1.Lower respiratory tract infection caused by influenza virus A and influenza virus B in Wenzhou, China: a clinical analysis of 366 children.
Pei-Pei ZHONG ; Hai-Lin ZHANG ; Xiao-Fang CHEN ; Ya-Feng LIANG ; Li LIN ; Shao-Yan YANG ; Jiang-Yin SHENG ; Chang-Chong LI
Chinese Journal of Contemporary Pediatrics 2016;18(2):117-122
OBJECTIVETo compare the epidemiological and clinical features of lower respiratory tract infection (LRTI) caused by influenza virus A (IVA) and influenza virus B (IVB) in children.
METHODSThe clinical data of 366 children with LRTI caused by influenza virus (IV), who were hospitalized in Yuying Children′s Hospital of Wenzhou Medical University between 2010 and 2014, were analyzed retrospectively, and there were 272 cases caused by IVA and 94 cases caused by IVB.
RESULTSIV was mainly prevalent from December to March of the next year, with the predominance of IVA. There were small peaks of IVA prevalence in July or September every other year, and IVB was prevalent from December to March of the next year every other year. The children with LRTI caused by IVA alone had a significantly higher white blood cell (WBC) count and significantly higher percentages of children with increased WBC, abnormal serum sodium, and abnormal serum potassium than those caused by IVB alone (P<0.05). However, there were no significant differences in age, sex, underlying diseases, clinical manifestations, and co-infection rate with bacteria or atypical pathogens between the two groups (P>0.05). The rate of co-infection with respiratory syncytial virus (RSV) was significantly higher in the IVB group than in the IVA group (P<0.01).
CONCLUSIONSIVA is prevalent in winter and spring every year and has small peaks in summer every other year, while IVB is prevalent in winter and spring every other year. Compared with IVB, IVA causes more cases of increased WBC and electrolyte disturbance. The children infected with IVB are more likely to be co-infected with RSV. The children with LRTI caused by IVA and IVB have similar clinical manifestations.
Child ; Child, Preschool ; China ; epidemiology ; Female ; Humans ; Infant ; Infant, Newborn ; Influenza A virus ; genetics ; isolation & purification ; physiology ; Influenza B virus ; genetics ; isolation & purification ; physiology ; Influenza, Human ; diagnosis ; epidemiology ; virology ; Male ; Respiratory Tract Infections ; diagnosis ; epidemiology ; virology ; Retrospective Studies ; Seasons
2.Genotyping Influenza Virus by Next-Generation Deep Sequencing in Clinical Specimens.
Moon Woo SEONG ; Sung Im CHO ; Hyunwoong PARK ; Soo Hyun SEO ; Seung Jun LEE ; Eui Chong KIM ; Sung Sup PARK
Annals of Laboratory Medicine 2016;36(3):255-258
Rapid and accurate identification of an influenza outbreak is essential for patient care and treatment. We describe a next-generation sequencing (NGS)-based, unbiased deep sequencing method in clinical specimens to investigate an influenza outbreak. Nasopharyngeal swabs from patients were collected for molecular epidemiological analysis. Total RNA was sequenced by using the NGS technology as paired-end 250 bp reads. Total of 7 to 12 million reads were obtained. After mapping to the human reference genome, we analyzed the 3-4% of reads that originated from a non-human source. A BLAST search of the contigs reconstructed de novo revealed high sequence similarity with that of the pandemic H1N1 virus. In the phylogenetic analysis, the HA gene of our samples clustered closely with that of A/Senegal/VR785/2010(H1N1), A/Wisconsin/11/2013(H1N1), and A/Korea/01/2009(H1N1), and the NA gene of our samples clustered closely with A/Wisconsin/11/2013(H1N1). This study suggests that NGS-based unbiased sequencing can be effectively applied to investigate molecular characteristics of nosocomial influenza outbreak by using clinical specimens such as nasopharyngeal swabs.
Databases, Genetic
;
Genotype
;
High-Throughput Nucleotide Sequencing
;
Humans
;
Influenza A Virus, H1N1 Subtype/classification/*genetics/isolation & purification
;
Influenza, Human/diagnosis/*virology
;
Nasopharynx/*virology
;
Nucleic Acid Amplification Techniques
;
Phylogeny
;
RNA, Viral/analysis/metabolism
;
Sequence Analysis, RNA
;
Viral Proteins/genetics
3.Utilization of the respiratory virus multiplex reverse transcription-polymerase chain reaction test for adult patients at a Korean tertiary care center.
Mi Young AHN ; Seong Ho CHOI ; Jin Won CHUNG ; Hye Ryoun KIM
The Korean Journal of Internal Medicine 2015;30(1):96-103
BACKGROUND/AIMS: Respiratory viruses (RVs) are considered to be important respiratory pathogens in adult patients, and the multiplex reverse transcription-polymerase chain reaction (RT-PCR) test is used frequently in adult patients with respiratory infections. However, clinical data regarding utilization of the multiplex RT-PCR test for RVs are lacking. METHODS: We investigated the utilization of the multiplex RT-PCR test for RVs at Chung-Ang University Hospital in Seoul, Korea, between January 2012 and April 2013. RESULTS: During the study period, the multiplex RT-PCR test was performed for 291 adult patients. The test frequency was 4.9% of rapid influenza antigen detection tests and 0.8% of respiratory bacterial culture studies. A turnaround time of < 48 hours was observed in 25.9% of positive tests. Most of the tests were performed for admitted patients (97.9%) with a community-acquired infection (84.2%) during the flu season (82.5%). RVs were detected in 81 of 291 cases (27.8%). The RV positivity rates for community- and hospital-acquired infections did not differ (28.6% vs. 23.9%, p = 0.52). Of 166 patients with pneumonia, 44 (26.5%) had a viral infection. Among the patients with RV-associated pneumonia, an RV other than influenza was detected in 20 patients (45.4%). CONCLUSIONS: The multiplex RT-PCR test for RVs was infrequently performed at a tertiary care center, and the test results were often reported late. The test was most often performed for admitted adult patients with community-acquired infections during the flu season. The utilization of multiplex RT-PCR testing for RVs in current clinical practice should be improved.
Adult
;
Aged
;
Community-Acquired Infections/*diagnosis/virology
;
DNA, Viral/*genetics
;
Female
;
Hospitals, University
;
Humans
;
Influenza, Human/*diagnosis/virology
;
Male
;
Middle Aged
;
Multiplex Polymerase Chain Reaction/*utilization
;
Pneumonia, Viral/*diagnosis/virology
;
Predictive Value of Tests
;
Republic of Korea
;
Reverse Transcriptase Polymerase Chain Reaction/*utilization
;
*Tertiary Care Centers
4.Atypical H7N9 avian influenza.
Chinese Medical Journal 2014;127(13):2491-2491
5.Analysis on diagnosis and treatment of 15 cases with severe influenza A.
Yunlong ZUO ; Yiyu YANG ; Jie HONG ; Zhiyuan WU ; Li YU ; Jianping TAO ; Sitang GONG
Chinese Journal of Pediatrics 2014;52(2):142-145
OBJECTIVETo analyze the diagnosis and treatment characteristics of patients with severe Influenza A.
METHODA retrospective investigation on the clinical manifestation, chest radiography, electronic fiber bronchoscopy and the histology of the cast, rescue course and outcome was conducted in 15 children with severe influenza A during January to May of 2013.
RESULTEleven cases were male, the range of age was 2 to 6 years; 5 cases were female, the range of age was 1 month to 6 years, accouting for 4.2% of hospitalized children with influenza. Three patients had an underlying chronic disease, two had nephrotic syndrome, and one had congenital heart disease. All the 15 cases were diagnosed as severe influenza A virus infection complicated with pneumonia and respiratory failure, of whom 10 cases were infected with H1N1 virus , the other 5 cases could not be identified as H1N1 virus by using H1N1 kit, but none of the 15 cases were infected with H7N9 virus. Of 15 cases, 8 had atelectasis, 4 had pneumothorax, 3 had pneumomediastinum, 4 had pleural effusion, 1 had pneumorrhagia; 12 patients required mechanical ventilation. 1 only required noninvasive mask CPAP, 2 did not require assisted ventilation, they were just given mask oxygen. Seven cases' sputum culture showed combined infection with bacteria and fungi, sputum smear examination detected: G(+) cocci in 2 cases, and G(-) bacilli in the other 2. By using electronic fiber bronchoscopy, bronchial cast was detected in 5 patiens. Histological examination of the bronchial cast revealed a fibrinous exudation containing large quantity of eosinophils, neutrophils in 1 patients, fibrinous exudation and necrotic material containing large quantity of neutrophils in 4 patients. After the bronchial casts were removed, 4 patients were improved greatly. All patients were treated with postural drainage of left and right side position, massage of electric oscillation, strengthening the sputum suction aiming to improve pulmonary ventilation function. Three patients died: 1 case was compliicated with nephrotic syndrome, another case had congenital heart disease, and 1 case hads pneumorrhagia, renal failure and multiple organ dysfunction syndrome (MODS).
CONCLUSIONThe mortality of severe Influenza A is higher if it is complicated with underlying chronic diseases. In children undergoing rapid and progressive respiratory distress with lung atelectasis, consolidation or emphysema on chest X-ray, plastic bronchitis should be considered. Electronic fiber bronchoscopy should be performed early Lung physicotherapeutics still are important assistant measures for improving the pulmonary ventilation function.
Antiviral Agents ; therapeutic use ; Bronchitis ; diagnosis ; therapy ; virology ; Bronchoscopy ; methods ; Child ; Child, Preschool ; Female ; Humans ; Infant ; Influenza A Virus, H1N1 Subtype ; Influenza, Human ; diagnosis ; mortality ; therapy ; Intensive Care Units ; Intubation, Intratracheal ; Male ; Oxygen Inhalation Therapy ; Pneumonia, Viral ; diagnosis ; therapy ; Pulmonary Atelectasis ; diagnosis ; therapy ; virology ; Rare Diseases ; Respiration, Artificial ; Retrospective Studies ; Sputum ; microbiology ; Treatment Outcome
6.Guideline on the prevention and control of seasonal influenza in healthcare setting.
Ji Hyeon BAEK ; Yu Bin SEO ; Won Suk CHOI ; Sae Yoon KEE ; Hye Won JEONG ; Hee Young LEE ; Byung Wook EUN ; Eun Ju CHOO ; Jacob LEE ; Sung Ran KIM ; Young Keun KIM ; Joon Young SONG ; Seong Heon WIE ; Jin Soo LEE ; Hee Jin CHEONG ; Woo Joo KIM
The Korean Journal of Internal Medicine 2014;29(2):265-280
No abstract available.
Antiviral Agents/*therapeutic use
;
Cross Infection/diagnosis/*prevention & control/transmission/virology
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Evidence-Based Medicine/standards
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Humans
;
Infection Control/*standards
;
Infectious Disease Transmission, Patient-to-Professional/prevention & control
;
Infectious Disease Transmission, Professional-to-Patient/prevention & control
;
Influenza Vaccines/*administration & dosage
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Influenza, Human/diagnosis/*prevention & control/transmission/virology
;
Occupational Health Services/*standards
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Risk Factors
;
*Seasons
;
Vaccination/*standards
7.The first confirmed pediatric case with H7N9 avian influenza virus infection in China.
Mei ZENG ; Yan-feng ZHU ; Yan-ling GE ; Ai-mei XIA ; Dong-bo PU ; Hui YU ; Xiao-hong WANG ; Qi-rong ZHU
Chinese Journal of Pediatrics 2013;51(9):665-669
OBJECTIVETo understand the clinical and epidemiological aspects of avian influenza A (H7N9) virus infection in children.
METHODThe clinical data of the first confirmed pediatric case of avian influenza A(H7N9) virus infection were collected, and the epidemiological information, presenting symptoms, laboratory investigation, management and outcome were analyzed. The data of the pediatric cases were also compared with those of the adults cases.
RESULTThe case reported in this paper was a previously healthy 3.6-year-old boy residing in rural area of Shanghai. He had onset of fever and mild rhinorrhea on 31 March 2013 and he was afebrile and well since April 3. Influenza A (H7N9) virus was detected in his nasopharyngeal sample collected on 1 April through national Influenza-like Illness surveillance using real-time reverse transcriptase PCR and virus culture.His family raised domestic poultry with no apparent disease and there was no virological evidence of H7N9 infection. Monitoring and testing of 16 contacts had not found any secondary infection.
CONCLUSIONThe clinical course of H7N9 avian influenza virus infection in children was relatively mild as compared to adult cases. The source of infection and detail of exposure for children have not been known yet. Continued surveillance studies of mild and severe respiratory disease and subclinical infection are essential to further characterize the epidemiology and clinical spectrum of this emerging H7N9 virus infection in children.
Animals ; Child, Preschool ; China ; epidemiology ; Communicable Diseases, Emerging ; Humans ; Influenza A Virus, H7N9 Subtype ; genetics ; isolation & purification ; Influenza in Birds ; Influenza, Human ; diagnosis ; drug therapy ; virology ; Male ; Oseltamivir ; therapeutic use ; Poultry ; Real-Time Polymerase Chain Reaction ; Retrospective Studies ; Reverse Transcriptase Polymerase Chain Reaction
8.A case with non-typical clinical course of H7N9 avian influenza.
Yu-Fang ZHENG ; Ye CAO ; Yun-Fei LU ; Xiu-Hong XI ; Zhi-Ping QIAN ; Lowrie DOUGLAS ; Xi-Nian LIU ; Yan-Bin WANG ; Qi ZHANG ; Shui-Hua LU ; Hong-Zhou LU
Chinese Medical Journal 2013;126(22):4399-4399
9.Clinical variability in onset of influenza A (H7N9) infection.
Shu-Ying WANG ; Shu-Hua REN ; Mei-Xian HUANG ; Dao-Jun YU ; Qiang SHEN ; Hong-Feng ZHAO ; Qiao-Hong LÜ ; Shen-Xian QIAN
Chinese Medical Journal 2013;126(21):4194-4196
Adult
;
Aged
;
Brugada Syndrome
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diagnosis
;
virology
;
Humans
;
Influenza A Virus, H7N9 Subtype
;
pathogenicity
;
Influenza, Human
;
diagnosis
;
virology
;
Male
;
Middle Aged
10.An overview of swine influenza virus infection in humans.
Chinese Journal of Virology 2013;29(5):559-565
Since the first report of a swine influenza virus (SIV) infection in humans in 1958, cases have occurred continuously and increased significantly after the 2009 H1N1 pandemic. Although exposure to swine is thought to be a risk factor for human SIVs infections, approximately half of the reported cases had no known exposure to pigs. Besides, epidemiological investigation showed that several cases had limited human-to-human transmission. Based on the analyses of data on swine influenza virus infection in humans in this review, both the improved SIVs surveillance in humans and swine population and wider vaccination coverage among occupational workers are critical strategies in pandemic preparedness and response.
Animals
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Humans
;
Influenza A virus
;
genetics
;
isolation & purification
;
physiology
;
Influenza, Human
;
diagnosis
;
epidemiology
;
transmission
;
virology
;
Orthomyxoviridae Infections
;
diagnosis
;
epidemiology
;
veterinary
;
virology
;
Swine
;
Swine Diseases
;
diagnosis
;
epidemiology
;
transmission
;
virology
;
Zoonoses
;
diagnosis
;
epidemiology
;
transmission
;
virology

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