1.Genetic analysis and prenatal diagnosis for a Chinese pedigree affected with Bainbridge-Ropers syndrome.
Jingjing LI ; Jinghan XU ; Mingcong SHE ; Panlai SHI ; Xiangdong KONG ; Li WANG
Chinese Journal of Medical Genetics 2022;39(11):1228-1232
OBJECTIVE:
To explore the clinical features and genetic basis for a child with Bainbridge-Ropers syndrome (BRPS).
METHODS:
Clinical data of the child were retrospectively analyzed. Copy number variation sequencing (CNV-seq) and trio based whole exome sequencing (trio-WES) were carried out. Prenatal diagnosis was provided for a at risk fetus from the pedigree, and genotype phenotype correlation was summarized through a literature review.
RESULTS:
The proband, a 6-year-old boy, has presented with feeding difficulties, specific craniofacial features, global developmental delay and intellectual disability, which has not improved after rehabilitation treatment. CNV-seq analysis of the patient showed no obvious abnormalities. A de novo heterozygous truncating variation, c.1448dupT (p.T484Nfs*5), was identified in the ASXL3 gene by trio-WES, which was a previously reported pathogenic variant. So far 14 Chinese patients with BRPS and ASXL3 variants have been reported. All patients have shown specific craniofacial features and delayed motor and speech development, and harbored 12 loss of function ASXL3 variants, which were de novo in origin and have clustered in exons 11 and 12 of the ASXL3 gene.
CONCLUSION
The heterozygous frameshift c.1448dupT (p.T484Nfs*5) variant of the ASXL3 gene probably underlay the disorder in this patient. BRPS should be considered in infants with feeding difficulties, special craniofacial features, global developmental delay and hand anomalies, and WES can help to delineate the pathogenesis and establish the definite diagnosis.
Child
;
Humans
;
Female
;
Pregnancy
;
Developmental Disabilities/genetics*
;
Phenotype
;
Pedigree
;
DNA Copy Number Variations
;
Retrospective Studies
;
Transcription Factors/genetics*
;
Syndrome
;
Intellectual Disability/genetics*
;
Prenatal Diagnosis
;
China
2.Recurrent vulvar rashes in a girl aged 22 months for more than half a year.
Ke-Yao LI ; Jian-Ping TANG ; Yan-Ling JIANG ; Xin TAN ; Zhu WEI ; Rong WEN ; Bin ZHOU
Chinese Journal of Contemporary Pediatrics 2021;23(1):98-102
A girl, aged 22 months, attended the hospital due to recurrent vulvar rashes for more than half a year. Skin biopsy showed Langerhans cell histiocytosis, and evaluation of systemic conditions showed no systemic involvement. Therefore, the girl was diagnosed with Langerhans cell histiocytosis (skin type). In conclusion, for rashes on the vulva alone, if there are no specific clinical manifestations, the possibility of Langerhans cell histiocytosis should be considered after molluscum contagiosum, sexually transmitted diseases, and Fordyce disease are excluded.
Developmental Disabilities
;
Exanthema/etiology*
;
Female
;
Histiocytosis, Langerhans-Cell
;
Humans
;
Infant
;
Vulvar Diseases/diagnosis*
3.Molecular genetic analysis of a child with de novo 16p11.2 microdeletion.
Jianlong ZHUANG ; Yuanbai WANG ; Shuhong ZENG ; Junyu WANG ; Yuying JIANG
Chinese Journal of Medical Genetics 2020;37(11):1283-1286
OBJECTIVE:
To explore the genetic basis for a child featuring developmental delay, intelligent disability and language deficit.
METHODS:
Peripheral blood samples of the child and her parents were collected for routine G-banding karyotyping analysis and single nucleotide polymorphism array (SNP array) detection. Amniotic fluid was also sampled from the mother for karyotyping analysis and SNP array detection.
RESULTS:
No karyotypic abnormality was found with the child and her parents. SNP array showed that the child has carried a 761.4 kb microdeletion at 16p11.2, while her mother has carried a 444.4 kb microduplication at 15q13.3. Her father's result was negative. Further analysis showed that the 15q13.3 microduplication was inherited from her maternal grandfather who was phenotypically normal. Prenatal diagnosis showed that the fetus has inherited the15q13.3 microduplication from its mother.
CONCLUSION
The child has carried a de novo 16p11.2 microdeletion, which overlaps with 16p11.2 microdeletion syndrome region, in addition with similar clinical phenotypes. The 16p11.2 microdeletion probably underlies her abnormal phenotype.
Child
;
Chromosome Banding
;
Chromosome Deletion
;
Chromosomes, Human, Pair 16
;
Developmental Disabilities/genetics*
;
Female
;
Fetus
;
Humans
;
Karyotyping
;
Polymorphism, Single Nucleotide
;
Pregnancy
;
Prenatal Diagnosis
4.Clinical Usefulness of the Korean Developmental Screening Test (K-DST) for Developmental Delays
Chul Hoon JANG ; Seong Woo KIM ; Ha Ra JEON ; Da Wa JUNG ; Han Eol CHO ; Jiyong KIM ; Jang Woo LEE
Annals of Rehabilitation Medicine 2019;43(4):490-496
OBJECTIVE: To evaluate the clinical usefulness of the Korean Developmental Screening Test (K-DST) via comparison with Korean Ages and Stages Questionnaire (K-ASQ) for the diagnosis of developmental delay in pediatric patients. METHODS: The K-DST and K-ASQ were used to screen pediatric patients who visited the hospital for evaluation and diagnosis of delayed development. Korean Bayley Scales of Infant Development-II (K-BSID-II) or Korean Wechsler Preschool and Primary Scale of Intelligence III (K-WPPSI-III) were used for the standardized assessment. Moreover, the final clinical diagnosis was confirmed by three expert physicians (rehabilitation doctor, psychiatrist, and neurologist). The sensitivity and specificity of each screening tool for the final diagnosis were investigated and correlated with standardized assessments. RESULTS: A total of 145 pediatric consultations were conducted, which included 123 developmental disorders (40 autism spectrum disorders, 46 global developmental delay/intellectual disability, and 37 developmental language disorders) and another 22 that were not associated with any such disorders. The sensitivity and specificity of K-DST based on the final clinical diagnosis were 82.9% and 90.9%, respectively, which were not significantly different from that of K-ASQ (83.7% and 77.3%). Both K-DST and K-ASQ showed good correlation with K-BSID-II and K-WPPSI-III. No significant difference was found between the K-DST and K-ASQ measures. CONCLUSION: K-DST is an excellent screening tool and is expected to replace K-ASQ with high validity.
Autism Spectrum Disorder
;
Communication Disorders
;
Developmental Disabilities
;
Diagnosis
;
Humans
;
Infant
;
Intellectual Disability
;
Intelligence
;
Mass Screening
;
Motor Skills Disorders
;
Psychiatry
;
Referral and Consultation
;
Sensitivity and Specificity
;
Weights and Measures
5.Developmental delay: identification and management at primary care level.
Ying Ying CHOO ; Pratibha AGARWAL ; Choon How HOW ; Sita Padmini YELESWARAPU
Singapore medical journal 2019;60(3):119-123
Developmental delays are common in childhood, occurring in 10%-15% of preschool children. Global developmental delays are less common, occurring in 1%-3% of preschool children. Developmental delays are identified during routine checks by the primary care physician or when the parent or preschool raises concerns. Assessment for developmental delay in primary care settings should include a general and systemic examination, including plotting growth centiles, hearing and vision assessment, baseline blood tests if deemed necessary, referral to a developmental paediatrician, and counselling the parents. It is important to follow up with the parents at the earliest opportunity to ensure that the referral has been activated. For children with mild developmental delays, in the absence of any red flags for development and no abnormal findings on clinical examination, advice on appropriate stimulation activities can be provided and a review conducted in three months' time.
Child
;
Child, Preschool
;
Developmental Disabilities
;
diagnosis
;
therapy
;
Female
;
Humans
;
Male
;
Mass Screening
;
methods
;
Parents
;
Pediatrics
;
methods
;
Physical Examination
;
Physician-Patient Relations
;
Primary Health Care
;
organization & administration
;
Referral and Consultation
;
Singapore
6.Developmental assessment: practice tips for primary care physicians.
Ying Ying CHOO ; Sita Padmini YELESWARAPU ; Choon How HOW ; Pratibha AGARWAL
Singapore medical journal 2019;60(2):57-62
Child development refers to the continuous but predictably sequential biological, psychological and emotional changes that occur in human beings between birth and the end of adolescence. Developmental surveillance should be incorporated into every child visit. Parents play an important role in the child's developmental assessment. The primary care physician should educate and encourage parents to use the developmental checklist in the health booklet to monitor their child's development. Further evaluation is necessary when developmental delay is identified. This article aimed to highlight the normal child developmental assessment as well as to provide suggestions for screening tools and questions to be used within the primary care setting.
Adolescent
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Checklist
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Child
;
Child Development
;
Child, Preschool
;
Developmental Disabilities
;
diagnosis
;
Female
;
Health Knowledge, Attitudes, Practice
;
Humans
;
Infant
;
Infant, Newborn
;
Male
;
Parent-Child Relations
;
Parents
;
psychology
;
Physicians, Primary Care
;
psychology
;
Primary Health Care
;
Professional-Family Relations
;
Singapore
7.Early Diagnosis of KBG Syndrome Using Diagnostic Exome Sequencing.
Jun Ho HONG ; Se Hee KIM ; Seung Tae LEE ; Jong Rak CHOI ; Hoon Chul KANG ; Joon Soo LEE ; Heung Dong KIM
Journal of the Korean Child Neurology Society 2018;26(4):272-275
KBG syndrome is a rare neurodevelopmental disorder characterized by intellectual disability, skeletal anomalies, short stature, craniofacial dysmorphism, and macrodontia. ANKRD11 gene mutation and 16q24.3 microdeletion have been reported to cause KBG syndrome. Here, we report two patients with ANKRD11 mutations who initially presented with neurologic symptoms such as developmental delay and seizures. Patient 1 was a 23-month-old boy who presented with a global developmental delay. Language delay was the most dominant feature. He had hypertelorism, hearing impairment, and behavior problems characterized as hyperactivity. A c.1903_1907delAAACA (p.Lys635GInfsTer26) mutation in ANKRD11 was identified with diagnostic exome sequencing. Patient 2 was a 14-month-old boy with developmental delay and seizure. He also had atrial septum defect, and ventricular septal defect. Generalized tonic seizures began at the age of 8 months. Electroencephalography showed generalized sharp and slow wave pattern. Seizures did not respond to antiepileptic drugs. A loss of function mutation c.5350_5351delTC (p.ser1784HisfsTer12) in ANKRD11 was identified with diagnostic exome sequencing. In both cases, characteristic features of KBG syndrome such as short stature or macrodontia, were absent, and they visited the hospital due to neurological symptoms. These findings suggest that more patients with mild phenotypes of KBG syndrome are being recognized with advances in diagnostic exome sequencing genetic technologies.
Anticonvulsants
;
Atrial Septum
;
Developmental Disabilities
;
Early Diagnosis*
;
Electroencephalography
;
Exome*
;
Hearing Loss
;
Heart Septal Defects, Ventricular
;
Humans
;
Hypertelorism
;
Infant
;
Intellectual Disability
;
Language Development Disorders
;
Male
;
Neurodevelopmental Disorders
;
Neurologic Manifestations
;
Phenotype
;
Seizures
8.Psychomotor retardation with neutropenia for more than one year in a toddler.
Fan ZHANG ; Xiu-Yu SHI ; Li-Ying LIU ; Yu-Tian LIU ; Li-Ping ZOU
Chinese Journal of Contemporary Pediatrics 2018;20(6):497-500
A boy was admitted at the age of 17 months. He had psychomotor retardation in early infancy. Physical examination revealed microcephalus, unusual facies, and a single palmar crease on his right hand, as well as muscle hypotonia in the extremities and hyperextension of the bilateral shoulder and hip joints. Genetic detection identified two pathogenic compound heterozygous mutations, c.8868-1G>A (splicing) and c.11624_11625del (p.V3875Afs*10), in the VPS13B gene, and thus the boy was diagnosed with Cohen syndrome. Cohen syndrome is a rare autosomal recessive disorder caused by the VPS13B gene mutations and has complex clinical manifestations. Its clinical features include microcephalus, unusual facies, neutropenia, and joint hyperextension. VPS13B gene detection helps to make a confirmed diagnosis.
Base Sequence
;
Developmental Disabilities
;
diagnosis
;
genetics
;
Fingers
;
abnormalities
;
Humans
;
Infant
;
Intellectual Disability
;
diagnosis
;
genetics
;
Male
;
Microcephaly
;
diagnosis
;
genetics
;
Muscle Hypotonia
;
diagnosis
;
genetics
;
Mutation
;
Myopia
;
diagnosis
;
genetics
;
Neutropenia
;
complications
;
genetics
;
psychology
;
Obesity
;
diagnosis
;
genetics
;
Psychomotor Disorders
;
diagnosis
;
etiology
;
genetics
;
Retinal Degeneration
;
diagnosis
;
genetics
;
Vesicular Transport Proteins
;
genetics
9.Application of SNP-array technology in the genetic analysis of pediatric patients with growth retardation.
Shiyu LUO ; Chunyun FU ; Shujie ZHANG ; Jin WANG ; Xin FAN ; Jingsi LUO ; Rongyu CHEN ; Xuyun HU ; Haisong QIN ; Chuan LI ; Shan OU ; Qifei LI ; Shaoke CHEN
Chinese Journal of Medical Genetics 2017;34(3):321-326
OBJECTIVETo explore the value of single nucleotide polymorphism array (SNP-array) for the analysis of pediatric patients with growth retardation.
METHODSOne hundred eighty one children with growth retardation were enrolled. DNA was extracted from peripheral samples from the patients, and whole genome copy number variations (CNVs) were detected using Illumina Human Cyto SNP-12. All identified CNVs were further analyzed with reference to databases including ClinGen, ClinVar, DECIPHER, OMIM and DGV as well as comprehensive review of literature from PubMed to determine their pathogenicity.
RESULTSForty seven patients (26%) with abnormal CNVs were detected, which included 12 known microdeletions/microduplications syndrome (26%), 10 pathogenic non-syndromic CNVs (21%), 3 numerical chromosome aberrations (6%), 3 unbalanced translocations (6%), 4 pathogenic mosaicisms (9%) and 15 cases with unknown clinical significance (32%). After excluding obvious numerical and/or structural chromosomal abnormalities, this study has detected 15 pathogenic microdeletions/microduplications sized 5 Mb or less, which may be missed by routine chromosomal karyotyping. In addition, there were 3 cases with loss of heterozygoisty (LOH) containing known or predicted imprinting genes as well as 2 cases with suspected parental consanguinity.
CONCLUSIONSNP-array technology is a powerful tool for the genetic diagnosis of children with growth disorders with advantages of high resolution and improved accuracy.
Adolescent ; Child ; Child, Preschool ; Chromosome Aberrations ; DNA Copy Number Variations ; Developmental Disabilities ; diagnosis ; genetics ; Female ; Humans ; Infant ; Karyotyping ; Male ; Oligonucleotide Array Sequence Analysis ; methods ; Polymorphism, Single Nucleotide
10.Unusual facies with delayed development and multiple malformations in a 14-month-old boy.
Chinese Journal of Contemporary Pediatrics 2017;19(8):921-925
Schinzel-Giedion syndrome is a rare autosomal dominant genetic disease and has the clinical features of severe delayed development, unusual facies, and multiple congenital malformations. In this case report, a 14-month-old boy had the clinical manifestations of delayed development, unusual facies (prominent forehead, midface retraction, hypertelorism, low-set ears, upturned nose, and micrognathia), and multiple congenital malformations (including cerebral dysplasia, dislocation of the hip joint, and cryptorchidism). The karyotype analysis and copy number variations showed no abnormalities, and whole exon sequencing showed a de novo heterozygous missense mutation, c.2602G > A (p. D868N), in SETBP1 gene. Therefore, the boy was diagnosed with Schinzel-Giedion syndrome. Myoclonic seizures in this boy were well controlled by sodium valproate treatment, and his language development was also improved after rehabilitation treatment. Clinical physicians should improve their ability to recognize such rare diseases, and Schinzel-Giedion syndrome should be considered for children with unusual facies, delayed development, and multiple malformations. Gene detection may help with the diagnosis of this disease.
Abnormalities, Multiple
;
diagnosis
;
genetics
;
Craniofacial Abnormalities
;
diagnosis
;
genetics
;
Developmental Disabilities
;
diagnosis
;
Face
;
abnormalities
;
Hand Deformities, Congenital
;
diagnosis
;
genetics
;
Humans
;
Infant
;
Intellectual Disability
;
diagnosis
;
genetics
;
Male
;
Nails, Malformed
;
diagnosis
;
genetics

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