1.DNA sequences homologous to hepatitis C virus (HCV) in the extrachromosomal circular DNA in peripheral blood mononuclear cells of HCV-negative subjects.
Reinhard H DENNIN ; Jian-Er WO
Journal of Zhejiang University. Science. B 2019;20(8):637-646
		                        		
		                        			OBJECTIVE:
		                        			This study aimed to investigate DNA sequences that are substantially homologous to the corresponding RNA sequence sections of the hepatitis C virus (HCV). These DNA sequences are present in the whole DNA extracted from peripheral blood mononuclear cells (PBMCs) of HCV-negative subjects. We presumed that these experimentally proven 5'-noncoding region (5'-NCR) homologous DNA sequences could be contained in the extrachromosomal circular DNA (eccDNA) fraction as part of the whole cellular DNA.
		                        		
		                        			METHODS:
		                        			Home-made polymerase chain reaction (PCR) with whole cellular and isolated eccDNA, nucleotide basic local alignment search tool (BLASTn) alignments, and tests for patterns of methylation in selected sequence sections were performed.
		                        		
		                        			RESULTS:
		                        			The PCR tests revealed DNA sequences of up to 320 bp that broadly matched the corresponding sequence sections of known HCV genotypes. In contrast, BLASTn alignment searches of published HCV 5'-NCR sequences with human genome databases revealed only sequence segments of up to 36 bp of the 5'-NCR. The composition of these sequences shows missing base pairs, base pair mismatches as well as complete homology with HCV reference sequences. These short sequence sections are present in numerous copies on both the same and different chromosomes. The selected sequence region within the DNA sequences of the 5'-NCR revealed a broad diversity of individual patterns of methylation.
		                        		
		                        			CONCLUSIONS
		                        			The experimental results confirm our assumption that parts of the HCV 5'-NCR genomic RNA sequences are present at the DNA level in the eccDNA fraction of PBMCs. The tests for methylation patterns therein revealed individual methylomes which could represent an epigenetic feature. The respective sequence section might be subject to genetic regulation.
		                        		
		                        		
		                        		
		                        			Computational Biology
		                        			;
		                        		
		                        			DNA Methylation
		                        			;
		                        		
		                        			DNA, Circular/genetics*
		                        			;
		                        		
		                        			DNA, Viral/genetics*
		                        			;
		                        		
		                        			Genome, Human
		                        			;
		                        		
		                        			Genomics
		                        			;
		                        		
		                        			Genotype
		                        			;
		                        		
		                        			Hepacivirus/genetics*
		                        			;
		                        		
		                        			Hepatitis C/virology*
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Leukocytes, Mononuclear/virology*
		                        			;
		                        		
		                        			Polymerase Chain Reaction
		                        			;
		                        		
		                        			RNA, Viral/genetics*
		                        			;
		                        		
		                        			Sequence Alignment
		                        			
		                        		
		                        	
3.Epidemiological Investigation of an Outbreak of Hepatitis A at a Residential Facility for the Disabled, 2011.
Hyun Sul LIM ; Kumbal CHOI ; Saerom LEE
Journal of Preventive Medicine and Public Health 2013;46(2):62-73
		                        		
		                        			
		                        			OBJECTIVES: An outbreak of hepatitis A occurred at a residential facility for the disabled in July 10, 2011. This investigation was carried out to develop a response plan, and to find the infection source of the disease. METHODS: A field epidemiologist investigated the symptoms, vaccination histories, living environments, and probable infection sources with 51 residents and 31 teachers and staff members. In July 25, 81 subjects were tested for the hepatitis A virus antibody, and specimens of the initial 3 cases and the last case were genetically tested. RESULTS: Three cases occurred July 10 to 14, twelve cases August 3 to 9, and the last case on August 29. Among the teachers and staff, no one was IgM positive (on July 25). The base sequences of the initial 3 and of the last case were identical. The vehicle of the outbreak was believed to be a single person. The initial 3 patients were exposed at the same time and they might have disseminated the infection among the patients who developed symptoms in early August, and the last patient might have, in turn, been infected by the early August cases. CONCLUSIONS: The initial source of infection is not clear, but volunteers could freely come into contact with residents, and an infected volunteer might have been the common infection source of the initial patients. Volunteers' washing their hands only after their activity might be the cause of this outbreak. Although there may be other possible causes, it would be reasonable to ask volunteers to wash their hands both before and after their activities.
		                        		
		                        		
		                        		
		                        			Adolescent
		                        			;
		                        		
		                        			Adult
		                        			;
		                        		
		                        			Antibodies, Viral/metabolism
		                        			;
		                        		
		                        			Assisted Living Facilities
		                        			;
		                        		
		                        			Child
		                        			;
		                        		
		                        			Disabled Persons
		                        			;
		                        		
		                        			*Disease Outbreaks
		                        			;
		                        		
		                        			Drinking Water/virology
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Hepatitis A/*epidemiology
		                        			;
		                        		
		                        			Hepatitis A Virus, Human/genetics
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Interviews as Topic
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Middle Aged
		                        			;
		                        		
		                        			RNA, Viral/analysis
		                        			;
		                        		
		                        			Reverse Transcriptase Polymerase Chain Reaction
		                        			;
		                        		
		                        			Young Adult
		                        			
		                        		
		                        	
4.Prevalence of GB virus type C viraemia and subtype infection in MSM population in Beijing.
Meng XU ; Bo SHENG ; Bu-xin KOU ; Feng-li SONG ; Lin YUAN ; Hao WU ; De-xi CHEN ; Zhi-ying LIU
Chinese Journal of Epidemiology 2013;34(7):757-758
		                        		
		                        		
		                        		
		                        			Adult
		                        			;
		                        		
		                        			China
		                        			;
		                        		
		                        			epidemiology
		                        			;
		                        		
		                        			GB virus C
		                        			;
		                        		
		                        			classification
		                        			;
		                        		
		                        			Hepatitis, Viral, Human
		                        			;
		                        		
		                        			epidemiology
		                        			;
		                        		
		                        			virology
		                        			;
		                        		
		                        			Homosexuality, Male
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Male
		                        			
		                        		
		                        	
5.Infantile DiGeorge syndrome: autopsy diagnosis and clinicopathologic analysis in 5 cases.
Yong-jian DENG ; Dong-fang QIAO ; Na TANG ; Liang ZHAO ; Juan-zhi CHEN ; Yan-qing DING
Chinese Journal of Pathology 2012;41(11):742-746
OBJECTIVETo investigate clinicopathological features of DiGeorge syndrome (DGS).
METHODThe clinical features, histological and immunohistochemical findings were analyzed in 5 cases of DGS by autopsy.
RESULTSFive cases of DGS in male infants aged 4 days, 1 month, 7 months, 10 months, and 13 months respectively. Gross and microscopic observations revealed that thymic cortex was depleted of lymphocytes or showed few, dispersed lymphocytes. The thymic medulla showed predominantly epithelial cells with calcified Hassall bodies as well as lymphocyte depletion. T lymphocytes were also scarce in the tonsils, lymph nodes, spleen, and mucosa-associated lymphatic tissue of ileum. In addition, 3 of the 5 patients also showed parathyroid aplasia or dysplasia, and congenital hypertrophy of the ventricular septum.
CONCLUSIONSThe pathological changes indicate that clinicians should be aware of defects of immune system if the infants suffer from severe infections. Pathologists should recognize the importance of abnormalities of lymphohematopoietic tissues in the diagnosis of primary immunodeficiency diseases such as DGS.
Autopsy ; DiGeorge Syndrome ; immunology ; pathology ; virology ; Hepatitis, Viral, Human ; pathology ; Humans ; Hypertrophy, Left Ventricular ; pathology ; Infant ; Infant, Newborn ; Lymphocyte Count ; Male ; Parathyroid Glands ; pathology ; Pneumonia, Viral ; pathology ; T-Lymphocytes ; immunology ; pathology ; Thymus Gland ; pathology
6.Instructional significance of HBV-DNA load in maternal milk on breastfeeding of postpartum women infected with HBV.
Jia-ying HE ; Ying-hua ZHANG ; Yong-le ZHANG ; He-feng HUANG
Chinese Journal of Preventive Medicine 2011;45(11):1004-1006
OBJECTIVETo study the instructional significance of HBV-DNA load in maternal milk on breastfeeding of postpartum women infected with HBV.
METHODSHBV-DNA levels in serum and breast milk were detected by FQ-PCR in 152 postpartum women infected with HBV, and HBV-DNA ≥ 1.0 × 10(3) U/ml was defined as HBV positive. Correlation analysis was also conducted to estimate if there were relations in HBV levels in serum and breast milk.
RESULTSHBV-DNA positive rate were 50.66% (77/152) and 36.18% (55/152) in serum and breast milk, respectively. When HBeAg was positive, HBV-DNA positive rate were 95.38% (62/65) and 76.92% (50/65) in serum and breast milk; however when HBeAg was negative, HBV-DNA positive rate were 17.24% (15/87) and 5.75% (5/87) in serum and breast milk. When the concentration of HBV-DNA was 3-4 lg U/ml in serum, HBV-DNA positive rate was 20.00% (5/25) in breast milk; However, when the concentration of HBV-DNA was higher than 5 lg U/ml in serum, HBV-DNA positive rate was 96.15% (50/52) in breast milk.
CONCLUSIONThe HBV-DNA level in breast milk in postpartum women infected with HBV increased with the HBV-DNA levels in serum. Breastfeeding should be avoided when the concentration of HBV-DNA is higher than 1.0 × 10(3) U/ml in milk.
Adult ; Breast Feeding ; DNA, Viral ; isolation & purification ; Female ; Hepatitis B ; prevention & control ; transmission ; Hepatitis B e Antigens ; blood ; Hepatitis B virus ; Humans ; Infectious Disease Transmission, Vertical ; prevention & control ; Milk, Human ; virology ; Viral Load ; Young Adult
7.Intrahepatic transplantation of in vitro induced autologous bone marrow-derived liver stem cells in patients with posthepatitic cirrhosis.
An-cheng QIN ; Cai-xian LIAO ; Yu WANG ; Jie YUAN ; Yong-ping HUANG ; Xin-xin LIA ; Yong-qiang LAI ; Zu-yuan GONG
Journal of Southern Medical University 2010;30(3):529-521
OBJECTIVETo evaluate the therapeutic effect of in vitro induced autologous bone marrow-derived liver stem cell transplantation for posthepatitic cirrhosis.
METHODSBetween Jun 2008 and Mar 2009, 12 patients with posthepatitic cirrhosis and portal hypertensive underwent azygousportal disconnection and splenectomy in our department. The patients were then divided into two groups to receive autologous bone marrow-deprived liver stem cell infusion via the hepatic artery after in vitro induction for 7 days (n=6) or saline (n=6). The therapeutic effects of the operations on the liver functions and liver fibrosis index were evaluated.
RESULTSAll the patients recovered uneventfully and no side effect of the operation was found. After the operation, the patients receiving bone marrow-deprived liver stem cell infusion showed better hepatic function improvement than those receiving saline infusion (P<0.05).
CONCLUSIONTransplantation of in vitro induced autologous bone marrow-derived liver stem cell via the hepatic artery is safe and effective for treatment of posthepatitic cirrhosis.
Adult ; Bone Marrow Cells ; cytology ; Female ; Hepatitis, Viral, Human ; complications ; Humans ; Liver Cirrhosis ; etiology ; therapy ; virology ; Male ; Middle Aged ; Stem Cell Transplantation ; Transplantation, Autologous
8.Parvovirus B19-induced Pure Red Cell Aplasia in a Liver Transplant Recipient.
Eun Young LEE ; Yonggeun CHO ; Sang Guk LEE ; Jaewoo SONG
The Korean Journal of Laboratory Medicine 2010;30(6):591-594
		                        		
		                        			
		                        			Parvovirus B19 infection is known to cause chronic anemia in immunocompromised hosts, including organ transplant recipients. We report the first case of liver transplant recipient with parvovirus B19-induced pure red cell aplasia in Korea. A 57-yr-old female patient with hepatocellular carcinoma due to hepatitis C virus received a liver transplantation. Two months later, anemia developed and she received periodic red blood cell transfusions. However, chronic anemia persisted and bone marrow examination was performed 8 months after transplantation. Bone marrow aspiration smears showed markedly reduced erythroid precursors with atypical giant pronormoblasts and nuclear remnants with viral inclusions, and characteristic lantern cells were observed in biopsy sections. In addition, parvovirus B19 DNA PCR was positive. She was diagnosed as parvovirus B19-induced pure red cell aplasia and her anemia was improved following intravenous immunoglobulin therapy.
		                        		
		                        		
		                        		
		                        			Blood Transfusion
		                        			;
		                        		
		                        			Bone Marrow/pathology
		                        			;
		                        		
		                        			Carcinoma, Hepatocellular/etiology/therapy
		                        			;
		                        		
		                        			DNA, Viral/analysis
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Hepatitis C/complications/diagnosis
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Immunocompromised Host
		                        			;
		                        		
		                        			Immunoglobulins/therapeutic use
		                        			;
		                        		
		                        			Liver Neoplasms/etiology/therapy
		                        			;
		                        		
		                        			Liver Transplantation
		                        			;
		                        		
		                        			Middle Aged
		                        			;
		                        		
		                        			Parvoviridae Infections/complications/*diagnosis
		                        			;
		                        		
		                        			*Parvovirus B19, Human/genetics
		                        			;
		                        		
		                        			Red-Cell Aplasia, Pure/*diagnosis/therapy/virology
		                        			
		                        		
		                        	
9.Changes in Liver Stiffness after Acute or Chronic Liver Injury due to Viral Hepatitis - Does Fibrosis Exist after Recovery from Acute Viral Hepatitis?.
Jeong Han KIM ; Hyung Joon YIM ; Seung Young KIM ; Jae Hong AHN ; Young Kul JUNG ; Moon Kyung JOO ; Su Hyun KIM ; Ji Hoon KIM ; Yeon Seok SEO ; Jong Eun YEON ; Hong Sik LEE ; Soon Ho UM ; Sang Woo LEE ; Kwan Soo BYUN ; Jae Hyun CHOI ; Ho Sang RYU
The Korean Journal of Gastroenterology 2009;54(3):155-161
		                        		
		                        			
		                        			BACKGROUND/AIMS: Liver stiffness (LS) measurement by transient elastography can estimate the degrees of liver fibrosis in patients with chronic liver disease. However, longitudinal data of LS after recovery of acute viral hepatitis are still lacking. In the present study, we aimed to evaluate among LS of patients at various stages of viral hepatitis and normal control. METHODS: Patients who had admitted at Korea University Ansan Hospital between January 2006 and January 2007 due to acute viral hepatitis and recovered were recruited (group A, n=22). We compared the liver biochmistry and LS of group A with those of healthy control group (group B, n=23), current acute viral hepatitis group (group C, n=49), and chronic viral hepatitis group (group D, n=66). RESULTS: Mean ALT, total bilirubin, and LS level of group A were not different from group B (p=0.318, p=0.116, p=0.125, respectively). However, group A had lower ALT, total bilirubin, and LS values compared to group C (all p<0.001), and lower ALT and LS values compared to group D (p=0.007, p<0.001). The mean total bilirubin was not significantly different from group D (p=0.117). CONCLUSIONS: Our data suggest that liver fibrosis is a long-term sequela of chronic hepatitis, and not developed in patients who recovered from acute viral hepatitis.
		                        		
		                        		
		                        		
		                        			Acute Disease
		                        			;
		                        		
		                        			Adolescent
		                        			;
		                        		
		                        			Adult
		                        			;
		                        		
		                        			Aged
		                        			;
		                        		
		                        			Alanine Transaminase/blood
		                        			;
		                        		
		                        			Bilirubin/analysis
		                        			;
		                        		
		                        			Carrier State
		                        			;
		                        		
		                        			Chronic Disease
		                        			;
		                        		
		                        			Elasticity
		                        			;
		                        		
		                        			Elasticity Imaging Techniques
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Hepatitis, Viral, Human/*complications/diagnosis
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Liver/enzymology/*ultrasonography
		                        			;
		                        		
		                        			Liver Cirrhosis/*ultrasonography/*virology
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Middle Aged
		                        			
		                        		
		                        	
10.Dynamics of HBV covalently closed circular DNA: amplification and clearance.
Ke-Kai ZHAO ; Qian-Li MIAO ; Xiao-Hui MIAO
Chinese Journal of Hepatology 2009;17(10):794-796
		                        		
		                        		
		                        		
		                        			Animals
		                        			;
		                        		
		                        			Antiviral Agents
		                        			;
		                        		
		                        			pharmacology
		                        			;
		                        		
		                        			Cell Cycle
		                        			;
		                        		
		                        			Cell Proliferation
		                        			;
		                        		
		                        			DNA, Circular
		                        			;
		                        		
		                        			physiology
		                        			;
		                        		
		                        			DNA, Viral
		                        			;
		                        		
		                        			physiology
		                        			;
		                        		
		                        			Ducks
		                        			;
		                        		
		                        			Half-Life
		                        			;
		                        		
		                        			Hepatitis B Surface Antigens
		                        			;
		                        		
		                        			metabolism
		                        			;
		                        		
		                        			Hepatitis B Virus, Duck
		                        			;
		                        		
		                        			genetics
		                        			;
		                        		
		                        			physiology
		                        			;
		                        		
		                        			Hepatitis B virus
		                        			;
		                        		
		                        			genetics
		                        			;
		                        		
		                        			physiology
		                        			;
		                        		
		                        			Hepatitis, Viral, Animal
		                        			;
		                        		
		                        			virology
		                        			;
		                        		
		                        			Hepatitis, Viral, Human
		                        			;
		                        		
		                        			virology
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Liver
		                        			;
		                        		
		                        			pathology
		                        			;
		                        		
		                        			virology
		                        			;
		                        		
		                        			Virus Replication
		                        			
		                        		
		                        	
            
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