1.Genetic Diversity of Toxoplasma gondii Strains from Different Hosts and Geographical Regions by Sequence Analysis of GRA20 Gene.
Hong Rui NING ; Si Yang HUANG ; Jin Lei WANG ; Qian Ming XU ; Xing Quan ZHU
The Korean Journal of Parasitology 2015;53(3):345-348
Toxoplasma gondii is a eukaryotic parasite of the phylum Apicomplexa, which infects all warm-blood animals, including humans. In the present study, we examined sequence variation in dense granule 20 (GRA20) genes among T. gondii isolates collected from different hosts and geographical regions worldwide. The complete GRA20 genes were amplified from 16 T. gondii isolates using PCR, sequence were analyzed, and phylogenetic reconstruction was analyzed by maximum parsimony (MP) and maximum likelihood (ML) methods. The results showed that the complete GRA20 gene sequence was 1,586 bp in length among all the isolates used in this study, and the sequence variations in nucleotides were 0-7.9% among all strains. However, removing the type III strains (CTG, VEG), the sequence variations became very low, only 0-0.7%. These results indicated that the GRA20 sequence in type III was more divergence. Phylogenetic analysis of GRA20 sequences using MP and ML methods can differentiate 2 major clonal lineage types (type I and type III) into their respective clusters, indicating the GRA20 gene may represent a novel genetic marker for intraspecific phylogenetic analyses of T. gondii.
Animals
;
Base Sequence
;
Brazil
;
China
;
Deer
;
*Genetic Variation
;
Genotype
;
Goats
;
Humans
;
Molecular Sequence Data
;
Phylogeny
;
Protozoan Proteins/*genetics/metabolism
;
Sheep
;
Swine
;
Toxoplasma/classification/*genetics/isolation & purification/parasitology/physiology
;
Toxoplasmosis/*parasitology
;
Toxoplasmosis, Animal/*parasitology
;
United States
2.Sequence Diversity in MIC6 Gene among Toxoplasma gondii Isolates from Different Hosts and Geographical Locations.
Zhong Yuan LI ; Hui Qun SONG ; Jia CHEN ; Xing Quan ZHU
The Korean Journal of Parasitology 2015;53(3):341-344
Toxoplasma gondii is an opportunistic protozoan parasite that can infect almost all warm-blooded animals including humans with a worldwide distribution. Micronemes play an important role in invasion process of T. gondii, associated with the attachment, motility, and host cell recognition. In this research, sequence diversity in microneme protein 6 (MIC6) gene among 16 T. gondii isolates from different hosts and geographical regions and 1 reference strain was examined. The results showed that the sequence of all the examined T. gondii strains was 1,050 bp in length, and their A + T content was between 45.7% and 46.1%. Sequence analysis presented 33 nucleotide mutation positions (0-1.1%), resulting in 23 amino acid substitutions (0-2.3%) aligned with T. gondii RH strain. Moreover, T. gondii strains representing the 3 classical genotypes (Type I, II, and III) were separated into different clusters based on the locus of MIC6 using phylogenetic analyses by Bayesian inference (BI), maximum parsimony (MP), and maximum likelihood (ML), but T. gondii strains belonging to ToxoDB #9 were separated into different clusters. Our results suggested that MIC6 gene is not a suitable marker for T. gondii population genetic studies.
Amino Acid Sequence
;
Animals
;
Base Sequence
;
Cats
;
Cell Adhesion Molecules/chemistry/*genetics/metabolism
;
Deer
;
*Genetic Variation
;
Genotype
;
Goats
;
Humans
;
Molecular Sequence Data
;
Phylogeny
;
Protozoan Proteins/chemistry/*genetics/metabolism
;
Sequence Alignment
;
Sheep
;
Swine
;
Toxoplasma/classification/*genetics/isolation & purification/physiology
;
Toxoplasmosis/*parasitology
;
Toxoplasmosis, Animal/*parasitology
3.Sequence Variation in Superoxide Dismutase Gene of Toxoplasma gondii among Various Isolates from Different Hosts and Geographical Regions.
Shuai WANG ; Aiping CAO ; Xun LI ; Qunli ZHAO ; Yuan LIU ; Hua CONG ; Shenyi HE ; Huaiyu ZHOU
The Korean Journal of Parasitology 2015;53(3):253-258
Toxoplasma gondii, an obligate intracellular protozoan parasite of the phylum Apicomplexa, can infect all warm-blooded vertebrates, including humans, livestock, and marine mammals. The aim of this study was to investigate whether superoxide dismutase (SOD) of T. gondii can be used as a new marker for genetic study or a potential vaccine candidate. The partial genome region of the SOD gene was amplified and sequenced from 10 different T. gondii isolates from different parts of the world, and all the sequences were examined by PCR-RFLP, sequence analysis, and phylogenetic reconstruction. The results showed that partial SOD gene sequences ranged from 1,702 bp to 1,712 bp and A + T contents varied from 50.1% to 51.1% among all examined isolates. Sequence alignment analysis identified total 43 variable nucleotide positions, and these results showed that 97.5% sequence similarity of SOD gene among all examined isolates. Phylogenetic analysis revealed that these SOD sequences were not an effective molecular marker for differential identification of T. gondii strains. The research demonstrated existence of low sequence variation in the SOD gene among T. gondii strains of different genotypes from different hosts and geographical regions.
Amino Acid Sequence
;
Animals
;
Base Sequence
;
Cats
;
*Genetic Variation
;
Goats
;
Humans
;
Molecular Sequence Data
;
Phylogeny
;
Protozoan Proteins/chemistry/*genetics/metabolism
;
Sequence Alignment
;
Sheep
;
Superoxide Dismutase/chemistry/*genetics/metabolism
;
Toxoplasma/classification/*enzymology/genetics/isolation & purification
;
Toxoplasmosis/*parasitology
;
Toxoplasmosis, Animal/*parasitology
4.Genetic Diversity of Echinococcus granulosus in Center of Iran.
Nader PESTECHIAN ; Ahmad HOSSEINI SAFA ; Mohammadhasan TAJEDINI ; Mohammad ROSTAMI-NEJAD ; Mohammad MOUSAVI ; Hosseinali YOUSOFI ; Shaghayegh HAGHJOOY JAVANMARD
The Korean Journal of Parasitology 2014;52(4):413-418
Hydatid cyst caused by Echinococcus granulosus is one of the most important parasitic diseases around the world and many countries in Asia, including Iran, are involved with this infection. This disease can cause high mortality in humans as well as economic losses in livestock. To date, several molecular methods have been used to determine the genetic diversity of E. granulosus. So far, identification of E. granulosus using real-time PCR fluorescence-based quantitative assays has not been studied worldwide, also in Iran. Therefore, the aim of this study was to investigate the genetic diversity of E. granulosus from center of Iran using real-time PCR method. A total of 71 hydatid cysts were collected from infected sheep, goat, and cattle slaughtered in Isfahan, Iran during 2013. DNA was extracted from protoscolices and/or germinal layers from each individual cyst and used as template to amplify the mitochondrial cytochrome c oxidase subunit 1 gene (cox1) (420 bp). Five cattle isolates out of 71 isolates were sterile and excluded from further investigation. Overall, of 66 isolates, partial sequences of the cox1 gene of E. granulosus indicated the presence of genotypes G1 in 49 isolates (74.2%), G3 in 15 isolates (22.7%), and G6 in 2 isolates (3.0%) in infected intermediate hosts. Sixteen sequences of G1 genotype had microgenetic variants, and they were compared to the original sequence of cox1. However, isolates identified as G3 and G6 genotypes were completely consistent with original sequences. G1 genotype in livestock was the dominant genotype in Isfahan region, Iran.
Animals
;
Cattle
;
Cluster Analysis
;
DNA, Helminth/chemistry/genetics
;
Echinococcosis/parasitology/*veterinary
;
Echinococcus granulosus/*classification/*genetics/isolation & purification
;
Electron Transport Complex IV/genetics
;
*Genetic Variation
;
Genotype
;
Goats
;
Iran
;
Phylogeny
;
Real-Time Polymerase Chain Reaction
;
Sequence Analysis, DNA
;
Sheep
5.Molecular Characterization of Gastrothylax crumenifer (Platyhelminthes: Gastrothylacidae) from Goats in the Western Part of India by LSU of Nuclear Ribosomal DNA.
Ashwani KUMAR ; Anshu CHAUDHARY ; Chandni VERMA ; Hridaya Shanker SINGH
The Korean Journal of Parasitology 2014;52(6):701-705
The rumen parasite, Gastrothylax crumenifer (Platyhelminthes: Gastrothylacidae), is a highly pathogenic trematode parasite of goat (Capra hircus). It sucks blood that causes acute disease like anemia, and severe economic losses occur due to morbidity and mortality of the ruminant infected by these worms. The study of these rumen paramphistomes, their infection, and public health importance remains unclear in India especially in the western part of state Uttar Pradesh (U.P.), Meerut, India, where the goat meat consumption is very high. This paper provides the molecular characterization of G. crumenifer recovered from the rumen of Capra hircus from Meerut, U.P., India by the partial sequence of 28S rDNA. Nucleotide sequence similarity searching on BLAST of 28S rDNA from parasites showed the highest identity with those of G. crumenifer from the same host Capra hircus. This is the first report of molecular identification of G. crumenifer from this part of India.
Animals
;
Cluster Analysis
;
DNA, Helminth/chemistry/genetics
;
DNA, Ribosomal/chemistry/genetics
;
Goat Diseases/*parasitology
;
Goats
;
India
;
Microscopy, Electron, Scanning
;
Molecular Sequence Data
;
Phylogeny
;
Platyhelminths/*classification/genetics/*isolation & purification/ultrastructure
;
RNA, Ribosomal, 28S/genetics
;
Rumen/parasitology
;
Sequence Analysis, DNA
;
Trematode Infections/parasitology/*veterinary
6.Molecular Characterization of Taenia multiceps Isolates from Gansu Province, China by Sequencing of Mitochondrial Cytochrome C Oxidase Subunit 1.
Wen Hui LI ; Wan Zhong JIA ; Zi Gang QU ; Zhi Zhou XIE ; Jian Xun LUO ; Hong YIN ; Xiao Lin SUN ; Radu BLAGA ; Bao Quan FU
The Korean Journal of Parasitology 2013;51(2):197-201
A total of 16 Taenia multiceps isolates collected from naturally infected sheep or goats in Gansu Province, China were characterized by sequences of mitochondrial cytochrome c oxidase subunit 1 (cox1) gene. The complete cox1 gene was amplified for individual T. multiceps isolates by PCR, ligated to pMD18T vector, and sequenced. Sequence analysis indicated that out of 16 T. multiceps isolates 10 unique cox1 gene sequences of 1,623 bp were obtained with sequence variation of 0.12-0.68%. The results showed that the cox1 gene sequences were highly conserved among the examined T. multiceps isolates. However, they were quite different from those of the other Taenia species. Phylogenetic analysis based on complete cox1 gene sequences revealed that T. multiceps isolates were composed of 3 genotypes and distinguished from the other Taenia species.
Animals
;
China
;
Cluster Analysis
;
Cysticercosis/parasitology/veterinary
;
DNA, Helminth/chemistry/genetics/isolation & purification
;
DNA, Mitochondrial/chemistry/genetics/isolation & purification
;
Electron Transport Complex IV/*genetics
;
*Genetic Variation
;
Goat Diseases/parasitology
;
Goats
;
Phylogeny
;
Polymerase Chain Reaction
;
Protein Subunits/genetics
;
Sequence Analysis, DNA
;
Sheep
;
Sheep Diseases/parasitology
;
Taenia/*classification/genetics/*isolation & purification
7.Cloning and characterization of a selenium-independent glutathione peroxidase (HC29) from adult Haemonchus contortus.
Wei SUN ; Xiaokai SONG ; Ruofeng YAN ; Lixin XU ; Xiangrui LI
Journal of Veterinary Science 2012;13(1):49-58
The complete coding sequence of Haemonchus (H.) contortus HC29 cDNA was generated by rapid amplification of cDNA ends in combination with PCR using primers targeting the 5'- and 3'-ends of the partial mRNA sequence. The cloned HC29 cDNA was shown to be 1,113 bp in size with an open reading frame of 507 bp, encoding a protein of 168 amino acid with a calculated molecular mass of 18.9 kDa. Amino acid sequence analysis revealed that the cloned HC29 cDNA contained the conserved catalytic triad and dimer interface of selenium-independent glutathione peroxidase (GPX). Alignment of the predicted amino acid sequences demonstrated that the protein shared 44.7~80.4% similarity with GPX homologues in the thioredoxin-like family. Phylogenetic analysis revealed close evolutionary proximity of the GPX sequence to the counterpart sequences. These results suggest that HC29 cDNA is a GPX, a member of the thioredoxin-like family. Alignment of the nucleic acid and amino acid sequences of HC29 with those of the reported selenium-independent GPX of H. contortus showed that HC29 contained different types of spliced leader sequences as well as dimer interface sites, although the active sites of both were identical. Enzymatic analysis of recombinant prokaryotic HC29 protein showed activity for the hydrolysis of H2O2. These findings indicate that HC29 is a selenium-independent GPX of H. contortus.
Amino Acid Sequence
;
Animals
;
Base Sequence
;
Cloning, Molecular
;
DNA, Complementary/genetics/isolation & purification
;
Glutathione Peroxidase/*genetics/*metabolism
;
Goat Diseases/parasitology
;
Goats
;
Haemonchiasis/parasitology/prevention & control/*veterinary
;
Haemonchus/*enzymology/*genetics
;
Hydrogen Peroxide/metabolism
;
Molecular Sequence Data
;
Phylogeny
;
RNA, Helminth/chemistry/genetics
;
Random Amplified Polymorphic DNA Technique
;
Rats
;
Rats, Sprague-Dawley
;
Sequence Alignment
;
Sequence Analysis, DNA
8.Congenital Neosporosis in Goats from the State of Minas Gerais, Brazil.
Mary S VARASCHIN ; Christian HIRSCH ; Flademir WOUTERS ; Karen Y NAKAGAKI ; Antonio M GUIMARAES ; Domingos S SANTOS ; Pedro S BEZERRA ; Rafael C COSTA ; Ana P PECONICK ; Ingeborg M LANGOHR
The Korean Journal of Parasitology 2012;50(1):63-67
Congenital Neospora caninum infection was diagnosed in two Saanen goat kids from two distinct herds with a history of abortion and weak newborn goat kids in the Southern region of the State of Minas Gerais, Brazil. The first kid was weak at birth, had difficulty to rise and was unable to nurse. Gross lesions of porencephaly and hydrocephalus ex vacuo were seen. Multifocal necrosis, gliosis and non-supurative encephalitis were observed in the brain. Several parasitic cysts with a thick wall that reacted strongly only with polyclonal antiserum to Neospora caninum were seen in the cerebral cortex, brain stem and cerebellum. The second kid was born from a Neospora caninum seropositive mother that aborted in the last pregnancy. It was born without clinical signs. The diagnosis of neosporosis was based on antibody titer of 1:800 to N. caninum by indirect fluorescence antibody test obtained from blood collected before the goat kid ingested the colostrum and Neospora caninum DNA was detected by polymerase chain reaction and sequenced from placenta. This is the first report of neosporosis in goats in the southeast region of Brazil.
Animals
;
Antibodies, Protozoan/immunology
;
Brazil
;
Coccidiosis/congenital/immunology/parasitology/*veterinary
;
Female
;
Goat Diseases/congenital/immunology/*parasitology
;
Goats
;
Molecular Sequence Data
;
Neospora/genetics/immunology/*isolation & purification/physiology
;
Pregnancy
9.Hematological and Serum Biochemical Analyses in Experimental Caprine Besnoitiosis.
Saeed NAZIFI ; Ahmad ORYAN ; Fatemeh NAMAZI
The Korean Journal of Parasitology 2011;49(2):133-138
This study was undertaken to investigate the hematological and biochemical changes in experimentally infected goats with Besnoitia caprae from the time of infection till 360 days post-infection (PI). Six male goats were inoculated subcutaneously with 13x10(7) bradyzoites of B. caprae, and blood samples were collected from the jugular vein. The total erythrocyte and total leukocyte counts, hematocrit value, and differential leukocyte counts were determined. Serum biochemical analysis, including the total protein, albumin, total globulin, cholesterol, triglyceride, chloride, testosterone, calcium (Ca2+), inorganic phosphorus, sodium (Na+), potassium (K+), iron (Fe2+), glucose, serum amyloid A (SAA), haptoglobin (Hp), fibrinogen, ceruloplasmin, aspartate aminotransferase, alanine aminotransferase, creatine kinase, lactate dehydrogenase, and alkaline phosphatase, was undertaken. Skin biopsy from the limbs were collected at weekly intervals and histologically examined for Besnoitia cysts. Cysts were present in the skin biopsies of the leg of the infected goats from day 28 PI. There were variations in hematological analyses, but no significant difference was seen. From day 30 to 360 PI, results showed that SAA, Hp, fibrinogen, and ceruloplasmin concentrations increased, whereas testosterone concentrations decreased. Infected goats exhibited decrease of albumin and increase of serum total protein and globulin concentrations. By contrast, there were no significant differences in the remained analyses concentrations.
Animals
;
Biopsy
;
Blood Chemical Analysis
;
Coccidiosis/*parasitology/*pathology
;
Disease Models, Animal
;
Erythrocyte Count
;
Goat Diseases/*parasitology/*pathology
;
Goats
;
Hematocrit
;
Histocytochemistry
;
Leukocyte Count
;
Male
;
Sarcocystidae/*isolation & purification/*pathogenicity
;
Skin/pathology
;
Time Factors
10.Status of Haemaphysalis tick infestation in domestic ruminants in Iran.
Sadegh RAHBARI ; Sedigheh NABIAN ; Parviz SHAYAN ; Hamid Reza HADDADZADEH
The Korean Journal of Parasitology 2007;45(2):129-132
The geographical distribution and ecological preferences of Haemaphysalis in domestic animals in Iran were studied 4 times a year from April 2003 to March 2005. A total of 1,622 ixodid tick specimens were collected from 3 different zones. Among them, 108 (6.7%) Haemaphysalis ticks, consisting of 6 species, were identified; H. punctata (3.4%), H. parva (0.5%), H. sulcata (0.6%), H. choldokovskyi (1.7%), H. concinna (0.06%) and Haemaphysalis sp. (0.6%). H. punctata was the most abundant species, whereas H. concinna was the rarest species collected in humid and sub-humid zones on cattle, sheep and goats. H. choldokovskyi was principally collected from sheep and goats grazed in cold mountainous areas. The infested areas consisted of Caspian Sea (Guilan, Mazandaran, Golestan, and central provinces), mountainous (Azarbaiejan, Ardebil, Kohgilouyeh, and Kordestan) and semi-dessert (Khorasan, Semnan, Kerman, Sistan, and Baluchestan) zones. The Caspian Sea zone (23.6%) was the most highly infested region. The results show that various species of Haemaphysalis ticks infest domestic ruminants in Iran and each tick species show characteristic geographical distributions.
Animals
;
Camels
;
Cattle
;
Ecosystem
;
Geography
;
Goats
;
Iran/epidemiology
;
Ixodidae/*classification
;
Ruminants/*parasitology
;
Sheep
;
Tick Infestations/epidemiology/*veterinary

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