1.Determination of plasma protein binding rate of arctiin and arctigenin with ultrafiltration.
Xue-Ying HAN ; Wei WANG ; Ri-Qiu TAN ; De-Qiang DOU
China Journal of Chinese Materia Medica 2013;38(3):432-434
OBJECTIVETo determine the plasma protein binding rate of arctiin and arctigenin.
METHODThe ultrafiltration combined with HPLC was employed to determine the plasma protein binding rate of arctiin and arctigenin as well as rat plasma and healthy human plasma proteins.
RESULTThe plasma protein binding rate of arctiin with rat plasma at the concentrations of 64. 29, 32.14, 16.07 mg x L(-1) were (71.2 +/- 2.0)%, (73.4 +/- 0.61)%, (78.2 +/- 1.9)%, respectively; while the plasma protein binding rate of arctiin with healthy human plasma at the above concentrations were (64.8 +/- 3.1)%, (64.5 +/- 2.5)%, (77.5 +/- 1.7)%, respectively. The plasma protein binding rate of arctigenin with rat plasma at the concentrations of 77.42, 38.71, 19.36 mg x L(-1) were (96.7 +/- 0.41)%, (96.8 +/- 1.6)%, (97.3 +/- 0.46)%, respectively; while the plasma protein binding rate of arctigenin with normal human plasma at the above concentrations were (94.7 +/- 3.1)%, (96.8 +/- 1.6)%, (97.9 +/- 1.3)%, respectively.
CONCLUSIONThe binding rate of arctiin with rat plasma protein was moderate, which is slightly higher than the binding rate of arctiin with healthy human plasma protein. The plasma protein binding rates of arctigenin with both rat plasma and healthy human plasma are very high.
Animals ; Binding, Competitive ; Blood Proteins ; metabolism ; Chromatography, High Pressure Liquid ; Furans ; metabolism ; Glucosides ; metabolism ; Humans ; Lignans ; metabolism ; Male ; Protein Binding ; Rats ; Rats, Sprague-Dawley ; Ultrafiltration ; methods
2.In vitro evolutional selection of a combinatorial phage library displaying randomly-rearranged various binding domains of SpA and SpG with four human IgG subclasses.
Peipei QI ; Yingying DING ; Lili WU ; Qiuli CHEN ; Jinhong WANG ; Chao LIU ; Wenting LIAO ; Jing ZHANG ; Jie CAO ; Wei PAN
Chinese Journal of Biotechnology 2012;28(9):1093-1105
Protein A and protein G are two well-defined immunoglobulin (Ig)-binding proteins (IBPs), which show affinity for specific sites on Ig of mammalian hosts. Protein A and protein G contained several highly homologous IgG-binding domains which had been demonstrated to have function to bind to IgG. Whether combinations of Ig-binding domains of various IBPs could produce useful novel binding properties remains interesting. We constructed a combinatorial phage library which displayed randomly-rearranged A, B, C, D and E domains of protein A, B2 and B3 domains of protein G. Four rounds molecular evolution of this library directed by all four human IgG subclasses respectively generated a common arrangement of D-C respectively which didn't exist in SpA. The dynamic loss of control phages and increase of the phages displaying two or more binding domains, especially the selective enrichment of D-C and strict selection of its linking peptides demonstrated the efficient molecular evolutions and the significance of the selected D-C arrangement. The phage binding assays confirmed that D-C possessed a binding advantage with four human IgG subclasses compared to SpA. In this work, a novel combination of Ig-binding domains, D-C, was obtained and presented the novel Ig binding properties which provided a novel candidate molecule for the purification, production and detection of IgG antibodies and a new approach for the further study of structures and functions of IBPs.
Amino Acid Sequence
;
Antibody Specificity
;
Bacterial Proteins
;
immunology
;
metabolism
;
Binding Sites
;
Binding, Competitive
;
Evolution, Molecular
;
Immunoglobulin G
;
immunology
;
metabolism
;
Molecular Sequence Data
;
Peptide Library
;
Sequence Alignment
;
Staphylococcal Protein A
;
immunology
;
metabolism
3.Study of a novel compound 2460A with activities produced by fungus.
Xiao-qiang QI ; Feng-chang ZHU ; Yang ZHANG ; Lian-hong GUO ; Rong JIANG ; Qi-yang HE ; Yuan LI
Acta Pharmaceutica Sinica 2011;46(2):165-169
With IL-6R as target, a new compound 2460A was identified from fungus using HTS screening model. The taxonomics of the produced strain was confirmed to be Trichoderma hazianum rifai after sequencing analysis of rDNA-ITS (internal transcribed spacer). Results showed that this compound has a binding activity on IL-6R competed with IL-6, thus it is a new ligand of IL-6R originating from microbe. With MTT assay, the anti-tumor activities of 2460A were demonstrated on CM126 and HT-29 cell lines separately, the IC50 are 2.17 x 10(-5) mol x L(-1) and 1.8 x 10(-5) mol x L(-1) respectively. The compound affected lightly the HT-29 cell cycle at S phase. Studies for the anti-tumor activity of 2460A in vivo are in progress in our lab.
Antineoplastic Agents
;
isolation & purification
;
metabolism
;
pharmacology
;
Binding, Competitive
;
Bone Marrow Neoplasms
;
pathology
;
Cell Cycle
;
drug effects
;
Cell Line, Tumor
;
Cell Proliferation
;
drug effects
;
HT29 Cells
;
High-Throughput Screening Assays
;
Humans
;
Interleukin-6
;
metabolism
;
Ligands
;
Receptors, Interleukin-6
;
metabolism
;
Trichoderma
;
chemistry
4.Erlotinib (Tarceva(R)) Induced Hair Abnormalities.
Chang Min CHOI ; Bark Lynn LEW ; Woo Young SIM
Korean Journal of Dermatology 2011;49(4):382-384
Erlotinib is a low-molecular-weight quinazoline derivative that inhibits the activation of epidermal growth factor receptor (EGFR) tyrosine kinase through competitive binding of the adenosine triphosphate binding domain of the receptor. Patients undergoing anti-EGFR therapy frequently present with cutaneous reactions like a sterile follicular and pustular rash, xerosis, pruritus, paronychia, hair abnormalities and mucositis, which can cause serious discomfort and negatively affect the compliance with anti-EGFR therapy. We report here on an interesting case of hair abnormalities induced by erlotinib (Tarceva(R)) and this presented as eyelash lengthening and hair curling in a 62-year-old woman.
Adenosine Triphosphate
;
Binding, Competitive
;
Compliance
;
Exanthema
;
Female
;
Hair
;
Humans
;
Middle Aged
;
Mucositis
;
Paronychia
;
Polyphosphates
;
Protein-Tyrosine Kinases
;
Pruritus
;
Quinazolines
;
Receptor, Epidermal Growth Factor
;
Erlotinib Hydrochloride
5.Exploring the obscure profiles of pharmacological binding sites on voltage-gated sodium channels by BmK neurotoxins.
Zhi-Rui LIU ; Pin YE ; Yong-Hua JI
Protein & Cell 2011;2(6):437-444
Diverse subtypes of voltage-gated sodium channels (VGSCs) have been found throughout tissues of the brain, muscles and the heart. Neurotoxins extracted from the venom of the Asian scorpion Buthus martensi Karsch (BmK) act as sodium channel-specific modulators and have therefore been widely used to study VGSCs. α-type neurotoxins, named BmK I, BmK αIV and BmK abT, bind to receptor site-3 on VGSCs and can strongly prolong the inactivation phase of VGSCs. In contrast, β-type neurotoxins, named BmK AS, BmK AS-1, BmK IT and BmK IT2, occupy receptor site-4 on VGSCs and can suppress peak currents and hyperpolarize the activation kinetics of sodium channels. Accumulating evidence from binding assays of scorpion neurotoxins on VGSCs, however, indicate that pharmacological sensitivity of VGSC subtypes to different modulators is much more complex than that suggested by the simple α-type and β-type neurotoxin distinction. Exploring the mechanisms of possible dynamic interactions between site 3-/4-specific modulators and region- and/or species-specific subtypes of VGSCs would therefore greatly expand our understanding of the physiological and pharmacological properties of diverse VGSCs. In this review, we discuss the pharmacological and structural diversity of VGSCs as revealed by studies exploring the binding properties and cross-competitive binding of site 3- or site 4-specific modulators in VGSC subtypes in synaptosomes from distinct tissues of diverse species.
Animals
;
Binding Sites
;
Binding, Competitive
;
Brain
;
metabolism
;
Heart
;
physiology
;
Humans
;
Insect Proteins
;
antagonists & inhibitors
;
genetics
;
metabolism
;
Insecta
;
Ion Channel Gating
;
drug effects
;
physiology
;
Kinetics
;
Mammals
;
Muscles
;
metabolism
;
Neurotoxins
;
chemistry
;
classification
;
pharmacology
;
Protein Binding
;
Scorpions
;
chemistry
;
Sodium
;
metabolism
;
Sodium Channel Blockers
;
pharmacology
;
Sodium Channels
;
classification
;
genetics
;
metabolism
;
Synaptosomes
;
drug effects
;
metabolism
6.Interactions of complement proteins C1q and factor H with lipid A and Escherichia coli: further evidence that factor H regulates the classical complement pathway.
Lee Aun TAN ; Andrew C YANG ; Uday KISHORE ; Robert B SIM
Protein & Cell 2011;2(4):320-332
Proteins of the complement system are known to interact with many charged substances. We recently characterized binding of C1q and factor H to immobilized and liposomal anionic phospholipids. Factor H inhibited C1q binding to anionic phospholipids, suggesting a role for factor H in regulating activation of the complement classical pathway by anionic phospholipids. To extend this finding, we examined interactions of C1q and factor H with lipid A, a well-characterized activator of the classical pathway. We report that C1q and factor H both bind to immobilized lipid A, lipid A liposomes and intact Escherichia coli TG1. Factor H competes with C1q for binding to these targets. Furthermore, increasing the factor H: C1q molar ratio in serum diminished C4b fixation, indicating that factor H diminishes classical pathway activation. The recombinant forms of the Cterminal, globular heads of C1q A, B and C chains bound to lipid A and E. coli in a manner qualitatively similar to native C1q, confirming that C1q interacts with these targets via its globular head region. These observations reinforce our proposal that factor H has an additional complement regulatory role of down-regulating classical pathway activation in response to certain targets. This is distinct from its role as an alternative pathway down-regulator. We suggest that under physiological conditions, factor H may serve as a downregulator of bacterially-driven inflammatory responses, thereby fine-tuning and balancing the inflammatory response in infections with Gram-negative bacteria.
Binding, Competitive
;
immunology
;
Complement Activation
;
immunology
;
Complement C1q
;
chemistry
;
immunology
;
metabolism
;
Complement C4b
;
analysis
;
Complement Factor H
;
chemistry
;
immunology
;
metabolism
;
Complement Pathway, Classical
;
immunology
;
Escherichia coli
;
immunology
;
metabolism
;
Humans
;
Iodine Radioisotopes
;
Isotope Labeling
;
Lipid A
;
immunology
;
metabolism
;
Liposomes
;
immunology
;
metabolism
;
Protein Binding
;
immunology
;
Recombinant Proteins
;
chemistry
;
immunology
;
metabolism
;
Substrate Specificity
7.Screening and identification of CD13-binding peptides with phage display peptide library.
Yong ZHANG ; Yi LÜ ; Xu-feng ZHANG ; Liang YU ; Chang LIU ; Ni ZHANG ; Hao-hua WANG ; Zhen WAN ; Zhan-tao XIE ; Liang-shuo HU ; Han-xiang ZHAN
Journal of Southern Medical University 2010;30(4):827-830
OBJECTIVETo screen and identify the peptides that specifically bind to CD13 on monocytes.
METHODSThe phages capable of specific binding to CD13 were screened in the phage-displayed 12-peptide library. The affinity of the selected phages with CD13 was verified with enzyme-linked immunosorbent assay (ELISA). The sequences of the peptides bound to the phages were deduced according to the phage DNA sequences, and the functional peptides aligned using the BLASTP on the Website NCBI were synthesized. To analyze the biological function of the screened peptides, the location of the peptides bound to THP-1 cells was detected using immunofluorescence assay. The blocking effect of WM15 on the peptide binding to THP-1 cells was assessed by immunofluorescence assay.
RESULTSThe phages that specifically bound to CD13 were effectively enriched to approach saturation after 4 rounds of panning. The recovery rate in the fourth round was 30 times that in the first round. Twenty selected phages were verified by ELISA, and the signals of 10 phages were higher than the control. The sequences of the peptides P9 and P7 showed 83% and 100% identity with those of human cytomegalovirus (HCMV) UL38 and UL105, respectively. The peptides bound to the cell membrane of THP-1 cells as shown by immunofluorescence assay. The binding of the peptides P9 and P7 to THP-1 cells was blocked by CD13-specific monoclonal antibody WM15 at different levels.
CONCLUSIONTwo peptides (P7 and P9) that can specifically bind to CD13 have been screened successfully, and these two peptides show specific binding to CD13 on the membrane of THP-1 cells.
Amino Acid Sequence ; Binding, Competitive ; CD13 Antigens ; analysis ; metabolism ; Cell Line ; Humans ; Molecular Sequence Data ; Peptide Library ; Peptides ; metabolism ; Protein Binding
8.Development of Competitive ELISA for Detection of Avian Metapneumovirus Antibodies in Chicken.
Kang Seuk CHOI ; Jin Won KIM ; Eun Kyoung LEE ; Woo Jin JEON ; Mi Ja PARK ; Yeh Na LYOO ; Jun Hun KWON
Journal of Bacteriology and Virology 2010;40(3):131-143
Avian metapneumovirus (aMPV) causes an acute and highly contagious upper respiratory tract infection in turkeys and chickens. In this study, a competitive ELISA (C-ELISA) was developed for the detection of antibodies to aMPV in chicken sera and/or their egg yolks. This assay is based on the competitive binding of monoclonal antibody with serum antibodies to recombinant aMPV N protein expressed by a recombinant baculovirus. The C-ELISA showed specificity and sensitivity of 100% and 98.0%, respectively, when compared to the virus neutralization test. In specific pathogen-free chickens experimentally infected with aMPV SC1509 strain, the C-ELISA started to detect antibodies to aMPV as early as 5 days post infection from birds infected with aMPV, while a commercial ELISA kit detected first 10 days post infection. The C-ELISA was similar or superior to a commercial ELISA kit when serum and egg yolk samples collected from chickens on six outbreak farms were tested for diagnosis. The C-ELISA developed in the present work provides a short turnaround time and can be a useful diagnostic and screening tool for aMPV infection in the field.
Antibodies
;
Baculoviridae
;
Binding, Competitive
;
Birds
;
Chickens
;
Egg Yolk
;
Enzyme-Linked Immunosorbent Assay
;
Mass Screening
;
Metapneumovirus
;
Neutralization Tests
;
Respiratory Tract Infections
;
Sensitivity and Specificity
;
Sprains and Strains
;
Turkeys
;
Viruses
9.Specific interaction of hepatitis C virus glycoproteins with mannan binding lectin inhibits virus entry.
Kristelle S BROWN ; Michael J KEOGH ; Ania M OWSIANKA ; Richard ADAIR ; Arvind H PATEL ; James N ARNOLD ; Jonathan K BALL ; Robert B SIM ; Alexander W TARR ; Timothy P HICKLING
Protein & Cell 2010;1(7):664-674
Mannan-binding lectin (MBL) is a soluble innate immune protein that binds to glycosylated targets. MBL acts as an opsonin and activates complement, contributing to the destruction and clearance of infecting microorganisms. Hepatitis C virus (HCV) encodes two envelope glycoproteins E1 and E2, expressed as non-covalent E1/E2 heterodimers in the viral envelope. E1 and E2 are potential ligands for MBL. Here we describe an analysis of the interaction between HCV and MBL using recombinant soluble E2 ectodomain fragment, the full-length E1/E2 heterodimer, expressed in vitro, and assess the effect of this interaction on virus entry. A binding assay using antibody capture of full length E1/E2 heterodimers was used to demonstrate calcium dependent, saturating binding of MBL to HCV glycoproteins. Competition with various saccharides further confirmed that the interaction was via the lectin domain of MBL. MBL binds to E1/E2 representing a broad range of virus genotypes. MBL was shown to neutralize the entry into Huh-7 cells of HCV pseudoparticles (HCVpp) bearing E1/E2 from a wide range of genotypes. HCVpp were neutralized to varying degrees. MBL was also shown to neutralize an authentic cell culture infectious virus, strain JFH-1 (HCVcc). Furthermore, binding of MBL to E1/E2 was able to activate the complement system via MBL-associated serine protease 2. In conclusion, MBL interacts directly with HCV glycoproteins, which are present on the surface of the virion, resulting in neutralization of HCV particles.
Binding, Competitive
;
Glycosylation
;
Hepacivirus
;
genetics
;
pathogenicity
;
physiology
;
Humans
;
Mannose-Binding Lectin
;
metabolism
;
Mannose-Binding Protein-Associated Serine Proteases
;
metabolism
;
Monosaccharides
;
metabolism
;
Protein Binding
;
Protein Multimerization
;
Tumor Cells, Cultured
;
Viral Envelope Proteins
;
metabolism
;
Virion
;
pathogenicity
;
physiology
;
Virus Internalization
10.Surface-bound myeloperoxidase is a ligand for recognition of late apoptotic neutrophils by human lung surfactant proteins A and D.
Anne JÄKEL ; Howard CLARK ; Kenneth B M REID ; Robert B SIM
Protein & Cell 2010;1(6):563-572
Surfactant proteins A (SP-A) and D (SP-D), both members of the collectin family, play a well established role in apoptotic cell recognition and clearance. Recent in vitro data show that SP-A and SP-D interact with apoptotic neutrophils in a distinct manner. SP-A and SP-D bind in a Ca(2+)-dependent manner to viable and early apoptotic neutrophils whereas the much greater interaction with late apoptotic neutrophils is Ca(2+)-independent. Cell surface molecules on the apoptotic target cells responsible for these interactions had not been identified and this study was done to find candidate target molecules. Myeloperoxidase (MPO), a specific intracellular defense molecule of neutrophils that becomes exposed on the outside of the cell upon apoptosis, was identified by affinity purification, mass-spectrometry and western blotting as a novel binding molecule for SP-A and SP-D. To confirm its role in recognition, it was shown that purified immobilised MPO binds SP-A and SP-D, and that MPO is surface-exposed on late apoptotic neutrophils. SP-A and SP-D inhibit binding of an anti-MPO monoclonal Ab to late apoptotic cells. Fluorescence microscopy confirmed that anti-MPO mAb and SP-A/SP-D colocalise on late apoptotic neutrophils. Desmoplakin was identified as a further potential ligand for SP-A, and neutrophil defensin as a target for both proteins.
Apoptosis
;
Binding, Competitive
;
Fluorescent Antibody Technique, Indirect
;
Humans
;
Neutrophils
;
chemistry
;
cytology
;
metabolism
;
Peroxidase
;
isolation & purification
;
metabolism
;
Protein Binding
;
Pulmonary Surfactant-Associated Protein A
;
isolation & purification
;
metabolism
;
Pulmonary Surfactant-Associated Protein D
;
isolation & purification
;
metabolism

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