1.Transcriptome and Regulatory Network Analyses of CD19-CAR-T Immunotherapy for B-ALL.
Qiong ZHANG ; Hui HU ; Si-Yi CHEN ; Chun-Jie LIU ; Fei-Fei HU ; Jianming YU ; Yaohui WU ; An-Yuan GUO
Genomics, Proteomics & Bioinformatics 2019;17(2):190-200
Chimeric antigen receptor (CAR) T cell therapy has exhibited dramatic anti-tumor efficacy in clinical trials. In this study, we reported the transcriptome profiles of bone marrow cells in four B cell acute lymphoblastic leukemia (B-ALL) patients before and after CD19-specific CAR-T therapy. CD19-CAR-T therapy remarkably reduced the number of leukemia cells, and three patients achieved bone marrow remission (minimal residual disease negative). The efficacy of CD19-CAR-T therapy on B-ALL was positively correlated with the abundance of CAR and immune cell subpopulations, e.g., CD8 T cells and natural killer (NK) cells, in the bone marrow. Additionally, CD19-CAR-T therapy mainly influenced the expression of genes linked to cell cycle and immune response pathways, including the NK cell mediated cytotoxicity and NOD-like receptor signaling pathways. The regulatory network analyses revealed that microRNAs (e.g., miR-148a-3p and miR-375), acting as oncogenes or tumor suppressors, could regulate the crosstalk between the genes encoding transcription factors (TFs; e.g., JUN and FOS) and histones (e.g., HIST1H4A and HIST2H4A) involved in CD19-CAR-T therapy. Furthermore, many long non-coding RNAs showed a high degree of co-expression with TFs or histones (e.g., FOS and HIST1H4B) and were associated with immune processes. These transcriptome analyses provided important clues for further understanding the gene expression and related mechanisms underlying the efficacy of CAR-T immunotherapy.
Adult
;
Antigens, CD19
;
metabolism
;
Bone Marrow
;
metabolism
;
CD8-Positive T-Lymphocytes
;
immunology
;
Female
;
Gene Expression Regulation, Leukemic
;
Gene Regulatory Networks
;
Humans
;
Immunotherapy, Adoptive
;
Male
;
MicroRNAs
;
genetics
;
metabolism
;
Middle Aged
;
Precursor Cell Lymphoblastic Leukemia-Lymphoma
;
genetics
;
immunology
;
therapy
;
RNA, Long Noncoding
;
genetics
;
metabolism
;
Receptors, Antigen, T-Cell
;
Transcription Factors
;
metabolism
;
Transcriptome
;
genetics
2.Familial Hemophagocytic Lymphohistiocytosis Type 2 in a Korean Infant With Compound Heterozygous PRF1 Defects Involving a PRF1 Mutation, c.1091T>G.
Min Sun KIM ; Young Uk CHO ; Seongsoo JANG ; Eul Ju SEO ; Ho Joon IM ; Chan Jeoung PARK
Annals of Laboratory Medicine 2017;37(2):162-165
No abstract available.
Asian Continental Ancestry Group/*genetics
;
Base Sequence
;
Bone Marrow Cells/cytology/pathology
;
Cytomegalovirus Infections/diagnosis
;
Epstein-Barr Virus Infections/diagnosis
;
Female
;
Flow Cytometry
;
Heterozygote
;
Humans
;
Infant
;
Killer Cells, Natural/cytology/immunology
;
Lymphohistiocytosis, Hemophagocytic/*diagnosis/genetics
;
Perforin/*genetics
;
Phagocytosis
;
Polymorphism, Single Nucleotide
;
Republic of Korea
;
Sequence Analysis, DNA
3.Bone Marrow Suppression and Hemophagocytic Histiocytes Are Common Findings in Korean Severe Fever with Thrombocytopenia Syndrome Patients.
Sang Yong SHIN ; Oh Hyun CHO ; In Gyu BAE
Yonsei Medical Journal 2016;57(5):1286-1289
The causes of cytopenia in patients with severe fever with thrombocytopenia syndrome (SFTS) are not fully understood until now. We reviewed the bone marrow (BM) findings of patients with SFTS to unravel the cause of the cytopenia. Three Korean SFTS were enrolled in this study. Thrombocytopenia, neutropenia, and anemia were detected in all three patients. Severe hypocellular marrow (overall cellularity <5%) and a decreased number of megakaryocytes were noted in one patient, and hypo-/normocellular marrow and an increased number of hemophagocytic histiocytes were observed in two patients. Megakaryocytes were relatively preserved in two patients. Although a limited number of cases are available, our observations suggest that both BM suppression and peripheral destruction or sequestration are causes of cytopenia of patients with SFTS. To the best of our knowledge, this is the first well documented pathologic evaluation of Korean SFTS.
Aged
;
Aged, 80 and over
;
Bone Marrow/*pathology
;
Female
;
Fever/*complications
;
Histiocytes/*pathology
;
Humans
;
Male
;
Middle Aged
;
Neutropenia/complications
;
Pancytopenia/complications
;
Syndrome
;
Thrombocytopenia/*complications/*immunology
4.Thirty Years of Bone Marrow Transplantation in the Singapore General Hospital.
Colin PHIPPS ; Aloysius Yl HO ; Yeh Ching LINN ; Sathish GOPALAKRISHNAN ; Ai Leen ANG ; Jing Jing LEE ; Hong Yen NG ; Francesca Wi LIM ; Priscilla Sm GOH ; Yvonne Sm LOH ; Patrick Hc TAN ; Liang Piu KOH ; Mickey Bc KOH ; Lai Heng LEE ; Yeow Tee GOH ; Yong Wan ONG ; William Yk HWANG
Annals of the Academy of Medicine, Singapore 2016;45(7):315-317
Bone Marrow Transplantation
;
history
;
methods
;
HLA Antigens
;
immunology
;
Hematopoietic Stem Cell Transplantation
;
history
;
methods
;
History, 20th Century
;
History, 21st Century
;
Hospitals, General
;
Humans
;
Peripheral Blood Stem Cell Transplantation
;
history
;
methods
;
Singapore
;
Transplantation Conditioning
;
history
;
methods
5.Bone Marrow Flow Cytometry in Staging of Patients With B-cell Non-Hodgkin Lymphoma.
Borahm KIM ; Seung Tae LEE ; Hee Jin KIM ; Sun Hee KIM
Annals of Laboratory Medicine 2015;35(2):187-193
BACKGROUND: Bone marrow biopsies are routinely performed for staging patients with B-cell non-Hodgkin lymphoma (NHL). In addition to histomorphological studies, ancillary tools may be needed for accurate diagnosis. We investigated the clinical utility of multiparameter flow cytometric examination of bone marrow aspirates. METHODS: A total of 248 bone marrow specimens from 232 patients diagnosed with B-cell NHL were examined. Monoclonal antibodies directed against CD19, CD20, CD10 (or CD5), and kappa and lambda immunoglobulins were used. Multi-stage sequential gating was performed to select specific cells of interest, and the results were compared with bone marrow histology. RESULTS: The concordance rate between histomorphology and flow cytometry was 91.5% (n=227). Eight cases (3.2%) were detected by flow cytometry alone and were missed by histomorphology analysis, and 6 of these 8 cases showed minimal bone marrow involvement (0.09-2.2%). The diagnosis in these cases included large cell lymphoma (n=3), mantle cell lymphoma (n=3), and mucosa-associated lymphoid tissue (MALT) lymphoma (n=2). Thirteen cases were histopathologically positive and immunophenotypically negative, and the diagnoses in these cases included diffuse large cell lymphoma (n=7), T-cell/histiocyte-rich large B-cell lymphoma (n=2), anaplastic lymphoma kinase (ALK)-positive large B-cell lymphoma (n=1), follicular lymphoma (n=1), MALT lymphoma (n=1), and unclassifiable lymphoma (n=1). CONCLUSIONS: Multi-color flow cytometry can be a useful method for assessing bone marrow in staging NHL and also plays a complementary role, especially in detecting small numbers of lymphoma cells.
Antibodies, Monoclonal/immunology
;
Antigens, CD19/immunology/metabolism
;
Antigens, CD20/immunology/metabolism
;
Bone Marrow/*pathology
;
Female
;
Flow Cytometry
;
Humans
;
Immunophenotyping
;
Lymphoma, B-Cell/*pathology
;
Male
;
Neoplasm Staging
;
Neprilysin/immunology/metabolism
6.Defectiveness of bone marrow mesenchymal stem cells in acquired aplastic anemia.
Jing-Liao ZHANG ; Xiao-Fan ZHU
Chinese Journal of Contemporary Pediatrics 2015;17(1):100-106
The defectiveness of bone marrow mesenchymal stem cells (BM-MSCs) in acquired aplastic anemia (AA) has been a frequent research topic in recent years. This review summarizes the defectiveness of BM-MSCs which is responsible for the mechanism of acquired AA and the prospective application of BM-MSCs in the treatment of acquired AA. An increasingly number of laboratory statistics has demonstrated that the defectiveness of BM-MSCs is more likely to play an important role in the pathogenesis of AA, namely, the apparently different biological characteristics and gene expression profiles, the decreased ability of supporting hematopoiesis as well as self-renewal and differentiation, and the exhaustion of regulating immune response of hematopoietic environment. Those abnormalities continuously prompt AA to become irreversible bone marrow failure along with the imbalanced immunity. With deepening research on MSCs, infusion of MSCs for the primary purpose of recovering hematopoietic microenvironment may become a new approach for the treatment of AA.
Anemia, Aplastic
;
etiology
;
immunology
;
therapy
;
Bone Marrow
;
Cell Differentiation
;
Cell Proliferation
;
Cytokines
;
analysis
;
Humans
;
Lymphocyte Activation
;
Mesenchymal Stem Cell Transplantation
;
Mesenchymal Stromal Cells
;
physiology
;
T-Lymphocytes, Regulatory
;
immunology
7.First Report on Familial Hemophagocytic Lymphohistiocytosis with an Abnormal Immunophenotype and T Cell Monoclonality in Korea.
Sang Yong SHIN ; Kyunghoon LEE ; Mi Ae JANG ; Seung Tae LEE ; Keon Hee YOO ; Hong Hoe KOO ; Dae Shick KIM ; Hee Jin KIM ; Sun Hee KIM
Annals of Laboratory Medicine 2015;35(1):155-158
No abstract available.
Bone Marrow/metabolism/pathology
;
DNA Mutational Analysis
;
Gene Rearrangement, T-Lymphocyte
;
Humans
;
Immunophenotyping
;
Infant
;
Lymphohistiocytosis, Hemophagocytic/*diagnosis
;
Male
;
Membrane Proteins/chemistry/genetics
;
Polymorphism, Single-Stranded Conformational
;
Republic of Korea
;
T-Lymphocytes/immunology/*metabolism
8.The First Case Report of Composite Bone Marrow Involvement by Simultaneously Developed Peripheral T-Cell Lymphoma, Not Otherwise Specified, and Diffuse Large B-Cell Lymphoma.
Hyun Ki KIM ; Chan Jeoung PARK ; Seongsoo JANG ; Young Uk CHO ; Sang Hyuk PARK ; Jene CHOI ; Chan Sik PARK ; Jooryung HUH ; Young Hwa CHUNG ; Jung Hee LEE
Annals of Laboratory Medicine 2015;35(1):152-154
No abstract available.
Antibodies, Monoclonal, Murine-Derived/therapeutic use
;
Antineoplastic Combined Chemotherapy Protocols/therapeutic use
;
B-Cell-Specific Activator Protein/metabolism
;
Bone Marrow/metabolism/*pathology
;
Cyclophosphamide/therapeutic use
;
Doxorubicin/therapeutic use
;
Endoscopy, Digestive System
;
Female
;
Gene Rearrangement, gamma-Chain T-Cell Antigen Receptor
;
Genetic Loci
;
Humans
;
Liver/metabolism/pathology
;
Lymphocytes/cytology/immunology
;
Lymphoma, Large B-Cell, Diffuse/complications/*diagnosis/drug therapy
;
Lymphoma, T-Cell, Peripheral/complications/*diagnosis/drug therapy
;
Middle Aged
;
Prednisone/therapeutic use
;
Receptors, Antigen, T-Cell, gamma-delta/genetics
;
Tomography, X-Ray Computed
;
Vincristine/therapeutic use
9.Effects of dendritic cell-activated and cytokine-induced killer cell therapy on 22 children with acute myeloid leukemia after chemotherapy.
Yan BAI ; Jin-e ZHENG ; Nan WANG ; He-hua CAI ; Li-na ZHAI ; Yao-hui WU ; Fang WANG ; Run-ming JIN ; Dong-feng ZHOU
Journal of Huazhong University of Science and Technology (Medical Sciences) 2015;35(5):689-693
The efficiency of dendritic cell-activated and cytokine-induced killer cell (DC-CIK) therapy on children with acute myeloid leukemia (AML) after chemotherapy was investigated. Mononuclear cells were collected from children achieving complete remission after chemotherapy, cultured in vitro and transfused back into the same patient. Interleukin-2 (IL-2) was injected subcutaneously every other day 10 times at the dose of 1 × 10(6) units. Peripheral blood lymphocyte subsets and minimal residual disease (MRD) were detected by flow cytometry. Function of bone marrow was monitored by methods of morphology, immunology, cytogenetics and molecular biology. The side effects were also observed during the treatment. The average follow-up period for all the 22 patients was 71 months and relapse occurred in two AML patients (9.1%). The percentage of CD3(+)/CD8(+) cells in peripheral blood of 15 patients at the 3rd month after DC-CIK treatment (36.73% ± 12.51%) was dramatically higher than that before treatment (29.20% ± 8.34%, P < 0.05). The MRD rate was >0.1% in 5 patients before the treatment, and became lower than 0.1% 3 months after the treatment. During the transfusion of DC-CIK, side effects including fever, chills and hives appeared in 7 out of 22 (31.82%) cases but disappeared quickly after symptomatic treatments. There were no changes in electrocardiography and liver-renal functions after the treatment. MRD in children with AML can be eliminated by DC-CIK therapy which is safe and has fewer side effects.
Adolescent
;
Antineoplastic Agents
;
therapeutic use
;
Bone Marrow
;
drug effects
;
immunology
;
pathology
;
Child
;
Child, Preschool
;
Cytokine-Induced Killer Cells
;
cytology
;
immunology
;
transplantation
;
Dendritic Cells
;
cytology
;
immunology
;
transplantation
;
Female
;
Humans
;
Immunotherapy, Adoptive
;
methods
;
Injections, Subcutaneous
;
Interleukin-2
;
therapeutic use
;
Leukemia, Myeloid, Acute
;
immunology
;
pathology
;
therapy
;
Male
;
Neoplasm, Residual
;
Primary Cell Culture
;
Recurrence
;
Remission Induction
;
Treatment Outcome

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