome of pneumonia, including ICU mortality. This result was consistent regardless of the pneumonia classification.
Acinetobacter Infections/diagnosis/*microbiology/mortality/therapy
;
Aged
;
Anti-Bacterial Agents/therapeutic use
;
Critical Illness
;
Drug Resistance, Multiple, Bacterial
;
Female
;
Hospital Mortality
;
Humans
;
Intensive Care Units
;
Klebsiella Infections/diagnosis/*microbiology/mortality/therapy
;
Length of Stay
;
Male
;
Middle Aged
;
Pneumonia, Bacterial/diagnosis/*microbiology/mortality/therapy
;
Proportional Hazards Models
;
Pseudomonas Infections/diagnosis/*microbiology/mortality/therapy
;
Respiration, Artificial
;
Retrospective Studies
;
Risk Factors
;
Staphylococcal Infections/diagnosis/*microbiology/mortality/therapy
;
Time Factors
;
Tracheostomy
;
Treatment Outcome
4.Use of Delta Neutrophil Index for Differentiating Low-Grade Community-Acquired Pneumonia From Upper Respiratory Infection.
Hyunjung KIM ; Yonggoo KIM ; Kwan Hyoung KIM ; Chang Dong YEO ; Jin Woo KIM ; Hae Kyung LEE
Annals of Laboratory Medicine 2015;35(6):647-650
No abstract available.
Acinetobacter baumannii/isolation & purification
;
Adult
;
Aged
;
Aged, 80 and over
;
Area Under Curve
;
C-Reactive Protein/analysis
;
Community-Acquired Infections/*diagnosis/microbiology/pathology
;
Female
;
Humans
;
Klebsiella pneumoniae/isolation & purification
;
Leukocyte Count
;
Male
;
Middle Aged
;
Neutrophils/*cytology
;
Pneumonia/*diagnosis/microbiology/pathology
;
ROC Curve
;
Respiratory Tract Infections/*diagnosis/microbiology/pathology
;
Severity of Illness Index
;
Staphylococcus aureus/isolation & purification
;
Streptococcus pneumoniae/isolation & purification
5.Changes in Causative Pathogens of Acute Cholangitis and Their Antimicrobial Susceptibility over a Period of 6 Years.
Jeong Seok KWON ; Jimin HAN ; Tae Won KIM ; Ji Hye OH ; Hyun Hee KWON ; Jin Tae JUNG ; Joong Goo KWON ; Eun Young KIM ; Ho Gak KIM
The Korean Journal of Gastroenterology 2014;63(5):299-307
BACKGROUND/AIMS: We evaluated changes of causative pathogen in acute cholangitis and their antimicrobial susceptibility over six years and differences between community-acquired and hospital-acquired acute cholangitis at our institution. METHODS: Medical records of 1,596 patients with acute cholangitis and biliary drainage between August 2006 and August 2012 were reviewed retrospectively. Cases were divided according to time: period 1 (August 2006-December 2008, n=645, 40.4%), period 2 (January 2009-August 2012, n=951, 59.6%). Cases were divided according to community-acquired cholangitis (n=1,397, 87.5%) and hospital-acquired cholangitis (n=199, 12.5%). Causative pathogens and antimicrobial susceptibility were investigated in each group. RESULTS: Causative pathogen was isolated from bile culture in 1,520 out of 1,596 cases (95.2%). The three most frequently isolated Gram-negative bacteria were extended-spectrum beta-lactamase (ESBL)-producing Escherichia coli (n=485, 30.4%), E. coli (n=237, 13.2%), and Citrobacter freundii (n=110, 6.9%). Between periods 1 and 2, prevalence of ESBL-producing E. coli and Klebsiella pneumoniae did not show significant change (36.7% vs. 32.1%, p=0.073; 6.6% vs. 6.2%, p=0.732). C. freundii showed a significant increase from period 1 to period 2 (1.7% vs. 13.2%, p=0.000). In both time periods, imipenem was the antimicrobial agent showing the highest rate of susceptibility (93.3% vs. 93.9%, p=0.783). Higher prevalence of ESBL-producing E. coli and C. freundii was observed in the hospital-acquired cholangitis group (52.1% vs. 31.2%, p=0.000; 15.9% vs. 7.3%, p=0.001). CONCLUSIONS: The most common causative pathogen of acute cholangitis was ESBL-producing E. coli. Prevalence of C. freundii increased over the time period. Imipenem should be reserved as an alternative for resistant pathogens.
Acute Disease
;
Aged
;
Aged, 80 and over
;
Anti-Bacterial Agents/*pharmacology
;
Cholangitis/diagnosis/*microbiology
;
*Citrobacter freundii/drug effects/isolation & purification
;
Community-Acquired Infections/microbiology
;
Cross Infection/microbiology
;
Drug Resistance, Bacterial
;
*Escherichia coli/drug effects/isolation & purification
;
Female
;
Humans
;
Imipenem/pharmacology
;
*Klebsiella pneumoniae/drug effects/isolation & purification
;
Male
;
Microbial Sensitivity Tests
;
Middle Aged
;
Retrospective Studies
;
Time Factors
;
beta-Lactamases/metabolism
6.Native valve endocarditis due to extended spectrum beta-lactamase producing Klebsiella pneumoniae.
Hyun Ae JUNG ; Young Eun HA ; Damin KIM ; Jihyun PARK ; Cheol In KANG ; Doo Ryeon CHUNG ; Seung Woo PARK ; Ki Ik SUNG ; Jae Hoon SONG ; Kyong Ran PECK
The Korean Journal of Internal Medicine 2014;29(3):398-401
No abstract available.
Aged
;
Anti-Bacterial Agents/therapeutic use
;
Aortic Valve/*microbiology/surgery/ultrasonography
;
Cross Infection/diagnosis/*microbiology/therapy
;
Diffusion Magnetic Resonance Imaging
;
Endocarditis, Bacterial/diagnosis/*microbiology/therapy
;
Heart Valve Prosthesis Implantation
;
Humans
;
Klebsiella Infections/diagnosis/*microbiology/therapy
;
Klebsiella pneumoniae/drug effects/*enzymology/pathogenicity
;
Male
;
Microbial Sensitivity Tests
;
Predictive Value of Tests
;
Sepsis/diagnosis/*microbiology/therapy
;
Treatment Outcome
;
beta-Lactamases/*metabolism
7.The First Case of Septicemia Caused by Imipenem-Susceptible, Meropenem-Resistant Klebsiella pneumoniae.
Shizuo KAYAMA ; Norifumi SHIGEMOTO ; Ryuichi KUWAHARA ; Takashi ISHINO ; Kentaro IMON ; Makoto ONODERA ; Michiya YOKOZAKI ; Hiroki OHGE ; Motoyuki SUGAI
Annals of Laboratory Medicine 2013;33(5):383-385
No abstract available.
Aged
;
Drug Resistance, Bacterial
;
Humans
;
Imipenem/pharmacology/therapeutic use
;
Klebsiella Infections/diagnosis/drug therapy/*microbiology
;
Klebsiella pneumoniae/drug effects/isolation & purification/*physiology
;
Male
;
Microbial Sensitivity Tests
;
Phenotype
;
Sepsis/diagnosis/drug therapy/*microbiology
;
Thienamycins/pharmacology/therapeutic use
8.Higher Prevalence of Klebsiella pneumoniae Extended-Spectrum beta-Lactamase in Patients on Renal Replacement Therapy.
Hyang Lim LEE ; Dong Hee WHANG ; Dong Won PARK ; Young Jin LEE ; Yeong Hoon KIM ; Ho Jun CHIN ; Suhnggown KIM ; Ho Seok KOO
Journal of Korean Medical Science 2013;28(8):1187-1193
The prevalence of antibiotic resistance is higher in patients undergoing renal replacement therapy (RRT) than in patients who did not undergo RRT. We investigated the presence of KP (Klebsiella pneumoniae) in patients who underwent RRT. All data were collected retrospectively by accessing patient medical records from 2004 to 2011 for the culture results of all patients who were positive for KP. We grouped the patients by the presence of extended-spectrum beta-lactamase (ESBL) into a KP ESBL(-) group (KP[-]) and a KP ESBL(+) group (KP[+]). In total, 292 patients (23.1%) were in the KP(+) group, and 974 patients (76.9%) were in the KP(-) group. A greater percentage of KP(+) was found in patients who underwent RRT (7.5%) than in patients who did not undergo RRT (3.2%) (OR, 2.479; 95% CI,1.412-4.352). A Cox's hazard proportional model analysis was performed, and for patients with pneumonia, the risk of KP(+) was 0.663 times higher in patients who had lower albumin levels, 2.796 times higher in patients who had an inserted Levin tube, and 4.551 times higher in patients who underwent RRT. In conclusion, RRT can be a risk factor for KP(+) in patients with pneumonia.
Adult
;
Aged
;
Aged, 80 and over
;
Female
;
Humans
;
Kaplan-Meier Estimate
;
Kidney Failure, Chronic/*microbiology/therapy
;
Klebsiella Infections/*epidemiology/microbiology/mortality
;
Klebsiella pneumoniae/*enzymology/isolation & purification
;
Male
;
Middle Aged
;
Odds Ratio
;
Pneumonia/diagnosis/*epidemiology/microbiology
;
Prevalence
;
Proportional Hazards Models
;
Renal Replacement Therapy
;
Retrospective Studies
;
Risk Factors
;
Serum Albumin/analysis
;
beta-Lactamases/*metabolism
9.A case of necrotizing pancreatitis subsequent to transcatheter arterial chemoembolization in a patient with hepatocellular carcinoma.
Song I BAE ; Jong Eun YEON ; Jong Mee LEE ; Ji Hoon KIM ; Hyun Jung LEE ; Sun Jae LEE ; Sang Jun SUH ; Eileen L YOON ; Hae Rim KIM ; Kwan Soo BYUN ; Tae Seok SEO
Clinical and Molecular Hepatology 2012;18(3):321-325
Necrotizing pancreatitis is one of the rare complications of transcatheter arterial chemoembolization (TACE). Necrotizing pancreatitis after TACE may result from the development of ischemia caused by regurgitation of embolic materials into the vessels supplying the pancreas. We report a case of post-TACE necrotizing pancreatitis with abscess formation in a patient with hepatocellular carcinoma. The patient had suffered hepatic artery injury due to repetitive TACE; during his 25th TACE procedure he had submitted to selective catheterization of the feeding vessel from the dorsal pancreatic artery with a cytotoxic agent and Gelfoam particles. The patient complained of abdominal pain after the TACE procedure, and a CT scan led to a diagnosis of necrotizing pancreatitis with abscess formation. The pancreatic abscess progressed despite general management of the pancreatitis, including antibiotics. Percutaneous catheter drainage was performed, and the symptoms of the patient improved.
Abscess/microbiology
;
Aged
;
Anti-Bacterial Agents/therapeutic use
;
Carcinoma, Hepatocellular/*complications/*therapy
;
Chemoembolization, Therapeutic/*adverse effects
;
Cholangiopancreatography, Endoscopic Retrograde
;
Citrobacter freundii/isolation & purification
;
Drainage
;
Drug Resistance, Multiple, Bacterial
;
Enterobacteriaceae Infections/drug therapy
;
Hepatitis B/complications
;
Humans
;
Klebsiella/isolation & purification
;
Klebsiella Infections/drug therapy
;
Liver Cirrhosis/etiology
;
Liver Neoplasms/*complications/*therapy
;
Male
;
Necrosis/*diagnosis/etiology
;
Pancreatitis/*diagnosis/etiology
;
Tomography, X-Ray Computed
10.Splenic Abscess: A Single Institution Study and Review of the Literature.
Won Suk LEE ; Sang Tae CHOI ; Keon Kuk KIM
Yonsei Medical Journal 2011;52(2):288-292
PURPOSE: The aim of this study was to review our experience with splenic abscesses, with respect to the relevant aspects of splenic abscesses and treatment outcomes. MATERIALS AND METHODS: We reviewed the cases of 18 patients who had splenic abscesses and who were treated at our hospital from November 1993 to December 2008. RESULTS: The most common symptom at presentation was abdominal pain in 12 patients (66.7%). The median duration from symptom onset until establishment of a diagnosis was 22 days. Streptococcus viridians was the most common pathogen (27.8%), follow by Klebsiella pneumoniae (22.2%). The mortality rate during the inpatient period and the previous 90 days was 16.6%. Three of four patients with Klebsiella pneumoniae showed a single abscess pocket. Four patients (22.2%) underwent percutaneous drainage, eight (44.5%) recieved antibiotic treatment only and six (33.3%) underwent splenectomy. CONCLUSION: There is no gold standard for treating splenic abscesses. Treatment should be customized for each patient.
Abscess/diagnosis/drug therapy/microbiology/surgery/*therapy
;
Adult
;
Aged
;
Anti-Bacterial Agents/therapeutic use
;
Drainage
;
Female
;
Humans
;
Klebsiella Infections/diagnosis/drug therapy/microbiology/surgery
;
Klebsiella pneumoniae
;
Male
;
Middle Aged
;
Splenectomy
;
Splenic Diseases/diagnosis/drug therapy/*microbiology/surgery
;
Streptococcal Infections/diagnosis/drug therapy/microbiology/surgery
;
Treatment Outcome
;
Viridans Streptococci
;
Young Adult

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