1.Progress in shark single-domain antibody.
Chinese Journal of Biotechnology 2020;36(6):1069-1082
Monoclonal antibody (mAb) is an important biological macromolecule and widely used in immune detection, in vitro diagnostics, and drug discovery. However, the inherent properties of mAb restrict its further development, such as high molecular weight and complex structure. Therefore, there is an urgent need to develop alternatives for mAb. Various types of miniaturized antibodies have been developed, among which the variable domain of immunoglobulin new antigen receptor (VNAR) is very attractive. The shark single-domain antibody, also known as shark VNAR, is an antigen-binding domain obtained by genetic engineering technology based on the immunoglobulin new antigen receptor (IgNAR) that naturally exists in selachimorpha. It has a molecular weight of 12 kDa, which is the smallest antigen-binding domain found in the known vertebrates at present. Compared with mAb, the shark VNAR exhibits various superiorities, such as low molecular weight, high affinity, tolerance to the harsh environment, good water solubility, strong tissue penetration, and recognition of the hidden epitopes. It has attracted wide attention in the fields of immunochemical reagents and drug discovery. In this review, various aspects of shark VNAR are elaborated, including the structural and functional characteristics, generating and humanization techniques, affinity maturation strategies, application fields, advantages and disadvantages, and prospects.
Animals
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Antibodies, Monoclonal
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immunology
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Antibodies, Monoclonal, Humanized
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immunology
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Antigens
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Epitopes
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metabolism
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Protein Domains
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immunology
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Receptors, Antigen
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chemistry
;
immunology
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Sharks
2.Human Leukocyte Antigen-C Genotype and Killer Immunoglobulin-like Receptor-Ligand Matching in Korean Living Donor Liver Transplantation.
Hyeyoung LEE ; Ki Hyun PARK ; Hye Sun PARK ; Ji Hyeong RYU ; Jihyang LIM ; Yonggoo KIM ; Gun Hyung NA ; Dong Goo KIM ; Eun Jee OH
Annals of Laboratory Medicine 2017;37(1):45-52
BACKGROUND: The interaction between killer immunoglobulin-like receptors (KIRs) and HLA class I regulates natural killer (NK) cell cytotoxicity and function. The impact of NK cell alloreactivity through KIR in liver transplantation remains unelucidated. Since the frequency of HLA-C and KIR genotypes show ethnic differences, we assessed the impact of HLA-C, KIR genotype, or KIR-ligand mismatch on the allograft outcome of Korean liver allografts. METHODS: One hundred eighty-two living donor liver transplant patients were studied. Thirty-five patients (19.2%) had biopsy-confirmed acute rejection (AR), and eighteen (9.9%) had graft failure. The HLA-C compatibility, KIR genotypes, ligand-ligand, and KIR-ligand matching was retrospectively investigated for association with allograft outcomes. RESULTS: Homozygous C1 ligands were predominant in both patients and donors, and frequency of the HLA-C2 allele in Koreans was lower than that in other ethnic groups. Despite the significantly lower frequency of the HLA-C2 genotype in Koreans, donors with at least one HLA-C2 allele showed higher rates of AR than donors with no HLA-C2 alleles (29.2% vs 15.7%, P=0.0423). Although KIR genotypes also showed ethnic differences, KIR genotypes and the number of activating KIR/inhibitory KIR were not associated with the allograft outcome. KIR-ligand mismatch was expected in 31.6% of Korean liver transplants and had no impact on AR or graft survival. CONCLUSIONS: This study could not confirm the clinical impact of KIR genotypes and KIR-ligand mismatch. However, we demonstrated that the presence of HLA-C2 allele in the donor influenced AR of Korean liver allografts.
Adult
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Alleles
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Asian Continental Ancestry Group/*genetics
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Female
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Genotype
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Graft Rejection
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Graft Survival
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HLA-C Antigens/*genetics
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Homozygote
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Humans
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Killer Cells, Natural/cytology/immunology
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Ligands
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*Liver Transplantation
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Male
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Middle Aged
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Proportional Hazards Models
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Receptors, KIR/chemistry/*genetics/metabolism
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Republic of Korea
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Tissue Donors
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Transplantation, Homologous
3.Immunogenicity and prediction of epitopic region of antigen Ag I/II and glucosyltransferase from Streptococcus mutans.
Xi-Xi CAO ; Jian FAN ; Jiang CHEN ; Yu-Hong LI ; Ming-Wen FAN
Journal of Huazhong University of Science and Technology (Medical Sciences) 2016;36(3):416-421
The levels of Streptococcus (S.) mutans infections in saliva were evaluated and a comparison for specific antibody levels among children with different levels of S. mutans infection was made. The promising epitopic regions of antigen AgI/II (PAc) and glucosyltransferase (GTF) for potential vaccine targets related to S. mutans adherence were screened. A total of 94 children aged 3-4 years were randomly selected, including 53 caries-negative and 41 caries-positive children. The values of S. mutans and those of salivary total secretory immunoglobulin A (sIgA), anti-PAc and anti-Glucan binding domain (anti-GLU) were compared to determine the correlation among them. It was found the level of s-IgA against specific antigens did not increase with increasing severity of S. mutans infection, and the complete amino acid sequence of PAc and GTFB was analyzed using the DNAStar Protean system for developing specific anti-caries vaccines related to S. mutans adherence. A significantly positive correlation between the amount of S. mutans and children decayed, missing, and filled teeth index was observed. No significant difference was detected in specific sIgA against PAc or GLU between any two groups. No significant correlation was found between such specific sIgA and caries index. A total of 16 peptides from PAc as well as 13 peptides from GTFB were chosen for further investigation. S. mutans colonization contributed to early children caries as an important etiological factor. The level of sIgA against specific antigens did not increase with increasing severity of S. mutans infection in children. The epitopes of PAc and GTF have been screened to develop the peptide-based or protein-based anti-caries vaccines.
Antibodies, Bacterial
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biosynthesis
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Antigens, Bacterial
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chemistry
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immunology
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Bacterial Proteins
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chemistry
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immunology
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Case-Control Studies
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Child, Preschool
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Dental Caries
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immunology
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pathology
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prevention & control
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Epitopes
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chemistry
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immunology
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Female
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Glucosyltransferases
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chemistry
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immunology
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Humans
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Immunoglobulin A, Secretory
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biosynthesis
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Male
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Peptides
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chemistry
;
immunology
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Saliva
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chemistry
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microbiology
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Severity of Illness Index
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Streptococcal Vaccines
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biosynthesis
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chemistry
;
immunology
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Streptococcus mutans
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chemistry
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immunology
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pathogenicity
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Vaccines, Subunit
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Virulence Factors
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chemistry
;
immunology
4.Pentoxifylline inhibits liver fibrosis via hedgehog signaling pathway.
Hui LI ; Juan HUA ; Chun-Xia GUO ; Wei-Xian WANG ; Bao-Ju WANG ; Dong-Liang YANG ; Ping WEI ; Yin-Ping LU
Journal of Huazhong University of Science and Technology (Medical Sciences) 2016;36(3):372-376
Infection of schistosomiasis japonica may eventually lead to liver fibrosis, and no effective antifibrotic therapies are available but liver transplantation. Hedgehog (HH) signaling pathway has been involved in the process and is a promising target for treating liver fibrosis. This study aimed to explore the effects of pentoxifylline (PTX) on liver fibrosis induced by schistosoma japonicum infection by inhibiting the HH signaling pathway. Phorbol12-myristate13-acetate (PMA) was used to induce human acute mononuclear leukemia cells THP-1 to differentiate into macrophages. The THP-1-derived macrophages were stimulated by soluble egg antigen (SEA), and the culture supernatants were collected for detection of activation of macrophages. Cell Counting Kit-8 (CCK-8) was used to detect the cytotoxicity of the culture supernatant and PTX on the LX-2 cells. The LX-2 cells were administered with activated culture supernatant from macrophages and(or) PTX to detect the transforming growth factor-β gene expression. The mRNA expression of shh and gli-1, key parts in HH signaling pathway, was detected. The mRNA expression of shh and gli-1 was increased in LX-2 cells treated with activated macrophages-derived culture supernatant, suggesting HH signaling pathway may play a key role in the activation process of hepatic stellate cells (HSCs). The expression of these genes decreased in LX-2 cells co-cultured with both activated macrophages-derived culture supernatant and PTX, indicating PTX could suppress the activation process of HSCs. In conclusion, these data provide evidence that PTX prevents liver fibrogenesis in vitro by the suppression of HH signaling pathway.
Animals
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Antigens, Helminth
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isolation & purification
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pharmacology
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Cell Culture Techniques
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Cell Differentiation
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drug effects
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Cell Line
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Culture Media, Conditioned
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chemistry
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pharmacology
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Gene Expression Regulation
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Hedgehog Proteins
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agonists
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antagonists & inhibitors
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genetics
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immunology
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Hepatic Stellate Cells
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cytology
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drug effects
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metabolism
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Humans
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Liver Cirrhosis
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metabolism
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parasitology
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prevention & control
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Macrophage Activation
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drug effects
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Macrophages
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cytology
;
drug effects
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immunology
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Models, Biological
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Monocytes
;
cytology
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drug effects
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metabolism
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Pentoxifylline
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pharmacology
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Phosphodiesterase Inhibitors
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pharmacology
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RNA, Messenger
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genetics
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immunology
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Schistosoma japonicum
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chemistry
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Signal Transduction
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Tetradecanoylphorbol Acetate
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pharmacology
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Zinc Finger Protein GLI1
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genetics
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immunology
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Zygote
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chemistry
5.Opacity proteins of neisseria gonorrhoeae in lipooligosaccharide mutants lost ability to interact with neutrophil-restricted CEACAM3 (CD66d).
Song ZHANG ; Ya-Ting TU ; Hua-Hua CAI ; Hong-Hui DING ; Qiao LI ; Ying-Xia HE ; Xin-Xin LIU ; Xin WANG ; Feng HU ; Tie CHEN ; Hong-Xiang CHEN
Journal of Huazhong University of Science and Technology (Medical Sciences) 2016;36(3):344-349
Lipooligosacharide (LOS) of Neisseria gonorrhoeae (gonococci, GC) is involved in the interaction of GC with host cells. Deletion of the alpha-oligosaccharide (alpha-OS) moiety of LOS (lgtF mutant) significantly impairs invasion of GC into epithelial cell lines. GC opacity (Opa) proteins, such as OpaI, mediate phagocytosis and stimulate chemiluminescence responses in neutrophils in part through interaction with members of the carcinoembryonic antigen (CEA) family, which includes CEACAM3 (CD66d), a human neutrophil specific receptor for phagocytosis of bacteria. In the present work, we examined the effects of OpaI-expressing lgtF mutant on phagocytosis by HeLa-CEACAM3 cells and chemiluminescence responses in neutrophils. The results showed that lgtF mutant even expressing OpaI completely lost the ability to promote either phagocytosis mediated by CEACAM3 interaction in HeLa cells or chemiluminescence responses in neutrophils. These data indicated that Opa proteins in the lgtF mutant, which might result from the conformational change, cannot be functional.
Antigens, Bacterial
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chemistry
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genetics
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immunology
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metabolism
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Carbohydrate Sequence
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Carcinoembryonic Antigen
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genetics
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immunology
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Gene Expression Regulation
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HeLa Cells
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Host-Pathogen Interactions
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Humans
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Lipopolysaccharides
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chemistry
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immunology
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Luminescent Measurements
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Mutation
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Neisseria gonorrhoeae
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genetics
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metabolism
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pathogenicity
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Neutrophils
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immunology
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microbiology
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Phagocytosis
7.Screening and Identification of Antigenic Proteins from the Hard Tick Dermacentor silvarum (Acari: Ixodidae).
Tiantian ZHANG ; Xuejiao CUI ; Jincheng ZHANG ; Hui WANG ; Meng WU ; Hua ZENG ; Yuanyuan CAO ; Jingze LIU ; Yonghong HU
The Korean Journal of Parasitology 2015;53(6):789-793
In order to explore tick proteins as potential targets for further developing vaccine against ticks, the total proteins of unfed female Dermacentor silvarum were screened with anti-D. silvarum serum produced from rabbits. The results of western blot showed that 3 antigenic proteins of about 100, 68, and 52 kDa were detected by polyclonal antibodies, which means that they probably have immunogenicity. Then, unfed female tick proteins were separated by 12% SDS-PAGE, and target proteins (100, 68, and 52 kDa) were cut and analyzed by LC-MS/MS, respectively. The comparative results of peptide sequences showed that they might be vitellogenin (Vg), heat shock protein 60 (Hsp60), and fructose-1, 6-bisphosphate aldolase (FBA), respectively. These data will lay the foundation for the further validation of antigenic proteins to prevent infestation and diseases transmitted by D. silvarum.
Animals
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Antigens/*chemistry/immunology
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Arthropod Proteins/*chemistry/immunology
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Electrophoresis, Polyacrylamide Gel
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Female
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Ixodidae/*chemistry/immunology
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Molecular Weight
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Rabbits
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Tandem Mass Spectrometry
8.Analyses of the TCR repertoire of MHC class II-restricted innate CD4+ T cells.
Byung Hyun KANG ; Hye Sook MIN ; You Jeong LEE ; Bomi CHOI ; Eun Ji KIM ; Jonghoon LEE ; Jeong Rae KIM ; Kwang Hyun CHO ; Tae Jin KIM ; Kyeong Cheon JUNG ; Seong Hoe PARK
Experimental & Molecular Medicine 2015;47(3):e154-
Analysis of the T-cell receptor (TCR) repertoire of innate CD4+ T cells selected by major histocompatibility complex (MHC) class II-dependent thymocyte-thymocyte (T-T) interaction (T-T CD4+ T cells) is essential for predicting the characteristics of the antigens that bind to these T cells and for distinguishing T-T CD4+ T cells from other types of innate T cells. Using the TCRmini Tg mouse model, we show that the repertoire of TCRalpha chains in T-T CD4+ T cells was extremely diverse, in contrast to the repertoires previously described for other types of innate T cells. The TCRalpha chain sequences significantly overlapped between T-T CD4+ T cells and conventional CD4+ T cells in the thymus and spleen. However, the diversity of the TCRalpha repertoire of T-T CD4+ T cells seemed to be restricted compared with that of conventional CD4+ T cells. Interestingly, the frequency of the parental OT-II TCRalpha chains was significantly reduced in the process of T-T interaction. This diverse and shifted repertoire in T-T CD4+ T cells has biological relevance in terms of defense against diverse pathogens and a possible regulatory role during peripheral T-T interaction.
Amino Acid Sequence
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Animals
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Antigens, Surface/metabolism
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CD4-Positive T-Lymphocytes/cytology/*immunology/*metabolism
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Cell Communication
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Cell Differentiation/genetics/immunology
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Clonal Evolution
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Histocompatibility Antigens Class II/*immunology
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*Immunity, Innate
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Immunophenotyping
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Lymphocyte Count
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Mice
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Mice, Knockout
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Mice, Transgenic
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Peptide Fragments/chemistry
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Phenotype
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Receptors, Antigen, T-Cell/chemistry/*genetics/metabolism
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Receptors, Antigen, T-Cell, alpha-beta/chemistry/genetics
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Spleen/cytology
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Thymocytes/cytology/immunology/metabolism
9.Phylogenetic Analyses and Characterization of the VP7 Genes of Serotype G9 Rotaviruses Circulating in Nanjing (China), 2012-2013.
Xuan WANG ; Limin SHI ; Mengkai QIAO ; Yan WANG ; Min HE ; Wei YONG ; Xuefei DU ; Baofu GUO ; Guoxiang XIE ; Ziqian XU ; Jie DING
Chinese Journal of Virology 2015;31(4):425-432
Group-A rotaviruses are recognized as the most common cause of acute diarrhea. Phylogenetic analyses of the VP7 genes of rotaviruses circulating in Nanjing (China) could aid in the development of rotavirus vaccines. A total of 908 stool specimens were collected from patients suffering from acute diarrhea in Nanjing between October 2012 and December 2013, and were tested further for rotaviruses. Fifty rotavirus isolates selected randomly were typed by reverse transcription-polymerase chain reaction using serotype-specific primers for G genotyping. VP7 genes of 19 G9 strains were sequenced for further genetic characterization. Among the 908 stool specimens examined during the surveillance period, 103 (11.34%) were rotavirus-positive. G9 was the most predominant genotype (78.0%), followed by G2, G1 and G3. Sequence and phylogenetic analyses of the VP7 genes of serotype G9 rotaviruses revealed these strains to comprise two lineages (G9-VI, G9-III) and to be dominated by the G9-VI lineage (which belonged to a unique subcluster of Japanese and Chinese G9 strains). Amino-acid sequences of the four antigenic regions (A, B, C or F) were variant among a portion of strains, which may have contributed to the prevalence of G9 rotaviruses in this area.
Adult
;
Amino Acid Sequence
;
Antigens, Viral
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chemistry
;
genetics
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Capsid Proteins
;
chemistry
;
genetics
;
China
;
Evolution, Molecular
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Humans
;
Infant
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Molecular Sequence Data
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Mutation
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Phylogeny
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Rotavirus
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genetics
;
immunology
;
physiology
;
Serogroup
10.Preparation and immunogenicity identification of artificial antigen for luteoloside.
Bo ZHANG ; Zhi-lai ZHAN ; Li-ping KANG ; Yuan YUAN ; Lu-qi HUANG ; Feng-wei DING ; Tie-gui NAN
China Journal of Chinese Materia Medica 2015;40(22):4359-4363
Lonicerae Japonicae Flos was one of the most widely used traditional Chinese medicine for its special biological activities. The content of luteoloside, one of its major compounds, was an important standard for the quantity control of Lonicerae Japonicae Flos. The major method used for the detection of luteoloside was instrumental analysis. Compared with the ELISA method, instrumental analysis was time-consuming, complex pretreatment and low-throughout. Thus, it was significantly important to develop an enzyme-linked immunosorbent assay (ELISA) for luteoloside analysis. Here, the conjugates of luteoloside-bovine (LG-BSA) and luteoloside-ovalbumin (LG-OVA) were produced as the immunogen and coating antigen by the carbodiimide ( CDI) method, respectively. The conjugation ratio of carrier protein and the hapten in the conjugate were determined by UV-Vis spectrophotometry (UV). LG-BSA conjugate was used to immunize Bal b/c mice to produce antiserum. The titer and specificity of antiserum were detected by ELISA. The conjugation ratio of hapten and carries protein were 3. 7: 1 (LG-BSA) and 1. 0: 1 (LG-OVA). The antiserum titer was higher than 2 000 with the linear range of 18.4-4 852.4 μg x L(-1), R2 = 0.988 4 and IC50 = 298.7 μg x L(-1). The result showed that the conjugate antigen LG-BSA was synthesized successfully and the mice can produce specific antiserum injected with artificial antigen.
Animals
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Antibodies
;
analysis
;
immunology
;
Antigens
;
chemistry
;
immunology
;
Drugs, Chinese Herbal
;
analysis
;
Enzyme-Linked Immunosorbent Assay
;
methods
;
Female
;
Immunization
;
Lonicera
;
chemistry
;
immunology
;
Mice
;
Mice, Inbred BALB C

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