1.Detection and analysis of dynamic variant in a pedigree affected with spinocerebellar ataxia type 3.
Chen CHEN ; Xuechao ZHAO ; Xiangdong KONG
Chinese Journal of Medical Genetics 2020;37(12):1364-1367
OBJECTIVE:
To analyze the dynamic variant and clinical subtype of a pedigree affected with spinocerebellar ataxia (SCA) by using fluorescent-labeled primer combined with capillary electrophoresis.
METHODS:
Genomic DNA was extracted from 8 members including 6 patients and 2 healthy individuals from the pedigree. Six pairs of fluorescent-labeled primers were designed to screen pathological variants in association with common subtypes of SCA including SCA1, SCA2, SCA3, SCA6, SCA12 and SCA17.The PCR products were detected by capillary electrophoresis.
RESULTS:
The number of CAG repeats in the SCA3 gene of the proband were determined as 8 and 70, exceeded the normal range(12 to 40), which suggested a diagnosis of SCA3. The other five patients were all detected with abnormal CAG repeats in the SCA3 gene, while the two healthy individuals were determined to be within the normal range.
CONCLUSION
The abnormal expansion of CAG repeats in the SCA3 gene probably underlay the pathogenesis of the disease in this pedigree. Combined fluorescent-labeled primers PCR and capillary electrophoresis can detect dynamic variants among SCA patients with efficiency and accuracy.
Ataxin-3/genetics*
;
Genetic Variation
;
Humans
;
Machado-Joseph Disease/genetics*
;
Pedigree
;
Repressor Proteins/genetics*
;
Trinucleotide Repeats/genetics*
2.A pedigree affected with spinocerebellar ataxia type III.
Chinese Journal of Medical Genetics 2017;34(3):463-464
Adult
;
Ataxin-3
;
genetics
;
Female
;
Humans
;
Male
;
Middle Aged
;
Pedigree
;
Repressor Proteins
;
genetics
;
Spinocerebellar Ataxias
;
genetics
3.Subcellular localization of ataxin-3 and its effect on the morphology of cytoplasmic organoids.
Feifei WEI ; Han XIAO ; Zhiping HU ; Hainan ZHANG ; Chunyu WANG ; Heping DAI ; Jianguang TANG
Chinese Journal of Medical Genetics 2015;32(3):353-357
OBJECTIVETo explore the subcellular localization of ataxin-3 and the effect of polyglutamine (polyQ) expansion mutation on the morphology of mitochondrion, golgi apparatus and endoplasmic reticulum.
METHODSTransient transfection was employed to build cell models expressing wild-type or mutant ataxin-3 proteins. Indirect immunofluorescence was applied to identify markers of organelle membrane. The results were observed under a laser scanning confocal microscope.
RESULTSNo co-localization was observed for ataxin-3 protein and mitochondrial marker TOM20, but the percentage of cells with mitochondrial fragmentation has increased in cells expressing mutant ataxin-3 (P<0.05). No co-localization was observed for ataxin-3 protein and golgi marker GM130, and mutant ataxin-3 did not cause golgi fragmentation. Wide type and polyQ-expanded ataxin-3 both showed partial co-localization with ER marker calnexin. The latter showed more overlap with calnexin, and the overlapping signals were mostly located in the places where aggregates were situated.
CONCLUSIONPolyQ-expanded ataxin-3 protein may indirectly affect the integrity of mitochondria, but may cause no effect on the structure and functions of golgi apparatus. Endoplasmic reticulum may be another place where extended ataxin-3 protein can induce cytotoxicity in addition to the nucleus.
Ataxin-3 ; Cytoplasm ; genetics ; metabolism ; Endoplasmic Reticulum ; genetics ; metabolism ; HeLa Cells ; Humans ; Machado-Joseph Disease ; genetics ; metabolism ; Mitochondria ; genetics ; metabolism ; Nerve Tissue Proteins ; genetics ; metabolism ; Nuclear Proteins ; genetics ; metabolism ; Protein Transport ; Repressor Proteins ; genetics ; metabolism
4.Cloning and localization of A3IP -a novel protein that interacts with ataxin-3.
Feng-zhen HUANG ; Xuan HOU ; Guo WANG ; Fang CAI ; Hai-yan FANG ; Qian PAN ; Kun XIA ; Bei-sha TANG ; Hong JIANG
Chinese Journal of Medical Genetics 2013;30(4):394-398
OBJECTIVETo clone an A3IP gene and investigate its cellular and histological localization based on previous research which has identified part of A3IP sequence interacting with carboxyl-terminal of ataxin-3.
METHODSBioinformatic and Northern blotting were applied to clone the A3IP gene and detect the expression of its transcripts in various human tissues and brain regions. Western blotting and immunofluorescence staining were applied to detect expression of A3IP protein in cultured cells. Immunohistochemistry staining was applied to study the expression of A3IP protein in various human tissues and brain regions.
RESULTScDNA cloning of A3IP gene's reading frame and its sequence assembly were completed. Three transcripts (1 kb, 1.35 kb and 6 kb, respectively) of A3IP were found to express in various human tissues and brain regions. A3IP pEGFP expresses in cytoplasm of cultured COS-7 cells and various human tissues and brain regions including cerebral cortex, cerebellum, muscle, peripheral nerve, liver and kidney.
CONCLUSIONThe cloned A3IP gene encodes A3IP, a novel ataxin-3 interacting protein. Three transcripts of A3IP are expressed in various human tissues and brain regions. A3IP is a cytosolic protein.
Ataxin-3 ; Base Sequence ; Carrier Proteins ; genetics ; metabolism ; Cloning, Molecular ; Humans ; Molecular Sequence Data ; Nerve Tissue Proteins ; genetics ; metabolism ; Nuclear Proteins ; genetics ; metabolism ; Protein Binding ; Protein Transport ; Repressor Proteins ; genetics ; metabolism
5.Molecular and prenatal diagnosis of a pedigree with spinocerebellar ataxia.
Dong-hua CAO ; Mei-hong REN ; Xiao-li LIU ; Chun-lian JIN ; Zhao-yi MENG ; Guang-bin QIU
Chinese Journal of Medical Genetics 2010;27(3):320-323
OBJECTIVETo identify the type of a pedigree with spinocerebellar ataxia, and carry out asymptomatic carrier detection and prenatal diagnosis.
METHODSThe blood samples of two patients in the spinocerebellar ataxia pedigree were collected. Based on the clinical characteristics of the pedigree and the disease incidence in China, the regions containing the CAG repeat of the SCA1, SCA2 and SCA3/MJD genes were amplified by polymerase chain reaction (PCR). The numbers of CAG repeats in the normal and abnormal allele fragments were identified by using agarose gel electrophoresis and DNA sequencing. We further carried out tests on the children of the patients and fetus to identify the presence of the abnormal allele.
RESULTSThe numbers of CAG repeat in the SCA1 and SCA2 genes were in the normal range. The CAG repeat number in one allele of SCA3/MJD gene was in the normal range, while that in the other allele was in the abnormal range. One of the children of the patients and the fetus carried the abnormal allele.
CONCLUSIONIt was confirmed that the pedigree was SCA3/MJD by gene diagnosis. One of the children of the patients was asymptomatic carrier and the fetus also carried the abnormal allele.
Ataxin-3 ; Ataxins ; Female ; Genetic Predisposition to Disease ; Humans ; Male ; Middle Aged ; Nerve Tissue Proteins ; genetics ; Nuclear Proteins ; genetics ; Pedigree ; Polymerase Chain Reaction ; Pregnancy ; Prenatal Diagnosis ; methods ; Repressor Proteins ; genetics ; Spinocerebellar Ataxias ; genetics
6.Identification of ATXN3 intermedial allele associated with a disease phenotype in an SCA3 Han Chinese family.
Jia YU ; Jian-hua MA ; Xiao-ning ZHANG ; Jing LEI
Chinese Journal of Medical Genetics 2010;27(2):190-193
OBJECTIVETo investigate the clinical manifestation and the mutation characteristics of intermedial allele associated with a disease phenotype of a Machado-Joseph disease (MJD) family.
METHODSPolymerase chain reaction, capillary electrophoresis, molecular cloning and sequencing were performed to detect the ATXN3 gene in an spinocerebellar ataxia(SCA) family. The fragments of expanded alleles were subcloned into the pGEM-T plasmids and sequenced.
RESULTSThe expanded repeats at the MJD locus were confirmed by molecular technique. The proband had 43 CAG repeats at the MJD locus. He had two sons with 41 and 64 repeats in the expanded allele respectively.
CONCLUSIONA 43 CAG repeat allele was unstable upon inter-generational transmission. The change of the CAG repeat was bidirectional. This is the shortest expanded allele associated with a disease phenotype in the MJD gene reported to date. The identification of the MJD family has reduced the amplitude between the normal and expanded allele repeats.
Adult ; Alleles ; Asian Continental Ancestry Group ; ethnology ; genetics ; Ataxin-3 ; Base Sequence ; Ethnic Groups ; genetics ; Female ; Genetic Loci ; genetics ; Humans ; Machado-Joseph Disease ; genetics ; Male ; Middle Aged ; Molecular Sequence Data ; Mutation ; Nerve Tissue Proteins ; genetics ; Nuclear Proteins ; genetics ; Phenotype ; Repetitive Sequences, Nucleic Acid ; Repressor Proteins ; genetics
7.Polyglutamine-expanded ataxin-3 is degraded by autophagy.
Han XIAO ; Jianguang TANG ; Zhiping HU ; Jieqiong TAN ; Beisha TANG ; Zheng JIANG
Chinese Journal of Medical Genetics 2010;27(1):23-28
OBJECTIVETo investigate the role of autophagy on the pathogenesis of spinocerebellar ataxia 3/Machado-Joseph disease (SCA3/MJD).
METHODSHEK293 cells expressing polyglutamine-expanded ataxin-3 were used as cell model for SCA3/MJD. The level of polyglutamine-expanded ataxin-3 was detected after cells were treated with different inhibitors or inducer of autophagy.
RESULTSInhibition of autophagy increased aggregate formation and cell death in HEK293 cells expressing mutated ataxin-3, and vice versa.
CONCLUSIONThe data suggested that autophagy is involved in the degradation of mutant ataxin-3, resulting in a decrease in the proportions of aggregate-containing cells and cell death in HEK293 cells expressing polyglutamine-expanded ataxin-3. It is possible that autophagy may be applied as a potential therapeutic approach for SCA3/MJD.
Ataxin-3 ; Autophagy ; Cell Line ; Humans ; Machado-Joseph Disease ; genetics ; metabolism ; physiopathology ; Mutation ; Nerve Tissue Proteins ; genetics ; metabolism ; Nuclear Proteins ; genetics ; metabolism ; Peptides ; metabolism ; Repressor Proteins ; genetics ; metabolism
8.Detection of the CAG trinucleotide repeats of MJD1 gene by recombinant DNA technology.
Shen ZHANG ; Jun-ling WANG ; Qian XU ; Xiao-hui LI ; Li-fang LEI ; Hong JIANG ; Lu SHEN ; Xin-xiang YAN ; Qian PAN ; Kun XIA ; Bei-sha TANG
Chinese Journal of Medical Genetics 2009;26(4):406-409
OBJECTIVETo establish a stable, accurate and intuitive method for detecting the CAG trinucleotide repeats of MJD1 gene.
METHODSThe CAG trinucleotide polymorphism of the MJD1 gene was analyzed by recombinant DNA technology and DNA sequencing in 35 spinocerebellar ataxia 3/Machado-Joseph disease (SCA3/MJD) patients from Mainland China.
RESULTSThe range of the CAG repeat of the 35 patients was 65-81 (mean = 72.96 +/- 4.24). The CAG repeats contained two CAAs and one AAG variations in the CAG motif in all the patients and majority of the healthy controls. There was a CGG/GGG polymorphism at the 3' end of the CAG repeat. The GGG allele was consistently associated with smaller CAG repeats in healthy controls. On the other hand, the CGG allele consistently existed in the patients.
CONCLUSIONRecombinant DNA technology can stably, accurately and intuitively detect the CAG trinucleotide repeat of the MJD1 gene. It should be used as a major technique to diagnose the SCA3/MJD and analyze the polymorphism of CAG sequence.
Adolescent ; Adult ; Ataxin-3 ; Base Sequence ; Female ; Genetic Engineering ; methods ; Humans ; Machado-Joseph Disease ; genetics ; Male ; Middle Aged ; Molecular Sequence Data ; Nerve Tissue Proteins ; genetics ; Nuclear Proteins ; genetics ; Polymorphism, Genetic ; Repressor Proteins ; genetics ; Sequence Analysis, DNA ; Trinucleotide Repeats ; Young Adult
9.PolyQ-expanded ataxin-3 interacts with full-length ataxin-3 in a polyQ length-dependent manner.
Na-Li JIA ; Er-Kang FEI ; Zheng YING ; Hong-Feng WANG ; Guang-Hui WANG
Neuroscience Bulletin 2008;24(4):201-208
OBJECTIVEMachado-Joseph disease (MJD), also known as spinocerebellar ataxia type 3 (SCA3), is a dominant neurodegenerative disorder caused by an expansion of the polyglutamine (polyQ) tract in MJD-1 gene product, ataxin-3 (AT3). This disease is characterized by the formation of intraneuronal inclusions, but the mechanism underlying their formation is still poorly understood. The present study is to explore the relationship between wild type (WT) AT3 and polyQ expanded AT3.
METHODSMouse neuroblastoma (N2a) cells or HEK293 cells were co-transfected with WT AT3 and different truncated forms of expanded AT3. The expressions of WT AT3 and the truncated forms of expanded AT3 were detected by Western blotting, and observed by an inverted fluorescent microscope. The interactions between AT3 and different truncated forms of expanded AT3 were detected by immunoprecipitation and GST pull-down assays.
RESULTSUsing fluorescent microscope, we observed that the truncated forms of expanded AT3 aggregate in transfected cells, and the full-length WT AT3 is recruited onto the aggregates. However, no aggregates were observed in cells transfected with the truncated forms of WT AT3. Immunoprecipitation and GST pull-down analyses indicate that WT AT3 interacts with the truncated AT3 in a polyQ length-dependent manner.
CONCLUSIONWT AT3 deposits in the aggregation that was formed by polyQ expanded AT3, which suggests that the formation of AT3 aggregation may affect the normal function of WT AT3 and increase polyQ protein toxicity in MJD.
Animals ; Ataxin-3 ; Blotting, Western ; Cell Line ; Immunoprecipitation ; Machado-Joseph Disease ; metabolism ; Mice ; Microscopy, Fluorescence ; Nuclear Proteins ; genetics ; metabolism ; Peptides ; metabolism ; Transcription Factors ; genetics ; metabolism ; Transfection
10.Recent advances in molecular genetics of spinocerebellar ataxia type 3/Machado-Joseph disease.
Dandan JIA ; Hong JIANG ; Beisha TANG
Chinese Journal of Medical Genetics 2008;25(6):660-662
To date, nearly 28 distinct genetic loci of autosomal dominant cerebellar ataxias have been identified, among them 18 disease-causing genes have been cloned. Of these, Machado-Joseph disease (MJD), also named as spinocerebellar ataxia type 3 (SCA3), is perhaps the most common subtype among different races and origins in the world. It is a neurodegenerative disease caused by the expansion of a CAG repeat in the coding region of the MJD1 gene, with obvious clinical and genetic heterogeneity. In this review, authors covered the recent advances in molecular genetic of SCA3/MJD.
Ataxin-3
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Humans
;
Machado-Joseph Disease
;
genetics
;
Molecular Biology
;
Mutation
;
Nerve Tissue Proteins
;
chemistry
;
genetics
;
metabolism
;
Nuclear Proteins
;
chemistry
;
genetics
;
metabolism
;
Repressor Proteins
;
chemistry
;
genetics
;
metabolism

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