1.Genetic characteristics of hemagglutinin and neuraminidase of avian influenza A (H7N9) virus in Guizhou province, 2014-2017.
Y H WAN ; L ZHUANG ; Q N ZHENG ; L J REN ; L FU ; W J JIANG ; G P TANG ; D Z ZHANG ; S J LI
Chinese Journal of Epidemiology 2018;39(11):1465-1471
Objective: To understand the molecular characteristics of hemagglutinin (HA) and neuraminidase (NA) as well as the disease risk of influenza virus A H7N9 in Guizhou province. Methods: RNAs were extracted and sequenced from HA and NA genes of H7N9 virus strains obtained from 18 cases of human infection with H7N9 virus and 6 environmental swabs in Guizhou province during 2014-2017. Then the variation and the genetic evolution of the virus were analyzed by using a series of bioinformatics software package. Results: Homology analysis of HA and NA genes revealed that 2 strains detected during 2014-2015 shared 98.8%-99.2% and 99.2% similarities with vaccine strains A/Shanghai/2/2013 and A/Anhui/1/2013 recommended by WHO, respectively. Two strains detected in 2016 and 14 strains detected in 2017 shared 98.2%-99.3% and 97.6%-98.8% similarities with vaccine strain A/Hunan/02650/2016, respectively. Other 6 stains detected in 2017 shared 99.1%-99.4% and 98.9%-99.3% similarities with strain A/Guangdong/17SF003/2016, respectively. Phylogenetic analysis showed that all the strains were directly evolved in the Yangtze River Delta evolution branch, but they were derived from different small branch. PEVPKRKRTAR↓GLF was found in 6 of 24 strains cleavage site sequences of HA protein, indicating the characteristic of highly pathogenic avian influenza virus. Mutations A134V, G186V and Q226L at the receptor binding sites were found in the HA. All the strains had a stalk deletion of 5 amino acid residue "QISNT" in NA protein, and drug resistance mutation R294K occurred in strain A/Guizhou-Danzhai/18980/2017. In addition, potential glycosylation motifs mutations NCS42NCT were found in the NA of 9 of 24 strains. Conclusions: HA and NA genes of avian influenza A (H7N9) virus showed genetic divergence in Guizhou province during 2014-2017. The mutations of key sites might enhance the virulence of the virus, human beings are more susceptible to it. Hence, the risk of infection is increasing.
Animals
;
Base Sequence
;
Birds
;
China/epidemiology*
;
Genome, Viral
;
Hemagglutinin Glycoproteins, Influenza Virus/immunology*
;
Hemagglutinins/genetics*
;
Humans
;
Influenza A Virus, H7N9 Subtype/isolation & purification*
;
Influenza in Birds
;
Influenza, Human/virology*
;
Neuraminidase/genetics*
;
Phylogeny
;
RNA, Viral/genetics*
;
Sequence Analysis, DNA
2.Virological characteristics of influenza A (H3N2) virus in mainland China during 2013-2014.
Xiyan LI ; Yanhui CHENG ; Minju TAN ; Weijuan HUANG ; Junfeng GUO ; Hejiang WEI ; Ning XIAO ; Yu LAN ; Xiang ZHAO ; Lei YANG ; Zhao WANG ; Dayan WANG ; Yuelong SHU
Chinese Journal of Virology 2015;31(1):30-35
To analyze the antigenic and genetic characteristics of the influenza A (H3N2) virus in mainland China during the surveillance year of 2013-2014, the antigenic characteristics of H3N2 virus were analyzed using reference ferret anti-sera. The nucleotide sequences of the viruses were determined by Sanger dideoxy sequencing, phylogenetic trees were constructed with the neighbor-joining method, and the genetic characteristics of the viruses were determined in comparison to current vaccine strains. The results showed that most of the H3N2 viruses were antigenically closely related to the A/Victoria/361/2011 vaccine strain cell-propagated prototype virus (99.6%). Using the A/Texas/50/2012 egg isolate as the reference antigen, 15.1% of the viruses were found to be closely antigenically related to it, while 11.9% of strains were closely antigenically related to the egg-propagated epidemic strain, A/Shanghai-Changning/1507/2012. Phylogenetic analysis of HA genes indicated that the A(H3N2) viruses in this surveillance year were in the same clade, but no drug resistant mutation was identified in the NA genes. During the 2013-2014 influenza surveillance year, no significant genetic change was detected in either the HA or NA genes of the A(H3N2) viruses, while significant mutations were found in egg isolates resulting from their adaptation during propagation in eggs. The antigenic and genetic changes should be investigated in a timely manner to enable the selection of an appropriate vaccine strain in China.
Animals
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Antigenic Variation
;
Base Sequence
;
Chick Embryo
;
China
;
Genetic Variation
;
Hemagglutinin Glycoproteins, Influenza Virus
;
genetics
;
immunology
;
Humans
;
Influenza A Virus, H3N2 Subtype
;
genetics
;
immunology
;
isolation & purification
;
Influenza, Human
;
virology
;
Molecular Sequence Data
;
Mutation
;
Phylogeny
3.Therapeutic effect of Bushen Huoxue recipe on autoimmune premature ovarian failure mice established by immunization with recombinant porcine zona pellucida 4 antigen.
Chuan-ling TANG ; Fang LI ; Lan SUN ; Da-jin LI
Chinese journal of integrative medicine 2013;19(6):439-445
OBJECTIVETo investigate the efficacy and mechanism of Bushen Huoxue Recipe (, BHR) in the treatment of murine autoimmune premature ovarian failure (POF).
METHODSThe recombinant porcine zona pellucida 4 (pZP4) was expressed in E. coli BL21 (DE3) strain within prokaryotic plasmid pET28a (+), purified by Ni-affinity chromatography and verified by Western blot. Murine autoimmune POF model was established by immunization with pZP4 of female BALB/c mice. Fifty POF mice were randomly divided into 5 groups, which were respectively given low (3.75 mg/kg), moderate (7.5 mg/kg), and high dose (15.0 mg/kg) of BHR by gastrogavage once daily for 20 days, with 17-β-estradiol (0.13 mg/kg) and normal saline as positive and negative control. Estrous cycles were analyzed through vaginal smears, serum estradiol (E) levels, and anti-pZP4 antibody titers were detected by ELISA. The proliferative responses in vitro of spleen lymphocytes to pZP4 antigen restimulation were measured by [(3)H]-thymidine incorporation, and the histomorphology changes of ovary were evaluated by optical microscope.
RESULTSThe purified pZP4 was visible as a single lane with 14.4 kD in SDS-PAGE and Western blot. The murine POF model with lengthening estrous cycles, decreased levels of serum E2, high titers of serum anti-pZP4 antibody, and reduced ovarian follicles and corpus lutea were established by immunization with recombinant pZP4. Treatment with moderate and high dosage BHR significantly increased ovarian follicles and reduced the proliferation of spleen lymphocytes to the pZP4 antigen of POF mice (P <0.05). However, only the high dosage BHR administration significantly improved the estrous cycles, elevated the serum E levels (P <0.01), and decreased the serum anti-pZP4 antibody titers of model mice P<0.05).
CONCLUSIONSThe recombinant pZP4 could evoke the antigen-specific immune response in mice and induce the autoimmune ovarian injury. It has been demonstrated that BHR was able to increase the serum E levels and protect ovarian functions from the autoimmune injury in murine POF model.
Animals ; Disease Models, Animal ; Drugs, Chinese Herbal ; pharmacology ; therapeutic use ; Egg Proteins ; immunology ; isolation & purification ; Female ; Immunization ; Immunocompetence ; drug effects ; Membrane Glycoproteins ; immunology ; isolation & purification ; Mice ; Mice, Inbred BALB C ; Ovary ; drug effects ; immunology ; pathology ; Primary Ovarian Insufficiency ; drug therapy ; immunology ; pathology ; Receptors, Cell Surface ; immunology ; isolation & purification ; Recombinant Proteins ; immunology ; isolation & purification ; Sus scrofa ; Zona Pellucida Glycoproteins
4.Evaluation of glycoproteins purified from adult and larval camel ticks (Hyalomma dromedarii) as a candidate vaccine.
Amr E EL HAKIM ; Yasser E SHAHEIN ; Sobhy ABDEL-SHAFY ; Amira M K ABOUELELLA ; Ragaa R HAMED
Journal of Veterinary Science 2011;12(3):243-249
In order to identify antigens that can help prevent camel tick infestations, three major glycoproteins (GLPs) about 97, 66 and 40 kDa in size were purified from adult and larval Egyptian ticks, Hyalomma (H.) dromedarii, using a single-step purification method with Con-A sepharose. The purified GLPs were evaluated as vaccines against camel tick infestation in rabbits. The rabbits received three intramuscular inoculations of GLPs (20 microg/animal) on days 0, 14, and 28. In the immunoblot analysis, Sera from the immunized rabbits recognized the native GLPs and other proteins from larval and adult H. dromedarii ticks along with those from other tick species such as Rhipicephalus sanguineus but not Ornithodoros moubata. The effects of immunity induced by these GLPs were determined by exposing rabbits to adult H. dromedarii ticks. These results demonstrated that GLP immunization led to a slightly decreased reproductive index and significantly reduced rates of egg hatchability. These results demonstrated that immunization with the purified GLPs can provide protection against infestation by H. dromedarii and some other tick species. Further studies are needed to confirm the effectiveness of immunization with GLPs against other tick species.
Animals
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Antigens/immunology/isolation & purification
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Argasidae/immunology
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Chromatography, Affinity/veterinary
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Electrophoresis, Polyacrylamide Gel/veterinary
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Female
;
Glycoproteins/*immunology/isolation & purification
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Immunoblotting/veterinary
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Injections, Intramuscular/veterinary
;
Ixodidae/growth & development/*immunology
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Life Cycle Stages
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Male
;
Rabbits/*immunology/parasitology
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Reproduction
;
Species Specificity
;
Tick Infestations/immunology/prevention & control/*veterinary
5.Sequence and phylogenetic analysis of the haemagglutinin genes of H9N2 avian influenza viruses isolated in central China during 1998-2008.
Jun ZHAO ; Li-na CHAI ; Ze-lin WANG
Chinese Journal of Virology 2011;27(2):122-128
The purpose of this study is to explore the effects of the HA sequence variation on the pathogenicity and antigenicity of avian influenza virus(AIV). Haemagglutinin (HA) genes from, 6 of 25 avian influenza viruses (AIVs) H9N2 strains with different pathogenicity isolated in central China during last 10 years were amplified by reverse transcriptase PCR (RT-PCR), completely sequenced and phylogenetically analyzed. The purpose of this study was to explore the effects of the HA sequence variation on the pathogenicity and antigenicity of AIV. The results showed that all 6 representative H9N2 isolates belong to low pathogenic AIVs, since none of the amino acid sequences at the cleavage site of the HA of the isolates possessed the basic motif required for highly pathogenic viruses (R-X-R/K-R). There were eight potential glycosylation sites in HA of the isolates, except that 3# and 12# had an extra one. The higher pathogenicity of 3# and 12# was probably due to the extra glycosylation site (145aa-147aa) in HA1, which might alter the conformational structure of HA resulting in the mutation or deletion of the binding sites of anti-HA antibody, and has effects on receptor binding sites thus changed the antigenicity of the virus. Our results suggested that attention should be paid to the transmission and natural evolution of H9N2 AIV in order to control AIV H9N2.
Animals
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Chickens
;
China
;
Computational Biology
;
Glycosylation
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Hemagglutinin Glycoproteins, Influenza Virus
;
chemistry
;
genetics
;
immunology
;
metabolism
;
Influenza A Virus, H9N2 Subtype
;
classification
;
genetics
;
immunology
;
isolation & purification
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Phylogeny
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Reverse Transcriptase Polymerase Chain Reaction
;
Sequence Alignment
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Sequence Analysis, DNA
6.Genetic characterization of HA1 gene of influenza H3N2 virus isolates during 2008-2009 in Zhuhai, China.
Hong-xia LI ; Quan-de WEI ; Li-rong ZHANG ; Jing-tao ZHANG ; Yi-xiong LIN ; Yan-mei FANG ; Yu-ke ZHENG
Chinese Journal of Virology 2011;27(2):117-121
To understand the HA1 genetic variation characterization of influenza H3N2 virus isolates in Zhu-hai during 2008-2009, we selected 20 of H3N2 Influenza strains cultured in MDCK cell. Viral RNAs were extracted and amplified by using RT-PCR. The amplified products were purified after identified by gel electrophoresis and then the nucleotide sequences of the amplicons were determined. The results were analyzed by the software ClustalX and MEGA4. 1. When compared with the amino acid sequences of the epitopes of HA1 district of H3N2 influenza vaccine recommended by WHO in 2008, changes were found in those of H3N2 influenza strains in Zhuhai in 2008: K140I in all of H3N2 influenza strains, L157S in 08-0343 and 08-0677, K158R in 08-0466, 08-0620 and 08-0667, K173E in 08-0466 and 08-0620, K173N in 08-0667, and I192T in 08-0667. The epitopes of HA1 district of H3N2 influenza strains in Zhuhai in 2009 are different from that of H3N2 influenza vaccine during the same time: K173Q and P194L occur in all of H3N2 influenza strains, N144K, K158N, and N189K occur in the strains except the strain 09-0056. HA1 domain of H3N2 influenza strains in 2009 has lost a glycosylation site at amino acid position 144 while the glycosylation sites of HA1 domain of H3N2 influenza stains isolated in 2008 remained. This study suggested that H3N2 influenza virus in Zhuhai in 2008 was not evolved a novel variant and H3N2 influenza variant in 2009 was attributed to antigenic drift in HA1 district.
Animals
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Antigens, Viral
;
immunology
;
Cell Line
;
China
;
Dogs
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Epitopes
;
immunology
;
Glycosylation
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Hemagglutinin Glycoproteins, Influenza Virus
;
chemistry
;
genetics
;
immunology
;
metabolism
;
Humans
;
Influenza A Virus, H3N2 Subtype
;
classification
;
genetics
;
immunology
;
isolation & purification
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Mutation
;
Phylogeny
;
Sequence Analysis, DNA
7.Isolation and characterization of avian metapneumovirus from chickens in Korea.
Ji Sun KWON ; Hyun Jeong LEE ; Seung Hwan JEONG ; Jeong Yong PARK ; Young Ho HONG ; Youn Jeong LEE ; Ho Sik YOUN ; Dong Woo LEE ; Sun Hee DO ; Seung Yong PARK ; In Soo CHOI ; Joong Bok LEE ; Chang Seon SONG
Journal of Veterinary Science 2010;11(1):59-66
Avian metapneumovirus (aMPV) causes upper respiratory tract infections in chickens and turkeys. Although the swollen head syndrome (SHS) associated with aMPV in chickens has been reported in Korea since 1992, this is the study isolating aMPV from chickens in this country. We examined 780 oropharyngeal swab or nasal turbinate samples collected from 130 chicken flocks to investigate the prevalence of aMPV and to isolate aMPV from chickens from 2004-2008. Twelve aMPV subtype A and 13 subtype B strains were detected from clinical samples by the aMPV subtype A and B multiplex real-time reverse transcription polymerase chain reaction (RRT-PCR). Partial sequence analysis of the G glycoprotein gene confirmed that the detected aMPVs belonged to subtypes A and B. Two aMPVs subtype A out of the 25 detected aMPVs were isolated by Vero cell passage. In animal experiments with an aMPV isolate, viral RNA was detected in nasal discharge, although no clinical signs of SHS were observed in chickens. In contrast to chickens, turkeys showed severe nasal discharge and a relatively higher titer of viral excretion than chickens. Here, we reveal the co-circulation of aMPV subtypes A and B, and isolate aMPVs from chicken flocks in Korea.
Animals
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Antibodies, Viral/blood
;
Base Sequence
;
*Chickens
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Glycoproteins/chemistry/genetics
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Metapneumovirus/immunology/*isolation & purification
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Molecular Sequence Data
;
Paramyxoviridae Infections/immunology/*veterinary/virology
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*Phylogeny
;
Poultry Diseases/immunology/*virology
;
RNA, Viral/chemistry/genetics
;
Respiratory Tract Infections/immunology/*veterinary/virology
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Reverse Transcriptase Polymerase Chain Reaction/veterinary
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Sequence Alignment
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Sequence Analysis, DNA
;
Serotyping
;
Specific Pathogen-Free Organisms
;
Turkeys
8.Crystal structure of the swine-origin A (H1N1)-2009 influenza A virus hemagglutinin (HA) reveals similar antigenicity to that of the 1918 pandemic virus.
Wei ZHANG ; Jianxun QI ; Yi SHI ; Qing LI ; Feng GAO ; Yeping SUN ; Xishan LU ; Qiong LU ; Christopher J VAVRICKA ; Di LIU ; Jinghua YAN ; George F GAO
Protein & Cell 2010;1(5):459-467
Influenza virus is the causative agent of the seasonal and occasional pandemic flu. The current H1N1 influenza pandemic, announced by the WHO in June 2009, is highly contagious and responsible for global economic losses and fatalities. Although the H1N1 gene segments have three origins in terms of host species, the virus has been named swine-origin influenza virus (S-OIV) due to a predominant swine origin. 2009 S-OIV has been shown to highly resemble the 1918 pandemic virus in many aspects. Hemagglutinin is responsible for the host range and receptor binding of the virus and is therefore a primary indicator for the potential of infection. Primary sequence analysis of the 2009 S-OIV hemagglutinin (HA) reveals its closest relationship to that of the 1918 pandemic influenza virus, however, analysis at the structural level is necessary to critically assess the functional significance. In this report, we report the crystal structure of soluble hemagglutinin H1 (09H1) at 2.9 Å, illustrating that the 09H1 is very similar to the 1918 pandemic HA (18H1) in overall structure and the structural modules, including the five defined antiboby (Ab)-binding epitopes. Our results provide an explanation as to why sera from the survivors of the 1918 pandemics can neutralize the 2009 S-OIV, and people born around the 1918 are resistant to the current pandemic, yet younger generations are more susceptible to the 2009 pandemic.
Animals
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Cloning, Molecular
;
Crystallography, X-Ray
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Hemagglutinin Glycoproteins, Influenza Virus
;
chemistry
;
genetics
;
immunology
;
isolation & purification
;
Influenza A Virus, H1N1 Subtype
;
chemistry
;
genetics
;
immunology
;
Models, Molecular
;
Protein Conformation
;
Swine
;
virology
9.Evaluation of the protection conferred by several avian infectious bronchitis attenuated vaccines against the field strain CK/CH/LDL/97 I in China.
Xiao-Nan ZHAGN ; Yu WANG ; Cheng-Ren LI ; Qiao-Ran LIU ; Zong Xi HAN ; Yu-Hao SHAO ; Sheng-Wang LIU ; Xian-Gang KONG
Chinese Journal of Virology 2008;24(2):111-116
The entire S1 protein gene of five infectious bronchitis (IB) vaccine strains (JAAS, IBN, Jilin, J9, H120) used in China were compared with that of the IB field isolate CK/CH/LDL/97 I present in China. The nucleotide and deduced amino acid similarities between the five IB vaccine strains and the field strain, CK/CH/LDL/97 I, were not more than 76.4% and 78.7%, respectively. Phylogenetic analysis based on the S1 gene showed that the vaccine strains and the field strain belonged to different clusters and had larger evolutionary distances, indicating that they were of different genotypes. The five vaccine strains were used for protection test against challenge of the field isolate CK/CH/LDL/97 I. The chickens inoculated with five vaccine strains showed morbidity as high as 30%-100% after challenged with the CK/CH/ LDL/97 I strain. The organ samples at 5 days post challenge showed that the viral detection rates were 50%-90% and 10%-30% for trachea and kidney, respectively. The live attenuated vaccines only provided partial protection to the vaccinated chickens against heterologous IBV infection, CK/CH/LDL/97 I.
Animals
;
Antibodies, Viral
;
blood
;
Chickens
;
virology
;
Coronavirus Infections
;
prevention & control
;
veterinary
;
Infectious bronchitis virus
;
classification
;
genetics
;
immunology
;
isolation & purification
;
Membrane Glycoproteins
;
genetics
;
Phylogeny
;
Poultry Diseases
;
prevention & control
;
Spike Glycoprotein, Coronavirus
;
Vaccines, Attenuated
;
immunology
;
Viral Envelope Proteins
;
genetics
;
Viral Vaccines
;
immunology
10.Laboratory diagnosis and molecular characterization of highly pathogenic avian influenza virus (H5N1) in human in Hunan Province in 2005-2006.
Yi-Wei HUANG ; Zi LI ; Hong ZHANG ; Yun-Zhi LIU ; Le-Ying WEN ; Jun-Hua LI ; Li-Dong GAO ; Xin-Sheng ZHAO ; Zhong-Jie LI ; Bi-Yun CHEN ; Yu LAN ; Lei ZHOU ; Yue-Long SHU
Chinese Journal of Virology 2007;23(6):434-439
To determine the etiologic agents of two atypical pneumonia human cases in Hunan Province in 2005-2006 and to study their pathogenic potential, the patients' respiratory tract samples and sera were collected. The respiratory tract samples were tested by real-time RT-PCR and RT-PCR methods, and the sera by hemagglutination-inhibition assay. Virus was isolated from case 2 and its genome was sequenced and analyzed. Results showed the H5 nucleic acid tests of two cases were positive. The H5-specific antibody titer of the convalescence serum of case 1 showed a 4-fold greater rise than that of the acute phase. And case 2's antibody titer of acute phase was negative. The two atypical pneumonia cases were confirmed as the avian influenza A (H5N1) infection cases. Viral strain A/Hunan/1/2006 was isolated from case 2. Phylogenetic and molecular analysis suggested that 8 gene segments of A/Hunan/1/2006 originated from avian viruses. And A/Hunan/1/2006 was similar with viruses isolated from avian in Hunan Province. The isolated virus did not recombine with human influenza viruses and no obvious variation was observed.
Adult
;
Antibodies, Viral
;
blood
;
Child
;
China
;
Female
;
Hemagglutination Inhibition Tests
;
Hemagglutinin Glycoproteins, Influenza Virus
;
genetics
;
Humans
;
Influenza A Virus, H5N1 Subtype
;
classification
;
genetics
;
immunology
;
isolation & purification
;
Influenza, Human
;
diagnosis
;
virology
;
Male
;
Phylogeny

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