1.Effect of the chicken zp1 gene on osteoblast mineralization.
Qiaoxian YUE ; Chenxuan HUANG ; Yinliang ZHANG ; Hui CHEN ; Rongyan ZHOU
Chinese Journal of Biotechnology 2023;39(7):2684-2694
The aim of this study was to clone the chicken zp1 gene encoding zona pellucida 1 (Zp1) and investigate its tissues expression profile and its effect on osteoblast mineralization. The expression level of zp1 was quantified in various tissues of laying hens and in the tibia of the pre- and post-sexual maturity by RT-qPCR. Zp1 overexpressed vector was transfected into chicken calvarial osteoblasts which were induced differentiation for 8 days, and the extracellular mineral and the expression of mineralization-related genes were detected. The full-length chicken zp1 gene is 3 045 bp, encoding 958 amino acids residuals, and has two N-glycosylation sites. The highest expression level of the zp1 gene was found in the liver, followed by the tibia and yolk membrane, while no expression was detected in the heart and eggshell gland. Compared with the pre-sexual maturity hens, the concentration of estrogen (E2) in plasma, the content of glycosaminoglycan (GAG) and the expression level of the zp1 gene in the tibia with post-sexual maturity were higher. The extracellular matrix and the level of osteoblast mineralization-related genes showed a significantly upregulated expression in chicken calvarial osteoblasts with Zp1 overexpressed and addition of estrogen. The expression of the zp1 gene is tissue-specific and positively regulated osteoblast mineralization under the action of estrogen, laying the foundation for elucidating the functional properties of Zp1 in chicken bones during the egg production period.
Female
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Animals
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Zona Pellucida Glycoproteins
;
Membrane Glycoproteins/metabolism*
;
Chickens/genetics*
;
Egg Proteins/metabolism*
;
Receptors, Cell Surface
;
Estrogens
2.Correlation between the mRNA levels of BCRP and LUNX genes and pathological types and stages of patients with non-small cell lung cancer.
Dong CHEN ; Wenjie HAN ; Pei WANG ; Hongbin MA
Chinese Journal of Medical Genetics 2023;40(2):202-207
OBJECTIVE:
To analyze the correlation between the mRNA levels of breast cancer resistance protein (BCRP) and lung-specific X protein (LUNX) genes with pathological types and stages of patients with non-small cell lung cancer (NSCLC) and their significance for prognosis.
METHODS:
Eighty nine patients with NSCLC admitted to Huaihe Hospital of Henan University between June 2015 and June 2018 were recruited, with 55 patients with benign lung lesions admitted during the same period of time selected as the control group. The mRNA levels of BCRP and LUNX genes were detected in the peripheral blood samples from the two groups, and their correlation with the clinicopathological characteristics and prognosis of the patients was analyzed.
RESULTS:
The expression rates of BCRP and LUNX mRNA in the NSCLC group were significantly higher compared with the control group (P < 0.05). The level of BCRP mRNA of the NSCLC patients has correlated with the degree of differentiation and TNM staging (P < 0.05), but not with gender, age, smoking, pathological types and lymph node metastasis (P > 0.05). The level of LUNX mRNA of them has correlated with the degree of differentiation, TNM staging and lymph node metastasis (P < 0.05), but not with gender, age, smoking, and pathological types (P > 0.05). Compared with those with no expression, the overall survival rate of patients with BCRP and LUNX expression was significantly lower (P < 0.05). The degree of differentiation, TNM staging, lymph node metastasis, and expression of the BCRP and LUNX mRNA may all affect the prognosis of the patients.
CONCLUSION
The levels of BCRP and LUNX mRNA in the peripheral blood of patients with NSCLC are significantly increased. The expression of BCRP mRNA is correlated with the degree of differentiation and TNM staging, whilst the expression of LUNX mRNA is correlated with the differentiation degree, TNM staging and lymph node metastasis. Both may be used as independent predictors for the prognosis of patients with NSCLC.
Humans
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ATP Binding Cassette Transporter, Subfamily G, Member 2/genetics*
;
Biomarkers, Tumor/genetics*
;
Carcinoma, Non-Small-Cell Lung/pathology*
;
Glycoproteins/genetics*
;
Lung Neoplasms/pathology*
;
Lymphatic Metastasis
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Neoplasm Proteins/genetics*
;
Phosphoproteins/genetics*
;
Prognosis
;
RNA, Messenger/genetics*
3.Glycosylphosphatidylinositol biosynthesis deficiency 15 caused by GPAA1 gene mutation: a rare disease study.
Qiu-Rong CHEN ; Zhen-Jie ZHANG ; Yi-Xiu LU ; Sun-Bi-Xin YUAN ; Ji LI
Chinese Journal of Contemporary Pediatrics 2023;25(12):1276-1281
A boy, aged 6 years, attended the hospital due to global developmental delay for 6 years and recurrent fever and convulsions for 5 years. The boy was found to have delayed mental and motor development at the age of 3 months and experienced recurrent fever and convulsions since the age of 1 year, with intermittent canker sores and purulent tonsillitis. During the fever period, blood tests showed elevated white blood cell count, C-reactive protein, and erythrocyte sedimentation rate, which returned to normal after the fever subsides. Electroencephalography showed epilepsy, and genetic testing showed compound heterozygous mutations in the GPAA1 gene. The boy was finally diagnosed with glycosylphosphatidylinositol biosynthesis deficiency 15 (GPIBD15) and periodic fever. The patient did not respond well to antiepileptic treatment, but showed successful fever control with glucocorticoid therapy. This article reports the first case of GPIBD15 caused by GPAA1 gene mutation in China and summarizes the genetic features, clinical features, diagnosis, and treatment of this disease, which provides a reference for the early diagnosis and treatment of GPIBD15.
Humans
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Male
;
Fever
;
Glycosylphosphatidylinositols/genetics*
;
Membrane Glycoproteins/genetics*
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Mutation
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Rare Diseases
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Seizures
;
Child
4.Characterization of a monoclonal antibody against the hemagglutinin stem of H7N9 subtype avian influenza virus.
Jiangyan ZHAO ; Yanxiao ZHU ; Jiao HU ; Zenglei HU ; Xiufan LIU
Chinese Journal of Biotechnology 2022;38(1):160-173
The conserved hemagglutinin (HA) stem region of avian influenza virus (AIV) is an important target for designing broad-spectrum vaccines, therapeutic antibodies and diagnostic reagents. Previously, we obtained a monoclonal antibody (mAb) (5D3-1B5) which was reactive with the HA stem epitope (aa 428-452) of H7N9 subtype AIV. To systematically characterize the mAb, we determined the antibody titers, including the HA-binding IgG, hemagglutination-inhibition (HI) and virus neutralizing (VN) titers. In addition, the antigenic epitope recognized by the antibody as well as the sequence and structure of the antibody variable region (VR) were also determined. Moreover, we evaluated the cross-reactivity of the antibody with influenza virus strains of different subtypes. The results showed that the 5D3-1B5 antibody had undetectable HI and VN activities against H7N9 virus, whereas it exhibited strong reactivity with the HA protein. Using the peptide-based enzyme-linked immunosorbent assay and biopanning with a phage-displayed random peptide library, a motif with the core sequence (431W-433Y-437L) in the C-helix domain in the HA stem was identified as the epitope recognized by 5D3-1B5. Moreover, the mAb failed to react with the mutant H7N9 virus which contains mutations in the epitope. The VR of the antibody was sequenced and the complementarity determining regions in the VR of the light and heavy chains were determined. Structural modeling and molecular docking analysis of the VR verified specific binding between the antibody and the C-helix domain of the HA stem. Notably, 5D3-1B5 showed a broad cross-reactivity with influenza virus strains of different subtypes belonging to groups 1 and 2. In conclusion, 5D3-1B5 antibody is a promising candidate in terms of the development of broad-spectrum virus diagnostic reagents and therapeutic antibodies. Our findings also provided new information for understanding the epitope characteristics of the HA protein of H7N9 subtype AIV.
Animals
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Antibodies, Monoclonal
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Antibodies, Viral
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Hemagglutinin Glycoproteins, Influenza Virus/genetics*
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Hemagglutinins
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Influenza A Virus, H7N9 Subtype
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Influenza in Birds
;
Molecular Docking Simulation
5.Expression of influenza B virus hemagglutinin and its immunogenicity determination.
Chen YANG ; Xiaoyu GENG ; Kai YUAN ; Juankun ZHANG ; Haixia XIAO
Chinese Journal of Biotechnology 2022;38(3):1112-1123
Influenza B virus is one of the causes for seasonal influenza, which can account for serious illness or even death in some cases. We tested the expression of extracellular domain of hemagglutinin (HA-ecto) of influenza B viruses in mammalian cells, and then determined the immunogenicity of HA-ecto in mice. The gene sequence encoding influenza B virus HA-ecto, foldon sequence, and HIS tag was optimized and inserted into pCAGGS vector. The opening reading frame (ORF) of neuraminidase was also cloned into pCAGGS. The pCAGGS-HA-ecto and pCAGGS-NA were co-transfected into 293T cells using linear polyethylenimine. Cell supernatant after transfection was collected after 96 h, and the secreted trimmeric HA-ecto protein was purified by nickel ion affinity chromatography and size exclusion chromatography. Subsequently, the mice were immunized with HA-ecto protein, and the corresponding antibody titers were detected by ELISA and hemagglutination inhibition (HAI) assays. The results showed that soluble trimeric HA-ecto protein could be obtained using mammalian cell expression system. Moreover, trimeric HA-ecto protein, in combination with the adjuvant, induced high levels of ELISA and HAI antibodies against homogenous and heterologous antigens in mice. Thus, the soluble HA-ecto protein expressed in mammalian cells could be used as a recombinant subunit vaccine candidate for influenza B virus.
Animals
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Hemagglutinin Glycoproteins, Influenza Virus/genetics*
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Hemagglutinins/genetics*
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Influenza B virus/metabolism*
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Influenza Vaccines/genetics*
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Mammals/metabolism*
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Mice
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Mice, Inbred BALB C
6.Application of Linear Regression Model of Gpnmb Gene in Rat Injury Time Estimation.
Yan-Ru XI ; Yuan-Xin LIU ; Na FENG ; Zhen GU ; Jun-Hong SUN ; Jie CAO ; Qian-Qian JIN ; Qiu-Xiang DU
Journal of Forensic Medicine 2022;38(4):468-472
OBJECTIVES:
To investigate the effects of injury time, postmortem interval (PMI) and postmortem storage temperature on mRNA expression of glycoprotein non-metastatic melanoma protein B (Gpnmb), and to establish a linear regression model between Gpnmb mRNA expression and injury time, to provide aimed at providing potential indexes for injury time estimation.
METHODS:
Test group SD rats were anesthetized and subjected to blunt contusion and randomly divided into 0 h, 4 h, 8 h, 12 h, 16 h, 20 h and 24 h groups after injury, with 18 rats in each group. After cervical dislocation, 6 rats in each group were collected and stored at 0 ℃, 16 ℃ and 26 ℃, respectively. The muscle tissue samples of quadriceps femoris injury were collected at 0 h, 12 h and 24 h postmortem at the same temperature. The grouping method and treatment method of the rats in the validation group were the same as above. The expression of Gpnmb mRNA in rat skeletal muscle was detected by RT-qPCR. The Pearson correlation coefficient was used to evaluate the correlation between Gpnmb mRNA expression and injury time, PMI, and postmortem storage temperature. SPSS 25.0 software was used to construct a linear regression model, and the validation group data was used for the back-substitution test.
RESULTS:
The expression of Gpnmb mRNA continued to increase with the prolongation of injury time, and the expression level was highly correlated with injury time (P<0.05), but had little correlation with PMI and postmortem storage temperature (P>0.05). The linear regression equation between injury time (y) and Gpnmb mRNA relative expression (x) was y=0.611 x+4.489. The back-substitution test proved that the prediction of the model was accurate.
CONCLUSIONS
The expression of Gpnmb mRNA is almost not affected by the PMI and postmortem storage temperature, but is mainly related to the time of injury. Therefore, a linear regression model can be established to infer the time of injury.
Animals
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Rats
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Glycoproteins
;
Linear Models
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Melanoma
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Membrane Glycoproteins/genetics*
;
Postmortem Changes
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Rats, Sprague-Dawley
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RNA, Messenger/metabolism*
;
Time Factors
7.Clinical Characteristics and Genetic Analysis of Klippel-Feil Syndrome.
Zi Quan LI ; Mo Zhao GENG ; Sen ZHAO ; Zhi Hong WU ; Jian Guo ZHANG ; Nan WU ; Yi Peng WANG
Acta Academiae Medicinae Sinicae 2021;43(1):25-31
Objective To summarize clinical characteristics and investigate possible pathogenic gene of Klippel-Feil syndrome(KFS)by the self-designed multigene panel sequencing,so as to decipher the molecular basis for early diagnosis and targeted therapy.Methods From January 2015 to December 2018,we consecutively recruited 25 patients who were diagnosed with KFS in Peking Union Medical College Hospital.The demographic information,clinical manifestations,physical examination and radiological assessments were analyzed.Multigene panel sequencing was performed after DNA extraction from peripheral blood.The possible pathogenic mutations of KFS were explored on the basis of bioinformatics analysis.Results The KFS cohort consisted of 25 patients,including 15 males and 10 females,with a mean age of(12.9±7.3)years.Limited cervical range of motion was the most common clinical feature(12 cases,48%).Based on the Samartzis classification,the proportion of patients suffered from short neck(P=0.031)and limited cervical range of motion(P=0.026)in type Ⅲ KFS was significantly higher than that in type Ⅱ and type Ⅰ KFS.Panel sequencing detected a total of 11 pathogenic missense mutations in eight patients,including COL6A1,COL6A2,CDAN1,GLI3,FLNB,CHRNG,MYH3,POR,and TNXB.There was no pathogenic mutation found in five reported pathogenic genes(GDF6,MEOX1,GDF3,MYO18B and RIPPLY2)associated with KFS.Conclusions Our study has shown that patients with multiple contiguous cervical fusions are more likely to manifest short neck,limited cervical range of motion,and clinical triad.Therefore,these patients need additional attention and follow-up.Our analysis highlights novel KFS-related genetic variants,such as COL6A and CDAN1,extending the spectrum of known mutations contributing to this syndrome and providing a basis for elucidating the pathogenesis of KFS.
Cervical Vertebrae
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Child
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Cohort Studies
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Female
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Glycoproteins
;
Humans
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Klippel-Feil Syndrome/genetics*
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Male
;
Mutation
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Nuclear Proteins
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Radiography
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Transcription Factors/genetics*
8.Liver Tissue-specific Genes IGFALS,CYP3A4,SLC22A1 and CYP2E1 May be Associated with Poor Prognosis of Liver Cancer.
Yan-Yan ZHANG ; Jing CAO ; Xiao-Tong CHEN ; Jun-Hui CHEN ; Yu-Bao ZHENG
Acta Academiae Medicinae Sinicae 2021;43(3):371-381
Objective To explore the function and mechanism of related genes in the occurrence and development of liver cancer, and the possibility of key genes as potential biomarkers and prognostic indicators for the treatment of liver cancer.Methods We selected 4 datasets(GSE57957, GSE121248, GSE36376 and GSE14520)from the GEO database.With
Biomarkers, Tumor/genetics*
;
Carrier Proteins
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Computational Biology
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Cytochrome P-450 CYP2E1
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Cytochrome P-450 CYP3A
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Gene Expression Profiling
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Gene Expression Regulation, Neoplastic
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Gene Regulatory Networks
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Glycoproteins
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Humans
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Liver Neoplasms/genetics*
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Prognosis
;
Protein Interaction Maps
9.Clinical significance of CD34
Xueping LI ; Yuting DAI ; Bing CHEN ; Jinyan HUANG ; Saijuan CHEN ; Lu JIANG
Frontiers of Medicine 2021;15(4):608-620
t(8;21)(q22;q22) acute myeloid leukemia (AML) is a highly heterogeneous hematological malignancy with a high relapse rate in China. Two leukemic myeloblast populations (CD34
Gene Expression
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Granulocyte Precursor Cells
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Humans
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Immunophenotyping
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Leukemia, Myeloid, Acute/genetics*
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Membrane Glycoproteins
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Prognosis
;
Proteins
;
Proto-Oncogene Proteins c-kit/genetics*
10.Amyloidosis cutis dyschromica due to homozygous variants of the GPNMB gene in a Chinese pedigree.
Chinese Journal of Medical Genetics 2021;38(2):123-126
OBJECTIVE:
To explore the genetic basis for a Chinese pedigree affected with amyloidosis cutis dyschromica.
METHODS:
High-throughput sequencing was carried out for the proband. Bioinformatic analysis was used to identify the pathogenic variants. The result was verified by Sanger sequencing.
RESULTS:
A homozygous nonsense variant c.565C>T (p.Arg189X) of the GPNMB gene was identified in the proband, his elder brother and younger sister, which resulted a truncated protein with loss of function. The father of the proband was a heterozygous carrier for the variant. The genotype of his mother was unknown since she had passed away. Based on the American College of Medical Genetics and Genomics standards and guidelines, the c.565C>T variant was predicted to be likely pathogenic (PS3+ PM2+ PP1+PP3).
CONCLUSION
The novel homozygous GPNMB variant probably underlay the amyloidosis cutis dyschromica in this pedigree. Above finding has expanded the spectrum of GPNMB gene variants.
Amyloidosis, Familial/genetics*
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China
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Female
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Homozygote
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Humans
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Male
;
Membrane Glycoproteins/genetics*
;
Mutation
;
Pedigree

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