1.Analysis of ARID1B gene variants in two Chinese pedigrees with Coffin-Siris syndrome.
Yanbao XIANG ; Ru WAN ; Huanzheng LI ; Chenyang XU ; Yunzhi XU ; Shaohua TANG
Chinese Journal of Medical Genetics 2022;39(3):282-285
OBJECTIVE:
To explore the genetic basis for two Chinese pedigrees affected with Coffin-Siris syndrome (CSS).
METHODS:
Whole exome sequencing (WES) was carried out for the probands. Candidate variants were verified by Sanger sequencing of the probands and their family members.
RESULTS:
The two probands were respectively found to harbor a heterozygous c.5467delG (p.Gly1823fs) variant and a heterozygous c.5584delA (p.Lys1862fs) variant of the ARID1B gene, which were both of de novo in origin and unreported previously. Based on the guidelines of American College of Medical Genetics and Genomics, both variants were predicted to be pathogenic (PVS1+PS2+PM2).
CONCLUSION
The c.5467delG (p.Gly1823fs) and c.5545delA (p.Lys1849fs) variants of the ARID1B genes probably underlay the CSS in the two probands. Above results have enabled genetic counselling and prenatal diagnosis for the pedigrees.
Abnormalities, Multiple
;
China
;
DNA-Binding Proteins/genetics*
;
Face/abnormalities*
;
Hand Deformities, Congenital
;
Humans
;
Intellectual Disability
;
Micrognathism
;
Neck/abnormalities*
;
Pedigree
;
Transcription Factors/genetics*
2.Clinical features and genetic analysis of two Chinese patients with Coffin Siris syndrome-1.
Fengyu CHE ; Ying YANG ; Liyu ZHANG ; Xiaoling TIE
Chinese Journal of Medical Genetics 2022;39(8):848-853
OBJECTIVE:
To explore the genetic basis for two unrelated patients with global developmental delay and coarse facial features.
METHODS:
Clinical data and family history of the two pedigrees were collected. Whole exome sequencing and Sanger sequencing were carried out to detect potential variants.
RESULTS:
The two patients have presented with global developmental delay, coarse facies, muscular hypotonia, congenital heart disease, and pectus excavatum, and were found to harbor two de novo loss-of-function variants of the ARID1B gene, namely c.3586delC (p.Gln1196Serfs*15) and c.4954_4957delACGT (p.Thr1652Glyfs*31). Both variants were unreported previously.
CONCLUSION
The nonsense variants of the ARID1B gene probably underlay the etiology in these patients. Above finding has enriched the genotypic and phenotypic spectrum of the disease and provided a basis for prenatal diagnosis.
Abnormalities, Multiple
;
China
;
DNA-Binding Proteins/genetics*
;
Face/abnormalities*
;
Facies
;
Hand Deformities, Congenital/genetics*
;
Humans
;
Intellectual Disability/genetics*
;
Micrognathism/genetics*
;
Neck/abnormalities*
;
Transcription Factors/genetics*
3.Analysis of FGD1 gene variant in a child with Aarskog-Scott syndrome.
Ran WANG ; Jingjing PEI ; Xinye JIANG ; Bingbing GUO ; Caiqin GUO
Chinese Journal of Medical Genetics 2021;38(8):757-760
OBJECTIVE:
To detect pathogenic variant of the FGD1 gene in a boy with Aarskog-Scott syndrome.
METHODS:
Genetic variant was detected by high-throughput sequencing. Suspected variant was verified by Sanger sequencing. The nature and impact of the candidate variant were predicted by bioinformatic analysis.
RESULTS:
The child was found to harbor a novel c.1906C>T hemizygous variant of the FGD1 gene, which has led to conversion of Arginine to Tryptophane at codon 636(p.Arg636Trp). The same variant was found in his mother but not father. Based on the American College of Medical Genetics and Genomics guidelines, the c.1906C>T variant of FGD1 gene was predicted to be likely pathogenic(PM1+PM2+PM5+PP2+PP3+PP4).
CONCLUSION
The novel c.1906C>T variant of the FGD1 gene may underlay the Aarskog-Scott syndrome in this child. Above finding has enabled diagnosis for the boy.
Child
;
Dwarfism
;
Face/abnormalities*
;
Genetic Diseases, X-Linked
;
Genitalia, Male/abnormalities*
;
Guanine Nucleotide Exchange Factors/genetics*
;
Hand Deformities, Congenital/genetics*
;
Heart Defects, Congenital
;
Humans
;
Male
;
Mutation
4.Genetic analysis of a Chinese pedigree affected with congenital split-hand/foot malformation.
Libin MEI ; Xuemei HE ; Haijie GAO ; Yanru HUANG ; Xiaolin WU ; Huan HE ; Ping LI
Chinese Journal of Medical Genetics 2021;38(12):1208-1210
OBJECTIVE:
To analyze the molecular genetics of a Chinese pedigree with congenital hand foot cleft.
METHODS:
Single nucleotide polymorphism microarray (SNP array) was used to analyze the whole genome copy number variation.
RESULTS:
SNP array analysis showed that there was a 433 kb repeat in 10q24.31-10q24.32 region, which contained LBX1, BTRC, POLL, OPCD and FBXW4 genes.
CONCLUSION
Microduplication of chromosome 10q24.31-10q24.32 may be the cause of congenital hand foot cleft in this pedigree.
China
;
DNA Copy Number Variations/genetics*
;
Foot Deformities, Congenital/genetics*
;
Hand Deformities, Congenital/genetics*
;
Humans
;
Pedigree
5.Genetic analysis of a pedigree affected with congenital split-hand/foot malformation.
Qian LI ; Ming TONG ; Canming CHEN ; Yaping JI ; Kai ZHOU ; Guijiang XU ; Suwei HU
Chinese Journal of Medical Genetics 2020;37(4):467-470
OBJECTIVE:
To explore the genetic basis for a Chinese pedigree affected with split hand/foot malformation (SHFM).
METHODS:
Genomic DNA of the proband and other affected members was extracted from peripheral blood samples. Chromosomal microarray analysis was employed to detect genome-wide copy number variations (CNVs).
RESULTS:
A 400 kb microduplication was identified in the 10q24.31-q24.32 region among all affected individuals. The microduplication has involved four genes, namely LBX1, BTRC, POLL and DPCD, in addition with part of FBXW4 gene.
CONCLUSION
The 10q24.31-q24.32 microduplication has segregated with the disease phenotype in this pedigree and probably underlay the SHFM malformation in the patients.
Asian Continental Ancestry Group
;
Chromosome Duplication
;
Chromosomes, Human, Pair 10
;
genetics
;
DNA Copy Number Variations
;
Foot Deformities, Congenital
;
genetics
;
Genetic Testing
;
Hand Deformities, Congenital
;
genetics
;
Humans
;
Limb Deformities, Congenital
;
genetics
;
Pedigree
6.Genetic analysis of one family with congenital limb malformations.
Fengying CAI ; Jijun MA ; Rui PAN ; Chao WANG ; Weichao LI ; Chunquan CAI ; Shuxiang LIN ; Jianbo SHU
Chinese Journal of Medical Genetics 2019;36(9):890-892
OBJECTIVE:
To detect potential mutation in a Chinese pedigree affected with congenital limb malformations.
METHODS:
Clinical data was collected. Genomic DNA was extracted from peripheral blood samples of family members. The zone of polarizing activity regulatory sequence (ZRS) were amplified by PCR and subjected to direct sequencing.
RESULTS:
Among the 13 individuals in this pedigree, there were 4 PPD patients, who were characterized by varying degrees of deformity. The female patients suffered triphalangeal thumb and preaxial polydactyly, while the male patients only had preaxial polydactyly. Only one patient had foot involvement. TA heterogeneous mutations was discovered in the ZRS (105C>G) in all patients, the same mutation was not detected in 2 healthy family members.
CONCLUSION
The inheritance pattern of PPD was autosomal dominant inheritance. There was a significant variability of symptoms among family patients. The heterozygous mutation of the ZRS (105C>G) probably underlie the disease.
Female
;
Genetic Testing
;
Hand Deformities, Congenital
;
genetics
;
Humans
;
Limb Deformities, Congenital
;
genetics
;
Male
;
Membrane Proteins
;
genetics
;
Pedigree
;
Polydactyly
;
genetics
;
Thumb
;
pathology
7.Baller-Gerold Syndrome in a Premature Infant with a Mutation in the RECQL4 Gene
Neonatal Medicine 2019;26(4):240-245
Baller-Gerold syndrome is a rare autosomal recessive disorder characterized by premature fusion of the cranial sutures and malformation of the upper limb extremities at birth. Although the pathogenesis of Baller-Gerold Syndrome is not fully understood, it is mainly caused by mutations in the RecQ like helicase 4 (RECQL4) gene located on chromosome 8q24.3, which encodes the RECQL4 protein involved in normal DNA replication and repair. This study reports the case of a female premature infant with craniosynostosis of bilateral coronal sutures, resulting in a dysmorphic face and hypoplastic thumbs on both hands at birth, which are consistent with the core characteristics of Baller-Gerold syndrome. Diagnostic whole exome sequencing of the patient revealed a homozygous deletion from exon 13 to 18 in the RECQL4 gene. To the best of my knowledge, this is the first reported case of Baller-Gerold syndrome with RECQL4 gene mutation confirmed by diagnostic whole exome sequencing in Korea.
Cranial Sutures
;
Craniosynostoses
;
DNA Replication
;
Exome
;
Exons
;
Extremities
;
Female
;
Hand
;
Hand Deformities
;
Humans
;
Infant, Newborn
;
Infant, Premature
;
Korea
;
Parturition
;
Sutures
;
Thumb
;
Upper Extremity
8.Concurrent SHORT syndrome and 3q duplication syndrome
Alexander M BOAZ ; Salvatore A GRASSO ; Michael J DEROGATIS ; Ellis N BEESLEY
Journal of Genetic Medicine 2019;16(1):15-18
SHORT syndrome is an extremely rare congenital condition due to a chromosomal mutation of the PIK3R1 gene found at 5q13.1. SHORT is a mnemonic representing six manifestations of the syndrome: (S) short stature, (H) hyperextensibility of joints and/or inguinal hernia, (O) ocular depression, (R) Rieger anomaly, and (T) teething delay. Other key aspects of this syndrome not found in the mnemonic include lipodystrophy, triangular face with dimpled chin (progeroid facies, commonly referred to as facial gestalt), hearing loss, vision loss, insulin resistance, and intrauterine growth restriction (IUGR). 3q duplication syndrome is rare syndrome that occurs due to a gain of function mutation found at 3q25.31-33 that presents with a wide array of manifestations including internal organ defects, genitourinary malformations, hand and foot deformities, and mental disability. We present a case of a 2 year and 3 month old male with SHORT syndrome and concurrent 3q duplication syndrome. The patient presented at birth with many of the common manifestations of SHORT syndrome such as bossing of frontal bone of skull, triangular shaped face, lipodystrophy, micrognathia, sunken eyes, and thin, wrinkled skin (progeroid appearance). Additionally, he presented with findings associated with 3q duplication syndrome such as cleft palate and cryptorchidism. Although there is no specific treatment for these conditions, pediatricians should focus on referring patients to various specialists in order to treat each individual manifestation.
Chin
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Cleft Palate
;
Cryptorchidism
;
Depression
;
Facies
;
Fetal Growth Retardation
;
Foot Deformities
;
Frontal Bone
;
Hand
;
Hearing Loss
;
Hernia, Inguinal
;
Humans
;
Insulin Resistance
;
Joints
;
Lipodystrophy
;
Male
;
Micrognathism
;
Parturition
;
Skin
;
Skull
;
Specialization
;
Tooth
;
Tooth Eruption
9.Sports Injury-Related Fingers and Thumb Deformity Due to Tendon or Ligament Rupture.
Rong-Jie BAI ; Hui-Bo ZHANG ; Hui-Li ZHAN ; Zhan-Hua QIAN ; Nai-Li WANG ; Yue LIU ; Wen-Ting LI ; Yu-Ming YIN
Chinese Medical Journal 2018;131(9):1051-1058
BackgroundHand injuries are very common in sports, such as skiing and ball sports. One of the major reasons causing hand and finger deformity is due to ligament and tendon injury. The aim of this study was to investigate if the high-resolution 3T magnetic resonance imaging (MRI) can demonstrate the complex anatomy of the fingers and thumb, especially the tendons and ligaments, and provide the accurate diagnosis of clinically important fingers and thumbs deformity due to ligamentous and tendinous injuries during sport activities.
MethodsSixteen fresh un-embalmed cadaveric hands were harvested from eight cadavers. A total of 20 healthy volunteers' hands and 44 patients with fingers or thumb deformity due to sports-related injuries were included in this study. All subjects had MR examination with T1-weighted images and proton density-weighted imaging with fat suppression (PD FS) in axial, coronal, and sagittal plane, respectively. Subsequently, all 16 cadaveric hands were sliced into 2-mm thick slab with a band saw (six in coronal plane, six in sagittal plane, and four in axial plane). The correlation of anatomic sections and the MRI characteristics of tendons of fingers and the ulnar collateral ligament (UCL) at the metacarpal phalangeal joint (MCPJ) of thumb between 20 healthy volunteers and 44 patients (confirmed by surgery) were analyzed.
ResultsThe normal ligaments and tendons in 16 cadaveric hands and 20 volunteers' hands showed uniform low-signal intensity on all the sequences of the MRI. Among 44 patients with tendinous and ligamentous injuries in the fingers or thumb, 12 cases with UCL injury at MCPJ of the thumb (Stener lesion = 8 and non-Stener lesion = 4), 6 cases with the central slip injury, 12 cases with terminal tendon injury, and 14 cases with flexor digitorum profundus injury. The ligaments and tendons disruption manifested as increased signal intensity and poor definition, discontinuity, and heterogeneous signal intensity of the involved ligaments and tendons.
ConclusionsSports injury-related fingers and thumb deformity are relatively common. MRI is an accurate method for evaluation of the anatomy and pathologic conditions of the fingers and thumb. It is a useful tool for accurate diagnosis of the sports-related ligaments and tendons injuries in hand.
Adult ; Athletic Injuries ; diagnosis ; surgery ; Female ; Hand Deformities ; diagnosis ; surgery ; Humans ; Ligaments ; diagnostic imaging ; surgery ; Magnetic Resonance Imaging ; Male ; Metacarpophalangeal Joint ; diagnostic imaging ; surgery ; Middle Aged ; Soft Tissue Injuries ; diagnostic imaging ; surgery ; Tendon Injuries ; diagnostic imaging ; surgery ; Thumb ; abnormalities ; surgery
10.Evaluation of the Outcomes according to Etiology in the Pediatric Pes Planovalgus after Lateral Column Lengthening: By Radiologic and Pedobarographic Measurements.
The Journal of the Korean Orthopaedic Association 2018;53(5):407-414
PURPOSE: Pes planovalgus is one of the most common foot deformities among pediatric orthopedic diseases and is divided into idiopathic and neuromuscular planovalgus according to its etiology. This study evaluated the radiologic and pedobarographic outcomes of the treatment for pes planovalgus in children treated with lateral column lengthening, compared the outcomes according to the etiology, and investigated the correlation between the radiologic and pedobarographic findings. MATERIALS AND METHODS: Sixty-three patients (97 feet), who underwent lateral column lengthening, were divided into groups of 30 patients (47 feet) with neuromuscular disease and 33 patients (50 feet) with idiopathic etiology. The preoperative, immediately postoperative, 1 year, and 3 year follow-up radiographic measurements on the plain radiograph antero-posterior (AP) and lateral view were compared. In pedobarography, the foot pressures were subdivided into 4 areas to measure the contact time, contact area, peak pressure, and maximum force. The pre- and postoperative pedobarographic measurements were compared and the correlations between the radiographic and pedobarographic measurements were evaluated. RESULTS: The radiographic index at the 1st postoperative year and 3rd postoperative follow-up did not show significant differences according to the etiology. In pedobarography, idiopathic planovalgus showed a significant increase in the maximum force in the hindfoot and forefoot. The correlation between the radiologic findings and pedobarographic findings was statistically significant between the tibiocalcaneal angle in the lateral view and the maximum force, and the contact area of hindfoot on pedobarography, between tibiocalcaneal angle in the lateral view and the contact area of the toes in idiopathic planovalgus. In neuromuscular planovalgus, the peak pressure in the hindfoot had a strong negative correlation with talonavicular coverage angle in the AP view and talo-1st metatarsal angle, and the talohorizontal angle in the lateral view. CONCLUSION: Lateral column lengthening is an effective surgical procedure for flatfoot patients. On the other hand, the radiographic examination has limitations for accurate assessments of the postoperative results and prognosis. Qualitative and quantitative evaluations are available by pedobarography and it is a useful instrument for an evaluation of planovalgus when used in conjunction with radiography.
Child
;
Evaluation Studies as Topic
;
Flatfoot
;
Follow-Up Studies
;
Foot
;
Foot Deformities
;
Hand
;
Humans
;
Metatarsal Bones
;
Neuromuscular Diseases
;
Orthopedics
;
Prognosis
;
Radiography
;
Toes

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