1.Comprehensive functional annotation of susceptibility variants identifies genetic heterogeneity between lung adenocarcinoma and squamous cell carcinoma.
Na QIN ; Yuancheng LI ; Cheng WANG ; Meng ZHU ; Juncheng DAI ; Tongtong HONG ; Demetrius ALBANES ; Stephen LAM ; Adonina TARDON ; Chu CHEN ; Gary GOODMAN ; Stig E BOJESEN ; Maria Teresa LANDI ; Mattias JOHANSSON ; Angela RISCH ; H-Erich WICHMANN ; Heike BICKEBOLLER ; Gadi RENNERT ; Susanne ARNOLD ; Paul BRENNAN ; John K FIELD ; Sanjay SHETE ; Loic LE MARCHAND ; Olle MELANDER ; Hans BRUNNSTROM ; Geoffrey LIU ; Rayjean J HUNG ; Angeline ANDREW ; Lambertus A KIEMENEY ; Shan ZIENOLDDINY ; Kjell GRANKVIST ; Mikael JOHANSSON ; Neil CAPORASO ; Penella WOLL ; Philip LAZARUS ; Matthew B SCHABATH ; Melinda C ALDRICH ; Victoria L STEVENS ; Guangfu JIN ; David C CHRISTIANI ; Zhibin HU ; Christopher I AMOS ; Hongxia MA ; Hongbing SHEN
Frontiers of Medicine 2021;15(2):275-291
Although genome-wide association studies have identified more than eighty genetic variants associated with non-small cell lung cancer (NSCLC) risk, biological mechanisms of these variants remain largely unknown. By integrating a large-scale genotype data of 15 581 lung adenocarcinoma (AD) cases, 8350 squamous cell carcinoma (SqCC) cases, and 27 355 controls, as well as multiple transcriptome and epigenomic databases, we conducted histology-specific meta-analyses and functional annotations of both reported and novel susceptibility variants. We identified 3064 credible risk variants for NSCLC, which were overrepresented in enhancer-like and promoter-like histone modification peaks as well as DNase I hypersensitive sites. Transcription factor enrichment analysis revealed that USF1 was AD-specific while CREB1 was SqCC-specific. Functional annotation and gene-based analysis implicated 894 target genes, including 274 specifics for AD and 123 for SqCC, which were overrepresented in somatic driver genes (ER = 1.95, P = 0.005). Pathway enrichment analysis and Gene-Set Enrichment Analysis revealed that AD genes were primarily involved in immune-related pathways, while SqCC genes were homologous recombination deficiency related. Our results illustrate the molecular basis of both well-studied and new susceptibility loci of NSCLC, providing not only novel insights into the genetic heterogeneity between AD and SqCC but also a set of plausible gene targets for post-GWAS functional experiments.
Adenocarcinoma of Lung/genetics*
;
Carcinoma, Non-Small-Cell Lung/genetics*
;
Carcinoma, Squamous Cell/genetics*
;
Genetic Heterogeneity
;
Genetic Predisposition to Disease
;
Genome-Wide Association Study
;
Humans
;
Lung Neoplasms/genetics*
;
Polymorphism, Single Nucleotide
2.Mesenchymal Stem Cells Ameliorate Renal Inflammation in Adriamycin-induced Nephropathy
Hyung Sook KIM ; Jae Seob LEE ; Hong Kyung LEE ; Eun Jae PARK ; Hye Won JEON ; Yu Jeong KANG ; Tae Yong LEE ; Kyung Suk KIM ; Sang Cheol BAE ; Ji Hyun PARK ; Sang Bae HAN
Immune Network 2019;19(5):e36-
Mesenchymal stem cells (MSCs) ameliorate the renal injury in Adriamycin (ADR)-induced nephropathy, but the mechanisms underlying their efficacy remain incompletely understood. In this study, we demonstrated that MSCs increased the survival, recovered body weight loss, and decreased proteinuria and serum creatinine levels in ADR-treated mice. MSCs also prevented podocyte damage and renal fibrosis by decreasing the expression of fibronectin, collagen 1α1, and α-smooth muscle actin. From a mechanistic perspective, MSCs inhibited renal inflammation by lowering the expression of CCL4, CCL7, CCL19, IFN-α/β, TGF-β, TNF-α, and chitinase 3-like 1. In summary, our data demonstrate that MSCs improve renal functions by inhibiting renal inflammation in ADR-induced nephropathy.
Actins
;
Animals
;
Body Weight
;
Chitinase
;
Collagen
;
Creatinine
;
Doxorubicin
;
Fibronectins
;
Fibrosis
;
Inflammation
;
Mesenchymal Stromal Cells
;
Mice
;
Podocytes
;
Proteinuria
3.Early-life exposure to endocrine disrupting chemicals associates with childhood obesity.
Chunxue YANG ; Hin Kiu LEE ; Alice Pik Shan KONG ; Lee Ling LIM ; Zongwei CAI ; Arthur C.K CHUNG
Annals of Pediatric Endocrinology & Metabolism 2018;23(4):182-195
Increasing prevalence of childhood obesity poses threats to the global health burden. Because this rising prevalence cannot be fully explained by traditional risk factors such as unhealthy diet and physical inactivity, early-life exposure to endocrine disrupting chemicals (EDCs) is recognized as emerging novel risk factors for childhood obesity. EDCs can disrupt the hormone-mediated metabolic pathways, affect children’s growth and mediate the development of childhood obesity. Many organic pollutants are recently classified to be EDCs. In this review, we summarized the epidemiological and laboratory evidence related to EDCs and childhood obesity, and discussed the possible mechanisms underpinning childhood obesity and early-life exposure to non-persistent organic pollutants (phthalates, bisphenol A, triclosan) and persistent organic pollutants (dichlorodiphenyltrichloroethane, polychlorinated biphenyls, polybrominated diphenyl ethers, per- and polyfluoroalkyl substances). Understanding the relationship between EDCs and childhood obesity helps to raise public awareness and formulate public health policy to protect the youth from exposure to the harmful effects of EDCs.
Adolescent
;
Diet
;
Endocrine Disruptors*
;
Global Health
;
Halogenated Diphenyl Ethers
;
Humans
;
Metabolic Networks and Pathways
;
Pediatric Obesity*
;
Polychlorinated Biphenyls
;
Prevalence
;
Public Health
;
Risk Factors
4. Ventilator-associated pneumonia among premature infants <34 weeks′ gestational age in neonatal intensive care unit in China: a multicenter study
Shujuan LI ; Weili YAN ; Qi ZHOU ; Shuping HAN ; Jinzhen GUO ; Shiwen XIA ; Shah VIBHUTI ; Sannan WANG ; Yong JI ; Changyi YANG ; Chuanzhong YANG ; Ruobing SHAN ; Ling LIU ; Bin YI ; Jiangqin LIU ; Zhenlang LIN ; Yang WANG ; Ling HE ; Mingxia LI ; Xinnian PAN ; Yan GUO ; Ling CHEN ; Cuiqing LIU ; Qin ZHOU ; Xiaoying LI ; Hong XIONG ; Yujie QI ; Mingyan HEI ; Yun CAO ; Siyuan JIANG ; Yi ZHANG ; K. Lee SHOO
Chinese Journal of Pediatrics 2017;55(3):182-187
Objective:
To investigate the incidence and pathogen distribution of ventilator-associated pneumonia (VAP) among preterm infants admitted to level Ⅲ neonatal intensive care units (NICU) in China.
Method:
A prospective study was conducted in 25 level Ⅲ NICU, enrolling all preterm infants <34 weeks gestational age admitted to the participating NICU within the first 7 days of life from May 2015 to April 2016. Chi-square test,
5.Cell-based Immunotherapy for Colorectal Cancer with Cytokine-induced Killer Cells.
Ji Sung KIM ; Yong Guk KIM ; Eun Jae PARK ; Boyeong KIM ; Hong Kyung LEE ; Jin Tae HONG ; Youngsoo KIM ; Sang Bae HAN
Immune Network 2016;16(2):99-108
Colorectal cancer is the third leading cancer worldwide. Although incidence and mortality of colorectal cancer are gradually decreasing in the US, patients with metastatic colorectal cancer have poor prognosis with an estimated 5-year survival rate of less than 10%. Over the past decade, advances in combination chemotherapy regimens for colorectal cancer have led to significant improvement in progression-free and overall survival. However, patients with metastatic disease gain little clinical benefit from conventional therapy, which is associated with grade 3~4 toxicity with negative effects on quality of life. In previous clinical studies, cell-based immunotherapy using dendritic cell vaccines and sentinel lymph node T cell therapy showed promising therapeutic results for metastatic colorectal cancer. In our preclinical and previous clinical studies, cytokine-induced killer (CIK) cells treatment for colorectal cancer showed favorable responses without toxicities. Here, we review current treatment options for colorectal cancer and summarize available clinical studies utilizing cell-based immunotherapy. Based on these studies, we recommend the use CIK cell therapy as a promising therapeutic strategy for patients with metastatic colorectal cancer.
Cell- and Tissue-Based Therapy
;
Colorectal Neoplasms*
;
Cytokine-Induced Killer Cells*
;
Dendritic Cells
;
Drug Therapy, Combination
;
Humans
;
Immunotherapy*
;
Incidence
;
Lymph Nodes
;
Mortality
;
Prognosis
;
Quality of Life
;
Survival Rate
;
Vaccines
6.Adoptive Cell Therapy of Melanoma with Cytokine-induced Killer Cells.
Ji Sung KIM ; Yong Guk KIM ; Minji PYO ; Hong Kyung LEE ; Jin Tae HONG ; Youngsoo KIM ; Sang Bae HAN
Immune Network 2015;15(2):58-65
Melanoma is the most aggressive skin cancer and its incidence is gradually increasing worldwide. Patients with metastatic melanoma have a very poor prognosis (estimated 5-year survival rate of <16%). In the last few years, several drugs have been approved for malignant melanoma, such as tyrosine kinase inhibitors and immune checkpoint blockades. Although new therapeutic agents have improved progression-free and overall survival, their use is limited by drug resistance and drug-related toxicity. At the same time, adoptive cell therapy of metastatic melanoma with tumor-infiltrating lymphocytes has shown promising results in preclinical and clinical studies. In this review, we summarize the currently available drugs for treatment of malignant melanoma. In addition, we suggest cytokine-induced killer (CIK) cells as another candidate approach for adoptive cell therapy of melanoma. Our preclinical study and several previous studies have shown that CIK cells have potent anti-tumor activity against melanomas in vitro and in an in vivo human tumor xenograft model without any toxicity.
Cell- and Tissue-Based Therapy*
;
Cytokine-Induced Killer Cells*
;
Drug Resistance
;
Heterografts
;
Humans
;
Incidence
;
Lymphocytes, Tumor-Infiltrating
;
Melanoma*
;
Prognosis
;
Protein-Tyrosine Kinases
;
Skin Neoplasms
;
Survival Rate
7.Antiangiogenic Activity of Acer tegmentosum Maxim Water Extract in Vitro and in Vivo.
Eok Cheon KIM ; So Hun KIM ; Shan Ji PIAO ; Tack Joong KIM ; Kiho BAE ; Han Sung KIM ; Soon Sun HONG ; Byoung Ick LEE ; Moonsuk NAM
Journal of Korean Medical Science 2015;30(7):979-987
Angiogenesis, the formation of new blood vessels, is critical for tumor growth and metastasis. Notably, tumors themselves can lead to angiogenesis by inducing vascular endothelial growth factor (VEGF), which is one of the most potent angiogenic factors. Inhibition of angiogenesis is currently perceived as one of the most promising strategies for the blockage of tumor growth. In this study, we investigated the effects of Acer tegmentosum maxim water extract (ATME) on angiogenesis and its underlying signal mechanism. We studied the antiangiogenic activity of ATME by using human umbilical vein endothelial cells (HUVECs). ATME strongly inhibited VEGF-induced endothelial cell proliferation, migration, invasion, and tube formation, as well as vessel sprouting in a rat aortic ring sprouting assay. Moreover, we found that the p44/42 mitogen activated protein (MAP) kinase signaling pathway is involved in the inhibition of angiogenesis by ATME. Moreover, when we performed the in vivo matrigel plug assay, VEGF-induced angiogenesis was potently reduced when compared to that for the control group. Taken together, these results suggest that ATME exhibits potent antiangiogenic activity in vivo and in vitro and that these effects are regulated by the extracellular regulated kinase (ERK) pathway.
Acer/*metabolism
;
Angiogenesis Inhibitors/*pharmacology
;
Animals
;
Cell Line, Tumor
;
Cell Movement/drug effects
;
Cell Proliferation/drug effects
;
Cell Survival
;
Extracellular Signal-Regulated MAP Kinases/*metabolism
;
Hep G2 Cells
;
Human Umbilical Vein Endothelial Cells/*drug effects
;
Humans
;
MAP Kinase Signaling System/drug effects
;
Mice
;
Mice, Inbred C57BL
;
Mitogen-Activated Protein Kinase 1/metabolism
;
Neoplasm Invasiveness/pathology
;
Neovascularization, Pathologic/*drug therapy/prevention & control
;
Nitric Oxide Synthase Type III/metabolism
;
Phosphorylation/drug effects
;
Plant Extracts/pharmacology
;
Rats
;
Rats, Sprague-Dawley
;
Transcription Factors/metabolism
;
Vascular Endothelial Growth Factor A/antagonists & inhibitors/metabolism
8.Preclinical Efficacy and Mechanisms of Mesenchymal Stem Cells in Animal Models of Autoimmune Diseases.
Hong Kyung LEE ; Sang Hee LIM ; In Sung CHUNG ; Yunsoo PARK ; Mi Jeong PARK ; Ju Young KIM ; Yong Guk KIM ; Jin Tae HONG ; Youngsoo KIM ; Sang Bae HAN
Immune Network 2014;14(2):81-88
Mesenchymal stem cells (MSCs) are present in diverse tissues and organs, including bone marrow, umbilical cord, adipose tissue, and placenta. MSCs can expand easily in vitro and have regenerative stem cell properties and potent immunoregulatory activity. They inhibit the functions of dendritic cells, B cells, and T cells, but enhance those of regulatory T cells by producing immunoregulatory molecules such as transforming growth factor-beta, hepatic growth factors, prostaglandin E2, interleukin-10, indolamine 2,3-dioxygenase, nitric oxide, heme oxygenase-1, and human leukocyte antigen-G. These properties make MSCs promising therapeutic candidates for the treatment of autoimmune diseases. Here, we review the preclinical studies of MSCs in animal models for systemic lupus erythematosus, rheumatoid arthritis, Crohn's disease, and experimental autoimmune encephalomyelitis, and summarize the underlying immunoregulatory mechanisms.
Adipose Tissue
;
Arthritis, Rheumatoid
;
Autoimmune Diseases*
;
B-Lymphocytes
;
Bone Marrow
;
Crohn Disease
;
Dendritic Cells
;
Dinoprostone
;
Encephalomyelitis, Autoimmune, Experimental
;
Heme Oxygenase-1
;
Humans
;
Intercellular Signaling Peptides and Proteins
;
Interleukin-10
;
Leukocytes
;
Lupus Erythematosus, Systemic
;
Mesenchymal Stromal Cells*
;
Models, Animal*
;
Nitric Oxide
;
Placenta
;
Stem Cells
;
T-Lymphocytes
;
T-Lymphocytes, Regulatory
;
Umbilical Cord
9.Inhibition of Human Pancreatic Tumor Growth by Cytokine-Induced Killer Cells in Nude Mouse Xenograft Model.
Ji Sung KIM ; Yun Soo PARK ; Ju Young KIM ; Yong Guk KIM ; Yeon Jin KIM ; Hong Kyung LEE ; Hyung Sook KIM ; Jin Tae HONG ; Youngsoo KIM ; Sang Bae HAN
Immune Network 2012;12(6):247-252
Pancreatic cancer is the fourth commonest cause of cancer-related deaths in the world. However, no adequate therapy for pancreatic cancer has yet been found. In this study, the antitumor activity of cytokine-induced killer (CIK) cells against the human pancreatic cancer was evaluated in vitro and in vivo. Human peripheral blood mononuclear cells were cultured with IL-2-containing medium in anti-CD3 for 14 days. The resulting populations of CIK cells comprised 94% CD3+, 4% CD3-CD56+, 41% CD3+CD56+, 11% CD4+, and 73% CD8+. This heterogeneous cell population was called cytokine-induced killer (CIK) cells. At an effector-target cell ratio of 100:1, CIK cells destroyed 51% of AsPC-1 human pancreatic cancer cells, as measured by the 51Cr-release assay. In addition, CIK cells at doses of 3 and 10 million cells per mouse inhibited 42% and 70% of AsPC-1 tumor growth in nude mouse xenograft assays, respectively. This study suggests that CIK cells may be used as an adoptive immunotherapy for pancreatic cancer patients.
Animals
;
Cytokine-Induced Killer Cells
;
Humans
;
Immunotherapy, Adoptive
;
Mice
;
Mice, Nude
;
Pancreatic Neoplasms
;
Transplantation, Heterologous
10.R1467H Variants of Rho Guanine Nucleotide Exchange Factor 11 (ARHGEF11) are Associated with Type 2 Diabetes Mellitus in Koreans.
Qing Song JIN ; So Hun KIM ; Shan Ji PIAO ; Hyun Ae LIM ; Seung Youn LEE ; Seong Bin HONG ; Yong Seong KIM ; Hun Jae LEE ; Moonsuk NAM
Korean Diabetes Journal 2010;34(6):368-373
BACKGROUND: The human Rho guanine nucleotide exchange factor 11 (ARHGEF11) functions as an activator of Rho GTPases and is thought to influence insulin signaling. The R1467H variant of ARHGEF11 has been reported to be associated with susceptibility to type 2 diabetes mellitus (T2DM) in Western populations. METHODS: We investigated the effects of the R1467H variant on susceptibility to T2DM as well as related traits in a Korean population. We genotyped the R1467H (rs945508) of ARHGEF11 in 689 unrelated T2DM patients and 249 non-diabetic individuals and compared the clinical and biochemical characteristics according to different alleles. RESULTS: The H allele was significantly more frequent in T2DM cases than in controls (P = 0.037, 17.1% and 13.1%; respectively). H homozygocity was associated with a higher risk of T2DM compared to those with R/R or R/H genotype (odds ratio, 5.24; 95% confidence interval, 1.06 to 25.83; P = 0.042). The fasting plasma glucose, HbA1c, fasting insulin, HOMA2-IR and HOMA2-%beta levels did not differ significantly between different genotypes. CONCLUSION: Our study replicated associations of the ARHGEF11 polymorphism with increased risk of T2DM in a Korean population and thus supports previous data implicating a potential role of ARHGEF11 in the etiology of T2DM. Further studies revealing the underlying mechanism for this association are needed.
Alleles
;
Diabetes Mellitus, Type 2
;
Fasting
;
Genotype
;
Glucose
;
Guanine
;
Guanine Nucleotide Exchange Factors
;
Humans
;
Insulin
;
Plasma
;
Polymorphism, Single Nucleotide
;
rho GTP-Binding Proteins

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