1.New nsp8 isoform suggests mechanism for tuning viral RNA synthesis.
Shuang LI ; Qi ZHAO ; Yinjie ZHANG ; Yang ZHANG ; Mark BARTLAM ; Xuemei LI ; Zihe RAO
Protein & Cell 2010;1(2):198-204
During severe acute respiratory syndrome coronavirus (SARS-CoV) infection, the activity of the replication/transcription complexes (RTC) quickly peaks at 6 hours post infection (h.p.i) and then diminishes significantly in the late post-infection stages. This "down-up-down" regulation of RNA synthesis distinguishes different viral stages: primary translation, genome replication, and finally viron assembly. Regarding the nsp8 as the primase in RNA synthesis, we confirmed that the proteolysis product of the primase (nsp8) contains the globular domain (nsp8C), and indentified the resectioning site that is notably conserved in all the three groups of coronavirus. We subsequently crystallized the complex of SARS-CoV nsp8C and nsp7, and the 3-D structure of this domain revealed its capability to interfuse into the hexadecamer super-complex. This specific proteolysis may indicate one possible mechanism by which coronaviruses to switch from viral infection to genome replication and viral assembly stages.
Amino Acid Sequence
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Crystallography, X-Ray
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DNA Primase
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chemistry
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genetics
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physiology
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Humans
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Isoenzymes
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chemistry
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genetics
;
physiology
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Molecular Sequence Data
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Protein Structure, Secondary
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RNA, Viral
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biosynthesis
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SARS Virus
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chemistry
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genetics
;
physiology
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Sequence Alignment
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Severe Acute Respiratory Syndrome
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virology
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Virus Replication
2.Preparation of the monoclonal antibody against SOX4 protein and detection of SOX4 expression level in different tumor cell lines.
Ming YU ; Rui MU ; Ming LÜ ; Ailing LI ; Ning GUO
Chinese Journal of Biotechnology 2009;25(2):257-262
In the present study, we constructed a prokaryotic expression vector containing SOX4 protein encoding sequences. The GST-SOX4 soluble protein was expressed in Escherichia coli DH5alpha and purified by glutathione sepharose-4B. The purified recombinant protein was used to immunize Balb/C mice and the monoclonal antibody against SOX4 was prepared by using hybridoma technique. The titer of the antibody was determined as 1 x 10(5) by indirect ELISA. The specificity of the antibody was verified by Western blotting analysis. The monoclonal antibody specifically recognized the overexpressed exogenous SOX4 protein as well as endogenous SOX4 protein. The expression level of SOX4 protein in different cell lines and mouse tissues was detected by using the antibody. Differential expression of the protein was demonstrated by Western blotting. The data indicated that the antibody was specific. The antibody can be used as an important tool for further exploration of the role of SOX4 in tumorigenesis.
Animals
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Antibodies, Monoclonal
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biosynthesis
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immunology
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Escherichia coli
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genetics
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metabolism
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Genetic Vectors
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Glutathione Transferase
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genetics
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metabolism
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Humans
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Isoenzymes
;
genetics
;
metabolism
;
Liver Neoplasms
;
metabolism
;
Lung Neoplasms
;
metabolism
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Mice
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Mice, Inbred BALB C
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RNA, Messenger
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genetics
;
metabolism
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Recombinant Fusion Proteins
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genetics
;
immunology
;
metabolism
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SOXC Transcription Factors
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genetics
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immunology
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metabolism
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Tumor Cells, Cultured
3.Secretion of adenylate kinase 1 is required for extracellular ATP synthesis in C2C12 myotubes.
Hyo Jung CHOO ; Bong Woo KIM ; Oh Bong KWON ; Chang Seok LEE ; Jong Soon CHOI ; Young Gyu KO
Experimental & Molecular Medicine 2008;40(2):220-228
Extracellular ATP (exATP) has been known to be a critical ligand regulating skeletal muscle differentiation and contractibility. ExATP synthesis was greatly increased with the high level of adenylate kinase 1 (AK1) and ATP synthase beta during C2C12 myogenesis. The exATP synthesis was abolished by the knock-down of AK1 but not by that of ATP synthase beta in C2C12 myotubes, suggesting that AK1 is required for exATP synthesis in myotubes. However, membrane-bound AK1beta was not involved in exATP synthesis because its expression level was decreased during myogenesis in spite of its localization in the lipid rafts that contain various kinds of receptors and mediate cell signal transduction, cell migration, and differentiation. Interestingly, cytoplasmic AK1 was secreted from C2C12 myotubes but not from C2C12 myoblasts. Taken together all these data, we can conclude that AK1 secretion is required for the exATP generation in myotubes.
Adenosine Triphosphate/*biosynthesis
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Adenylate Kinase/*metabolism
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Animals
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Cell Line
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Extracellular Space/metabolism
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Isoenzymes/*metabolism
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Mice
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Muscles/cytology/*metabolism
4.High output of a Trametes laccase in Pichia pastoris and characterization of recombinant enzymes.
Teng-Jiao CUI ; Xiao-Tang WANG ; Hong-Min ZHOU ; Yu-Zhi HONG ; Ya-Zhong XIAO ; Teng-Jiao CUI ; Xiao-Tang WANG ; Chun-Lei PU
Chinese Journal of Biotechnology 2007;23(6):1055-1059
A laccase gene (lacD) from the basidiomycete Trametes sp. 420 was heterologously expressed in Pichia pastoris in two ways, resulting in two recombinant enzymes of rLacDx with native N-terminus and rLacDe with eight additional amino acid residues at N-terminus. The yields of rLacDx and rLacDe in shaken-flask cultures after an 18-day growth were 1.21 x 10(5) u/L and 7.38 x 10(4) u/L, respectively, as determined with 2,2'-azinobis(3-ethylbenzothia-zoline- 6-sulfonic acid) (ABTS) as substrate. The yield of rLacDx was further increased to 2.39 x 10(5) u/L under high-density fermentation while the production process was decreased to 7.5 days. In addition, rLacDx and rLacDe exhibited similar enzymatic characters in oxidizing substrate guaiacol, and were stable at 50 degrees C and at a pH range from 3 to 10. However, the specific activity of rLacDx (1761 u/mg) for ABTS was higher than that of rLacDe (1122 u/mg), and the apparent Km value of rLacDx (427 microM) was less than that of rLacDe (604 microM).
Cloning, Molecular
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Fermentation
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Isoenzymes
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biosynthesis
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genetics
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Laccase
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biosynthesis
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genetics
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Pichia
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genetics
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metabolism
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Recombinant Proteins
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biosynthesis
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genetics
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isolation & purification
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Trametes
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enzymology
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genetics
5.The expression and cellular localization of phospholipase D isozymes in the developing mouse testis.
Seungjoon KIM ; Heechul KIM ; Yongduk LEE ; Jin Won HYUN ; Young Ho LEE ; Min Kyoung SHIN ; Do Sik MIN ; Taekyun SHIN
Journal of Veterinary Science 2007;8(3):209-212
To examine the involvement of phospholipase D (PLD)isozymes in postnatal testis development, the expression ofPLD1 and PLD2 was examined in the mouse testis atpostnatal weeks 1, 2, 4, and 8 using Western blot analysisand immunohistochemistry. The expression of both PLD1and PLD2 increased gradually with development frompostnatal week 1 to 8. Immunohistochemically, PLDimmunoreactivity was detected in some germ cells in thetestis and interstitial Leydig cells at postnatal week 1.PLD was mainly detected in the spermatocytes andresidual bodies of spermatids in the testis after 8 weeksafter birth. The intense immunostaining of PLD in Leydigcells remained unchanged by postnatal week 8. Thesefindings suggest that PLD isozymes are involved in thespermatogenesis of the mouse testis.
Animals
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Blotting, Western
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Female
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Immunohistochemistry
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Isoenzymes
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Male
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Mice
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Mice, Inbred BALB C
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Phospholipase D/biosynthesis/*metabolism
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Spermatogenesis/physiology
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Testis/*enzymology/growth & development
6.Pleckstrin homology domain of phospholipase C-gamma1 directly binds to 68-kDa neurofilament light chain.
Sung Kuk KIM ; Jang Hyun CHOI ; Pann Ghill SUH ; Jong Soo CHANG
Experimental & Molecular Medicine 2006;38(3):265-272
Phosphoinositide-specific phospholipase C-gamma1 (PLC-gamma1) has two pleckstrin homology (PH) domains: an amino-terminal domain (PH1) and a split PH domain (PH2). Here, we show that overlay assay of bovine brain tubulin pool with glutathione-S-transferase (GST)-PLC-gamma1 PH domain fusion proteins, followed by matrix-assisted laser-desorption ionization-time of flight mass spectrometry (MALDI-TOF MS), identified 68-kDa neurofilament light chain (NF-L) as a binding protein of amino-terminal PH domain of PLC-gamma1. NF-L is known as a component of neuronal intermediate filaments, which are responsible for supporting the structure of myelinated axons in neuron. PLC-gamma1 and NF-L colocalized in the neurite in PC12 cells upon nerve growth factor stimulation. In vitro binding assay and immunoprecipitation analysis also showed a specific interaction of both proteins in differentiated PC12 cells. The phosphatidylinositol 4, 5-bisphosphate [PI(4,5)P2] hydrolyzing activity of PLC-gamma1 was slightly decreased in the presence of purified NF-L in vitro, suggesting that NF-L inhibits PLC-gamma1. Our results suggest that PLC-gamma1-associated NF-L sequesters the phospholipid from the PH domain of PLC-gamma1.
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
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Rats
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Protein Interaction Mapping
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Protein Biosynthesis/drug effects
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Protein Binding/drug effects
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Phosphoproteins/chemistry/*metabolism
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Phospholipase C gamma/antagonists & inhibitors/chemistry/*metabolism
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Phosphatidylinositol 4,5-Diphosphate/metabolism
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Peptides/chemistry/metabolism
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PC12 Cells
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Neurofilament Proteins/chemistry/*metabolism
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Nerve Growth Factor/pharmacology
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Molecular Weight
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Molecular Sequence Data
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Microtubules/metabolism
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Microscopy, Fluorescence
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Isoenzymes/metabolism/pharmacology/physiology
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Glutathione Transferase/metabolism
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Blotting, Far-Western
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Blood Proteins/chemistry/*metabolism
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Binding Sites
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Animals
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Amino Acid Sequence
7.Purification of a new phospholipase A2 homologue from Agkistrodon blomhoffii siniticus and its effects on gene expression profile of Hep3B cells.
An-de MA ; Shao-yu WU ; Jia-jie ZHANG ; Zhi-qin LI ; Wei XU ; Xiao-yun WEN ; Le YU ; Shu-guang WU
Journal of Southern Medical University 2006;26(1):75-79
OBJECTIVETo isolate and purify a new phospholipase A2 (PLA2) homologue from Agkistrodon blomhoffii siniticus and investigate its effects on the gene expression profile of Hep3B cells.
METHODSThe PLA2 homologue was isolated and purified by reverse-phase high-performance liquid chromatography (HPLC) and its purity was determined also by HPLC. The relative molecular mass of the homologue was measured by electrospray ionization mass spectrum. The gene expression profile of Hep3B cells was detected with gene chip after exposure of the cells to 139 microg/ml PLA2 homologue for 12 h.
RESULTSThe purity of the PLA2 homologue was 97.2%, whose relative molecular mass was 13,900. After exposure of Hep3B cells to 139 microg/ml PLA2 homologue for 12 h, 19 genes were down-regulated and 20 up-regulated in the cells. The genes showing altered expressions in response to the exposure were mainly involved in cell cycle control and DNA damage repair, cell apoptosis and senescence, production of signal transduction molecules and transcription factors, cell adhesion, angiogenesis, and tumor invasion and metastasis.
CONCLUSIONSThe PLA2 homologue induces alterations in the expression of a wide variety of genes involved in the growth and metastasis of tumor cells. The results of this study provide clues for further study of the possible mechanism for the action of PLA2 homologue on Hep3B cells.
Agkistrodon ; Animals ; Carcinoma, Hepatocellular ; genetics ; Chromatography, High Pressure Liquid ; DNA Damage ; drug effects ; Gene Expression Profiling ; Gene Expression Regulation, Neoplastic ; drug effects ; Hyaluronan Receptors ; biosynthesis ; genetics ; Isoenzymes ; Liver Neoplasms ; genetics ; Phospholipases A ; isolation & purification ; pharmacology ; Phospholipases A2 ; Proto-Oncogene Proteins c-bcr ; biosynthesis ; genetics ; Snake Venoms ; enzymology ; Tumor Cells, Cultured
8.Cell type-specific upregulation of myristoylated alanine-rich C kinase substrate and protein kinase C-alpha, -beta I, -beta II, and -delta in microglia following kainic acid-induced seizures.
Su Yong EUN ; Eun Hae KIM ; Kee Seok KANG ; Hwa Jung KIM ; Sangmee Ahn JO ; Soon Jong KIM ; Su Hyun JO ; Sang Jeong KIM ; Perry J BLACKSHEAR ; Jun KIM
Experimental & Molecular Medicine 2006;38(3):310-319
Myristoylated alanine-rich C kinase substrate (MARCKS) is a widely distributed protein kinase C (PKC) substrate and has been implicated in actin cytoskeletal rearrangement in response to extracellular stimuli. Although MARCKS was extensively examined in various cell culture systems, the physiological function of MARCKS in the central nervous system has not been clearly understood. We investigated alterations of cellular distribution and phosphorylation of MARCKS in the hippocampus following kainic acid (KA)-induced seizures. KA (25 mg/kg, i.p.) was administered to eight to nine week-old C57BL/6 mice. Behavioral seizure activity was observed for 2 h after the onset of seizures and was terminated with diazepam (8 mg/kg, i.p.). The animals were sacrificed and analyzed at various points in time after the initiation of seizure activity. Using double-labeling immunofluorescence analysis, we demonstrated that the expression and phosphorylation of MARCKS was dramatically upregulated specifically in microglial cells after KA-induced seizures, but not in other types of glial cells. PKC alpha, beta I, beta II and delta, from various PKC isoforms examined, also were markedly upregulated, specifically in microglial cells. Moreover, immunoreactivities of phosphorylated MARCKS were co-localized in the activated microglia with those of the above isoforms of PKC. Taken together, our in vivo data suggest that MARCKS is closely linked to microglial activation processes, which are important in pathological conditions, such as neuroinflammation and neurodegeneration.
Up-Regulation/drug effects
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Time Factors
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Seizures/chemically induced/*metabolism
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Protein Kinase C-delta/analysis
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Protein Kinase C-alpha/analysis
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Protein Kinase C/*analysis
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Protein Biosynthesis/drug effects
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Phosphorylation/drug effects
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Microscopy, Confocal
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Microglia/cytology/drug effects/*metabolism
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Mice, Inbred C57BL
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Mice
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Membrane Proteins/*analysis/metabolism
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Kainic Acid/*toxicity
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Isoenzymes/analysis
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Intracellular Signaling Peptides and Proteins/*analysis/metabolism
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Immunohistochemistry
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Animals
9.Reversal effect of haloperidol on doxorubicin resistance and chloride channel inhibition in erythroleukemic cell K562/Dox.
Chinese Journal of Oncology 2005;27(2):81-85
OBJECTIVETo investigate the reversal effect of haloperidol (Hal) on doxorubicin (Dox) resistance and its inhibition effect on P-glycoprotein and swelling-activated chloride channel in Dox-resistant erythro-leukemic cell line K562/Dox.
METHODSTumor cell proliferation was measured by LDH assay. mRNA expressions of P-glycoprotein (MDR1), glutathione S-transferase Pi (GSTpi) and MDR-associated protein (MRP) of K562/Dox treated with Hal were assayed by RT-PCR. Chloride-sensitive dye MQAE was loaded into K562/Dox cells and the intracellular fluorescence intensity was measured to evaluate the effect of Hal on chloride channel in swelling-activated K562/Dox cells. Coulter counter ZM and Channelyzer 256 were used to measure cell volume regulation.
RESULTSHal significantly reversed Dox resistance in K562/Dox cells after 12.50, 6.25 and 3.12 micromol/L Hal treatment, the chemosensitivity to Dox increased by 8.61, 4.35 and 2.25 times respectively. After treatment with Hal 12.50 micromol/L, MDR1 and MRP mRNA expression were gradually down-regulated in a time-dependent manner on d1-d3, reducing to 76.3% and 64.6% of the control level on d3 (P < 0.05), while GSTpi mRNA expression decreased by 66.1% (P < 0.05) on d1-d2, and began to recover on d3. The swelling-activated chloride channel and cell regulatory volume decreased (RVD) in K562/Dox cells were also inhibited by Hal. Under hypotonic challenge the cellular fluorescence intensity which represented chloride concentration declined by (34.46 +/- 5.91)%. After adding 6.25 micromol/L and 18.75 micromol/L Hal, the hypotonic challenge only caused decrease in fluorescence intensity by (24.43 +/- 3.25)% and (16.63 +/- 4.98)% (P < 0.01). RVD in hypotonic condition was (84.95 +/- 5.69)%. RVD under hypotonic condition with 6.25 micromol/L and 18.75 micromol/L Hal were (51.12 +/- 6.01)% and (39.51 +/- 4.79)% respectively (P < 0.01).
CONCLUSIONA nontoxic concentration of haloperidol can significantly reverse drug resistance through a multi-pathway effect, including down-regulating mRNA expressions of MDR, GSTpi and MRP, inhibition of swelling-activated chloride channel and RVD in K562/Dox cells.
ATP-Binding Cassette, Sub-Family B, Member 1 ; biosynthesis ; genetics ; Antibiotics, Antineoplastic ; pharmacology ; Chloride Channels ; drug effects ; Doxorubicin ; pharmacology ; Drug Resistance, Multiple ; drug effects ; Drug Resistance, Neoplasm ; drug effects ; Glutathione S-Transferase pi ; Glutathione Transferase ; biosynthesis ; genetics ; Haloperidol ; pharmacology ; Humans ; Isoenzymes ; biosynthesis ; genetics ; K562 Cells ; Multidrug Resistance-Associated Proteins ; biosynthesis ; genetics ; RNA, Messenger ; biosynthesis ; genetics
10.Expression and characterization of subunit C of mouse lactate dehydrogenase in Escherichia coli.
Yongzhong XIONG ; Dezhu ZHENG ; Fei XIE ; Xiangdong TU ; Fenghua LAN
National Journal of Andrology 2004;10(1):9-11
OBJECTIVESTo construct a prokaryotic recombinant vector for mouse lactate dehydrogenase-C and to detect its expression in BL21.
METHODSThe coding sequence of mouse lactate dehydrogenase subunit C was amplified from mouse testis RNA with specific primers, and cloned into pGEX-2T after the restriction digestion with BamH I and EcoR I. GST fusion protein was expressed after induction with IPTG.
RESULTSSequencing and restriction digestion of the recombinant plasmid revealed the existence of coding sequence for mouse lactate dehydrogenase subunit C. A protein band of about 60,000 could be induced by IPTG in the recombinant plasmid.
CONCLUSIONSThe coding sequence of mouse lactate dehydrogenase subunit C was introduced into the pGEX-2T plasmid and a GST-fused protein could be induced at a high level.
Animals ; Escherichia coli ; genetics ; Glutathione Transferase ; genetics ; Isoenzymes ; genetics ; L-Lactate Dehydrogenase ; genetics ; Male ; Mice ; Recombinant Fusion Proteins ; biosynthesis ; Spermatozoa ; enzymology

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