1.Morphological and molecular identification of Fusarium spp. and Colletotrichum spp. isolated from infected vanilla orchid
Nurdiana Ab Kadir ; Laila Naher ; Fatimah Kayat ; Noorhazira Sidek ; Norhafizah Md. Zain ; Tengku Halimatun Sa&rsquo ; adiah T. Abu Bakar
Malaysian Journal of Microbiology 2021;17(1):42-51
Aims:
This study aimed to isolate and identify fungi involved in causing diseases to Vanilla planifolia as well as to study
their pathogenicity level in causing disease.
Methodology and results:
The diseased parts of vanilla plants were collected from vanilla farms located in Pahang and
Sabah, Malaysia from May 2015 to May 2016. Diseases tissue transplantation was adopted to isolate the fungi for
morphology identification prior to the polymerase chain reaction (PCR) amplification of internal transcribed spacer (ITS)
regions using universal primers for fungi, ITS1 and ITS4. After being isolated, the fungi pathogenicity was tested on
detached fresh and mature vanilla leaves. A total of 22 fungal isolates were identified, Fusarium fujikuroi and F.
oxysporum were the two most recovered species, followed by Colletotrichum gloeosporioides, Fusarium sp., F.
proliferatum and F. solani. Pathogenicity test revealed a significantly high pathogenicity of F. oxysporum and C.
gloeosporiodes (p<0.01) on detached vanilla leaf, with high level of damage.
Conclusion, significance and impact of study
This study provides valuable information on fungi-associated diseases
on vanilla plants grown in Malaysia and can be used for future development in disease management.
Vanilla--microbiology
;
Fusarium--isolation &
;
purification
;
Colletotrichum--isolation &
;
purification
2.Isolation and identification of endophytic fungi from Chelidonium majus and their antifungal activity.
Ting HUANG ; Wei XIE ; Xiao-Dong LIU ; Kai-Xun TANG ; Rui YANG
China Journal of Chinese Materia Medica 2019;44(3):460-464
In order to find new source of antifungal agents, eleven cultivable endophytic fungi were isolated from the roots,stems and leaves of Chelidonium majus by traditional method. Seven of them were identified as Colletotrichum(L1, L2, L3, S1, S3, S4, S5), and three of them were identified as Fusarium(R1,R2,R3) by morphological features and molecular biological technology. The antifungal activity test showed that all the tested fungi displayed some inhibitory activity against five common plant pathogens(C. gloeosporioides, Curvularia lunata, Pyricularia oryza, Alternaria alternate and A. brassicae), and their inhibition rate of some test items were over 60%. Among them, R1, S2, S3 and S4 were more potent than others. This study enriches the understanding of endophytes from Ch. majus and provides a basis for the study of new microbial fungicides.
Alternaria
;
pathogenicity
;
Antibiosis
;
Ascomycota
;
pathogenicity
;
Chelidonium
;
microbiology
;
Colletotrichum
;
chemistry
;
isolation & purification
;
Endophytes
;
chemistry
;
isolation & purification
;
Fusarium
;
chemistry
;
isolation & purification
3.H1-A, a compound isolated from Fusarium oxysporum inhibits hepatitis C virus (HCV) NS3 serine protease.
Li-Yuan YANG ; Jun LIN ; Bin ZHOU ; Yan-Gang LIU ; Bao-Quan ZHU
Chinese Journal of Natural Medicines (English Ed.) 2016;14(4):299-302
The present study was aimed to isolate the active compounds from the fermentation products of Fusarium oxysporum, which had hepatitis C virus (HCV) NS3 protease inhibitory activity. A bioactive compound was isolated by reverse-phase silica-gel column chromatography, silica-gel column chromatography, semi-preparative reverse-phase High Performance Liquid Chromatography (HPLC), and then its molecular structure was elucidated based on the spectrosopic analysis. As a result, the compound (H1-A, 1) Ergosta-5, 8 (14), 22-trien-7-one, 3-hydroxy-,(3β, 22E) was isolated and identified. To the best of our knowledge, this was the first report on the isolation of H1-A from microorganisms with the inhibitory activity of NS3 protease.
Enzyme Inhibitors
;
chemistry
;
isolation & purification
;
metabolism
;
Fusarium
;
chemistry
;
metabolism
;
Hepacivirus
;
drug effects
;
enzymology
;
genetics
;
Hepatitis C
;
virology
;
Humans
;
Magnetic Resonance Spectroscopy
;
Viral Nonstructural Proteins
;
antagonists & inhibitors
;
metabolism
4.Recent Clinical Manifestation and Prognosis of Fungal Endophthalmitis: A 7-Year Experience at a Tertiary Referral Center in Korea.
Dong Yoon KIM ; Hae In MOON ; Soo Geun JOE ; June Gone KIM ; Young Hee YOON ; Joo Yong LEE
Journal of Korean Medical Science 2015;30(7):960-964
This study analyzed the recent causes, prognosis, and treatment strategies for fungal endophthalmitis. A retrospective review of patients who were diagnosed with fungal endophthalmitis at our center was conducted. The fungal organisms isolated from each patient and the visual prognosis according to the route of infection and treatment method were analyzed. A total of 40 eyes from 30 patients with fungal endophthalmitis were included in this study. Candida species were the most common causative organisms in 35 of 40 eyes. Endogenous and exogenous endophthalmitis were observed in 33 and 7 eyes, respectively. Pre- and post-treatment best-corrected visual acuity (BCVA) was not significantly different between endogenous endophthalmitis and exogenous endophthalmitis. The 40 eyes were treated using the following modalities: intravitreal antifungal agent injection with intravenous antifungal agent (16 eyes), vitrectomy with intravenous antifungal agent (14 eyes), intravenous antifungal agent alone (9 eyes), and evisceration (1 eye). Post-treatment BCVA only significantly improved after treatment in the vitrectomy group. Candida species were the most common cause of fungal endophthalmitis, irrespective of the route of infection. The visual prognosis of fungal endophthalmitis was generally poor. In conclusion, if the general condition of the patient tolerates a surgical procedure, prompt vitrectomy and intravitreal injection of antifungal agents can improve visual acuity.
Antifungal Agents/*therapeutic use
;
Aspergillus/isolation & purification
;
Candida/*isolation & purification
;
Endophthalmitis/*drug therapy/*microbiology/pathology/surgery
;
Eye Infections, Fungal
;
Fusarium/isolation & purification
;
Humans
;
Prognosis
;
Republic of Korea
;
Retrospective Studies
;
Scedosporium/isolation & purification
;
Tertiary Care Centers
;
Visual Acuity
;
*Vitrectomy
5.Non-modified magnetic beads coupled with multiple real-time PCR for detection and quantification of mycotoxigenic fungi in paprika samples.
Yan JIN ; Wei-Wei ZHANG ; Su-Yuan WANG ; Zheng-Mao YE ; Li-Shi ZHANG ; Xiao-Fang PEI
Journal of Southern Medical University 2015;35(1):23-28
OBJECTIVETo establish a method for detecting 3 common toxigenic molds (Aspergillus, Penicillium, and Fusarium) based on non-modified magnetic beads coupled with multiple real-time PCR (NMB-multiple qPCR).
METHODSThe primers and genus-specific probes were designed based on the rDNA sequences to develop a multiple real-time PCR using non-modified magnetic bead to enrichment of fungal spores. The sensitivity, specificity and repeatability of this assay were evaluated.
RESULTSThe detection limit of this assay for spiked samples was 10(4) CFU/g, demonstrating a 10-fold greater detection sensitivity of this assay than that of real-time PCR. The NMB-multiple qPCR assay also showed good specificity and reproducibility and yielded comparable results with those by traditional colony counting method for spiked samples (P>0.05).
CONCLUSIONNMB-multiple qPCR assay we established allows rapid and sensitive detection of common mycotoxigenic fungi in paprika.
Aspergillus ; Capsicum ; microbiology ; DNA Primers ; Food Contamination ; analysis ; Food Microbiology ; Fungi ; isolation & purification ; Fusarium ; Magnetic Phenomena ; Penicillium ; Real-Time Polymerase Chain Reaction ; methods ; Reproducibility of Results ; Sensitivity and Specificity
6.Antibacterial components from artificially induced dragon's blood of Dracaena cambodiana.
He-mei JIANG ; Hui WANG ; Jun WANG ; Hao-fu DAI ; Yan-ping LUO ; Wen-li MEI
China Journal of Chinese Materia Medica 2015;40(20):4002-4006
Ten compounds were isolated from the artificially induced dragon's blood of Dracaena cambodiana by various column chromatographies on silica and sephadex LH-20 gel. Based on spectral analysis of NMR and MS, their structures were identified as 3, 4-dihydroxyallylbenzene (1), 3', 4', 5'-trimethoxycinnamylalcohol (2), pinoresinol (3), (2R)-7, 4'-dihydroxy-8-methylflavane (4), (2R)-7,4'-dihydroxy-5-methoxy-8-methylflavane(5),(2S)-7,3'-dihydroxy-4'-methoxy-8-methylflavane(6) ,(2S)-4',7-dihydroxy-6, 8-dimethylflavane(7), 4,2',4'-trihydroxychalcone(8), 4,4'-dihydroxy-2-methoxydihydrochalcon(9) and Cambodianin E (10). Antibacterial activity assay showed that compounds 1, 4 and 10 have inhibitory effect on Fusarium oxysporum f. sp. cuben, Fusarium oxysporum f. sp. niveum, Fusarium oxysporum f. sp. vasinfectum and Ralstonia solanacearum.
Antifungal Agents
;
chemistry
;
isolation & purification
;
pharmacology
;
Dracaena
;
chemistry
;
Drugs, Chinese Herbal
;
chemistry
;
isolation & purification
;
pharmacology
;
Fusarium
;
drug effects
;
Molecular Structure
;
Plant Extracts
;
chemistry
;
isolation & purification
;
pharmacology
;
Spectrometry, Mass, Electrospray Ionization
7.Inhibition of HMG-CoA reductase by MFS, a purified extract from the fermentation of marine fungus Fusarium solani FG319, and optimization of MFS production using response surface methodology.
Yu ZHOU ; Wen-Hui WU ; Qing-Bo ZHAO ; Xiao-Yu WANG ; Bin BAO
Chinese Journal of Natural Medicines (English Ed.) 2015;13(5):346-354
The present study was designed to isolate and characterize a purified extract from Fusarium solani FG319, termed MFS (Metabolite of Fusarium solani FG319) that showed anti-atherosclerosis activity by inhibiting 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) reductase. Response surface methodology (RSM) was employed to achieve an improved yield from the fermentation medium. The inhibiting effect of the isolate, MFS, on HMG-CoA reductase was greater than that of the positive control, lovastatin. The average recovery of MFS and the relative standard deviation (RSD) ranged between 99.75% to 101.18%, and 0.31% to 0.74%, respectively. The RSDs intra- and inter-assay of the three samples ranged from 0.288% to 2.438%, and from 0.934% to 2.383%, respectively. From the RSM, the concentration of inducer, cultivation time, and culture temperatures had significant effects on the MFS production, with the effect of inducer concentration being more pronounced that other factors. In conclusion, the optimal conditions for the MFS production were achieved using RSM and that MFS could be explored as an anti-atherosclerosis agent based on its ability to inhibit HMG-CoA reductase.
Analysis of Variance
;
Biological Factors
;
isolation & purification
;
pharmacology
;
Chromatography, High Pressure Liquid
;
Fermentation
;
physiology
;
Fusarium
;
metabolism
;
Hydroxymethylglutaryl CoA Reductases
;
metabolism
;
Hydroxymethylglutaryl-CoA Reductase Inhibitors
;
isolation & purification
;
pharmacology
;
Lovastatin
;
pharmacology
;
Nucleic Acid Amplification Techniques
8.Research wilt disease of Salvia miltiorrhiza and its pathogen.
Li YANG ; Zuo-Qing MIAO ; Guang YANG ; Ai-Juan SHAO ; Lu-Qi HUANG ; Ye SHEN ; Xue WANG ; Mei-Lan CHEN
China Journal of Chinese Materia Medica 2013;38(23):4040-4043
Salvia miltiorrhiza is a highly valued traditional chinese medicine for the treatment of atherosclerosis-related disorders in china, such as cardiovascular and cerebrovascular diseases in China. The wilt disease is serious in the culture of S. miltiorrhiza. Wilt disease cause biomass of plant shoots and roots is lessened, active components are decreased. To solve these problems, we research the pathogen causing wilt disease of S. miltiorrhiza. The suspected pathogen is identified by morphology and etiological test. The identification was further confirmed by alignment the sequences of internal transcribed spacer (ITS) amplified by PCR. Our result show the wilt disease of S. miltiorrhiza mostly occurred in July and August, which is hot and wetter. The wilt disease rate of S. miltiorrhiza continuous cropping for one year in S. miltiorrhiz stubble is 10%, but the wilt disease rate of S. miltiorrhiza continuous cropping for three years in S. miltiorrhiz stubble is 60%-70%. The root rot of S. miltiorrhiz caused by the wilt disease, so the wilt disease was mistaken for the rot root in production. Morphological characteristics show the pathogen is Fusarium oxysporum. The sequence of ITS wes determined and found by BLAST shared 99% identity to that of F. oxysporum f. sp. cucumerinum. So it comes to the conclusion that the causing agent of wilt disease on S. miltiorrhiza belongs to F. oxysporum.
DNA, Intergenic
;
genetics
;
Fusarium
;
genetics
;
isolation & purification
;
physiology
;
Plant Diseases
;
microbiology
;
Polymerase Chain Reaction
;
Salvia miltiorrhiza
;
microbiology
;
Seasons
9.Molecular analysis and anticancer properties of two identified isolates, Fusarium solani and Emericella nidulans isolated from Wady El-Natron soil in Egypt against Caco-2 (ATCC) cell line.
Asian Pacific Journal of Tropical Biomedicine 2012;2(11):863-869
OBJECTIVETo characterize, identify and investigate the anticancer properties of two new soil fungal isolates, Emericella nidulans and Fusarium solani isolated from Wady El-Natron in Egypt against colon cancer Caco-2 (ATCC) cell line.
METHODSSoil sample was cultured and two strains were chosen for morphological and phenotypical characterization. Partial sequences of the 18s rRNA gene and the internal transcribed spacer region ITS of the two isolates were amplified by PCR. Phylogenetic tree construction and analysis of the resulted multiple sequences from the two fugal isolates were also carried out. In vitro anticancer activity of the two strains was done against colon Caco-2 cancer cell line. Reverse transcription - PCR was carried out to detect level of expression of p53 in Caco-2 cell line.
RESULTSHF.1 displayed morphological and genotypic characteristics most similar to that of Fusarium solani while HF.2 was most similar to Emericella nidulans with high similarity of 99% and 97% respectively. The multiple sequence alignment of the two fungal isolates showed that, the maximum identical conserved domains in the 18s rRNA genes were identified with the nucleotide regions of 51st to 399th base pairs, 88th to 525th base pairs respectively. While those in the ITS genes were identified with the nucleotide regions of 88th to 463rd and 51st to 274th. The two isolates showed IC50 value with (6.24±5.21) and (9.84±0.36) µg/mL) concentrations respectively at 28h. Reverse transcription - PCR indicated that these cells showed high level of expression for p53 mRNA.
CONCLUSIONSThe morphology and molecular analysis identified HF.1 and HF.2 to be Fusarium solani and Emericella nidulans; new isolates of anticancer producing fungi from Wady El-Natroon city in Egypt. Treatment with the two isolates caused P53 expression in Caco-2 cell line. These two isolates can be used as an anticancer agents.
Antineoplastic Agents ; chemistry ; pharmacology ; Caco-2 Cells ; Complex Mixtures ; chemistry ; pharmacology ; Egypt ; Emericella ; chemistry ; classification ; genetics ; isolation & purification ; Fusarium ; chemistry ; classification ; genetics ; isolation & purification ; Gene Expression ; drug effects ; Humans ; Phylogeny ; Soil Microbiology ; Tumor Suppressor Protein p53 ; genetics ; metabolism
10.Natural occurrence of masked deoxynivalenol and multi-mycotoxins in cereals from China harvested in 2007 and 2008.
Feng-qin LI ; Chuan-chuan YU ; Bing SHAO ; Wei WANG ; Hong-xia YU
Chinese Journal of Preventive Medicine 2011;45(1):57-63
OBJECTIVETo elucidate the natural occurrence of masked deoxynivalenol (DON-3-G) and other multi-mycotoxins in cereals from parts of China.
METHODSA total of 446 corn and wheat samples harvested in 2007 and 2008 collected from Henan, Hebei, Guangxi, Anhui, Sichuan, Chongqing and Jiangsu provinces were analyzed for DON-3-G and other multi-mycotoxins (including deoxynivalenol (DON), zearalenone (ZEN), nivalenol (NIV), et al) by UPLC-MS/MS.
RESULTSCorn and wheat samples were mainly contaminated by DON and its derivatives as well as ZEN.88% (169/192) of wheat samples were positive for DON (range: 1.5 - 590.7 µg/kg; median: 30.8 µg/kg); 22.9% (44/192) of wheat samples were contaminated with ZEN (range: 1.7 - 3425.0 µg/kg; median: 8.0 µg/kg) and six samples contained ZEN concentration higher than the ZEN tolerance limit of 60 µg/kg. DON was detected in 50.5% (103/204) corn samples (range: 1.6 - 4374.4 µg/kg; median: 94.9 µg/kg); Seven samples contained DON exceeding the tolerance limit of 1000 µg/kg for DON. Additionally, ZEN was found in 41.7% (85/204) corn samples with the concentration between 1.6 µg/kg and 4808.7 µg/kg (median: 48.5 µg/kg) and there were 37 corn samples with ZEN level in the excess of tolerance limit for ZEN (60 µg/kg). DON-3-G was detected in corn and wheat samples for the first time in China with the median level of 21.4 µg/kg and 34.6 µg/kg for wheat and corn, respectively. Wheat was more heavily contaminated with DON-3-G than both 3-acetyl-DON (3-A-DON, median: 4.1 µg/kg) and 15-acetyl-DON (15-A-DON, median: 3.1 µg/kg) (t values were 5.111 and 5.966, respectively, both P values < 0.01). While, the level of 15-A-DON (median: 48.6 µg/kg) in corn was higher than 3-A-DON (median: 6.8 µg/kg) (t = -3.579, P < 0.01). The concentration of DON, DON-3-G, 3-A-DON, 15-A-DON and ZEN in corn were higher than that in wheat (Z values were -3.492, -1.960, -2.467, -8.711 and -6.272, respectively, all P values < 0.05). Wheat (median: 29.0 µg/kg) contained higher NIV in comparison with corn (median: 18.2 µg/kg, Z = -2.086, P < 0.05).
CONCLUSIONWheat and corn samples from parts of China were contaminated with multi-mycotoxins and DON was the predominant;in comparison of wheat, corn was more heavily contaminated with DON, DON-3-G, 3-A-DON, 15-A-DON and ZEN.
China ; Edible Grain ; chemistry ; microbiology ; Food Contamination ; Food Microbiology ; Fusarium ; isolation & purification ; Mycotoxins ; isolation & purification ; Trichothecenes ; isolation & purification ; Triticum ; chemistry ; microbiology ; Zea mays ; chemistry ; microbiology


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