1.Expression, purification, and characterization of cell-permeable fusion antioxidant enzyme sensitive to matrix metalloproteinases-2/9.
Huocong HE ; Lixiang LIN ; Lingling LI ; Lunqiao WU ; Haiying LIN ; Jianru PAN
Chinese Journal of Biotechnology 2022;38(9):3515-3527
Antioxidant enzymes fused with cell-penetrating peptides could enter cells and protect cells from irradiation damage. However, the unselective transmembrane ability of cell-penetrating peptide may also bring antioxidant enzymes into tumor cells, thus protecting tumor cells and consequently reducing the efficacy of radiotherapy. There are active matrix metalloproteinase (MMP)-2 or MMP-9 in most tumor cellular microenvironments. Therefore, a fusion protein containing an MMP-2/9 cleavable substrate peptide X, a cell-penetrating peptide R9, a glutathione S-transferase (GST), and a human Cu, Zn superoxide dismutase (SOD1), was designed and named GST-SOD1-X-R9. In the tumor microenvironment, GST-SOD1-X-R9 would lose its cell-penetrating peptide and could not enter tumor cells due to the cleavage of substrate X by active MMP-2/9, thereby achieving selected entering normal cells. The complete nucleotide sequence of SOD1-X-R9 was synthesized and inserted into the prokaryotic expression vector pGEX-4T-1. The pGEX4T-1-SOD1-X-R9 recombinant plasmid was obtained, and soluble expression of the fusion protein was achieved. GST-SOD1-X-R9 was purified by ammonium sulfate precipitation and GST affinity chromatography. The molecular weight of the fusion protein was approximately 47 kDa, consistent with the theoretical value. The SOD and GST activities were 2 954 U/mg and 328 U/mg, respectively. Stability test suggested that almost no change in either SOD activity or GST activity of GST-SOD1-X-R9 was observed under physiological conditions. The fusion protein could be partially digested by collagenase Ⅳ in solution. Subsequently, the effect of MMP-2/9 activity on transmembrane ability of the fusion protein was tested using 2D and 3D cultured HepG2 cells. Little extracellular MMP-2 activity of HepG2 cells was observed under 2D culture condition. While under the 3D culture model, the size and the MMP-2 activity of the HepG2 tumor spheroid increased daily. GST-SOD1-R9 proteins showed the same transmembrane efficiency in 2D cultured HepG2 cells, but the transmembrane efficiency of GST-SOD1-X-R9 in 3D cultured HepG2 spheres was reduced remarkably. This study provided a basis for further investigating the selectively protective effect of GST-SOD1-X-R9 against oxidative damage in normal cells.
Ammonium Sulfate
;
Antioxidants
;
Cell-Penetrating Peptides/pharmacology*
;
Endopeptidases
;
Glutathione Transferase/metabolism*
;
Humans
;
Matrix Metalloproteinase 2/genetics*
;
Matrix Metalloproteinase 9/genetics*
;
Recombinant Fusion Proteins
;
Recombinant Proteins
;
Superoxide Dismutase/metabolism*
;
Superoxide Dismutase-1
2.Biocontrol of Orchid-pathogenic Mold, Phytophthora palmivora, by Antifungal Proteins from Pseudomonas aeruginosa RS1.
Rapeewan SOWANPREECHA ; Panan RERNGSAMRAN
Mycobiology 2018;46(2):129-137
Black rot disease in orchids is caused by the water mold Phytophthora palmivora. To gain better biocontrol performance, several factors affecting growth and antifungal substance production by Pseudomonas aeruginosa RS1 were verified. These factors include type and pH of media, temperature, and time for antifungal production. The results showed that the best conditions for P. aeruginosa RS1 to produce the active compounds was cultivating the bacteria in Luria-Bertani medium at pH 7.0 for 21 h at 37 °C. The culture filtrate was subjected to stepwise ammonium sulfate precipitation. The precipitated proteins from the 40% to 80% fraction showed antifungal activity and were further purified by column chromatography. The eluted proteins from fractions 9–10 and 33–34 had the highest antifungal activity at about 75% and 82% inhibition, respectively. SDS-PAGE revealed that the 9–10 fraction contained mixed proteins with molecular weights of 54 kDa, 32 kDa, and 20 kDa, while the 33–34 fraction contained mixed proteins with molecular weights of 40 kDa, 32 kDa, and 29 kDa. Each band of the proteins was analyzed by LC/MS to identify the protein. The result from Spectrum Modeler indicated that these proteins were closed similarly to three groups of the following proteins; catalase, chitin binding protein, and protease. Morphological study under scanning electron microscopy demonstrated that the partially purified proteins from P. aeruginosa RS1 caused abnormal growth and hypha elongation in P. palmivora. The bacteria and/or these proteins may be useful for controlling black rot disease caused by P. palmivora in orchid orchards.
Ammonium Sulfate
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Bacteria
;
Carrier Proteins
;
Catalase
;
Chitin
;
Chromatography
;
Electrophoresis, Polyacrylamide Gel
;
Fungi*
;
Hydrogen-Ion Concentration
;
Hyphae
;
Microscopy, Electron, Scanning
;
Molecular Weight
;
Phytophthora*
;
Pseudomonas aeruginosa*
;
Pseudomonas*
;
Water
3.Isolation and purification of alpha-glycerophosphate oxidase in a polyethylene glycol/(NH4 )2SO4 aqueous two-phase system.
Yao MENG ; Jiagui JIN ; Shuangfeng LIU ; Min YANG ; Qinglian ZHANG ; Li WAN ; Kun TANG
Journal of Biomedical Engineering 2014;31(1):136-141
Alpha-glycerophosphate oxidase (alpha-GPO) from Enterococcus casseli flavus was successfully isolated and purified by using polyethylene glycol (PEG)/(NH4)2SO4 aqueous two-phase system (ATPS). The results showed that the chosen PEG/(NH4)2SO4 ATPS could be affected by PEG molecular weight, pH, concentration of PEG and (NH4)2SO4, and inorganic salt as well as additional amount of crude enzyme. After evaluating these influencing factors, the final optimum purification strategy was formed by 16.5% (m/m) PEG2000, 13.2% (m/m) (NH4)2SO4, pH 7.5 and 30% (m/m) additive crude enzyme, respectively. The NaCl was a negative influencing factor which would lead to lower purification fold and activity recovery. These conditions eventually resulted in the activity recovery of 89% (m/m), distribution coefficient of 1.2 and purification fold of 7.0.
Ammonium Sulfate
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chemistry
;
Glycerolphosphate Dehydrogenase
;
chemistry
;
isolation & purification
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Molecular Weight
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Polyethylene Glycols
;
chemistry
;
Water
4.Cross-validation of the osmotic pressure based on Pitzer model with air humidity osmometry at high concentration of ammonium sulfate solutions.
Xiao-Lan WANG ; Ting-Ting ZHAN ; Xian-Cheng ZHAN ; Xiao-Ying TAN ; Xiao-You QU ; Xin-Yue WANG ; Cheng-Rong LI
Acta Pharmaceutica Sinica 2014;49(1):101-105
The osmotic pressure of ammonium sulfate solutions has been measured by the well-established freezing point osmometry in dilute solutions and we recently reported air humidity osmometry in a much wider range of concentration. Air humidity osmometry cross-validated the theoretical calculations of osmotic pressure based on the Pitzer model at high concentrations by two one-sided test (TOST) of equivalence with multiple testing corrections, where no other experimental method could serve as a reference for comparison. Although more strict equivalence criteria were established between the measurements of freezing point osmometry and the calculations based on the Pitzer model at low concentration, air humidity osmometry is the only currently available osmometry applicable to high concentration, serves as an economic addition to standard osmometry.
Ammonium Sulfate
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chemistry
;
Freezing
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Humidity
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Osmolar Concentration
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Osmometry
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methods
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Osmotic Pressure
;
Solutions
5.Iron-fortified recombinant Saccharomyces cerevisiae producing Sus scrofa ferritin heavy-chain recovers iron deficiency in mice.
Hwan LIM ; Jong Taek KIM ; Myoung Dong KIM ; Ki Jong RHEE ; Bae Dong JUNG
Korean Journal of Veterinary Research 2012;52(4):263-268
In this study, we produced iron-fortified yeast (Saccharomyces cerevisiae) producing Sus scrofa ferritin heavy-chain to provide iron supplementation in anemic piglets. We determined whether iron-ferritin accumulated in recombinant yeasts could improve iron deficiency in mice. C57BL/6 male mice exposed to Fe-deficient diet for 2 weeks were given a single dose of ferrous ammonium sulfate (FAS), ferritin-producing recombinant yeast (APO), or APO reacted with iron (Fe2+) (FER). The bioavailability of recombinant yeasts was examined by measuring body weight gain, hemoglobin concentration and hematocrit value 1 week later. In addition, ferritin protein levels were evaluated by western blot analysis and iron stores in tissues were measured by inductively coupled plasma spectrometer. We found that anemic mice treated with FER exhibited increased levels of ferritin heavy-chain in spleen and liver. Consistently, this treatment restored the iron concentration in these tissues. In addition, this treatment significantly increased hemoglobin value and the hematocrit ratio. Furthermore, FER treatment significantly enhanced body weight gain. These results suggest that the iron-fortified recombinant yeast strain is bioavailable.
Ammonium Sulfate
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Anemia
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Animals
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Biological Availability
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Blotting, Western
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Body Weight
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Diet
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Ferritins
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Ferrous Compounds
;
Hematocrit
;
Hemoglobins
;
Humans
;
Iron
;
Liver
;
Male
;
Mice
;
Plasma
;
Quaternary Ammonium Compounds
;
Saccharomyces
;
Saccharomyces cerevisiae
;
Spleen
;
Sprains and Strains
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Sus scrofa
;
Yeasts
6.Fermentation optimization by response surface methodology for enhanced production of beta-glucosidase of Aspergillus niger HDF05.
Hongzhi LING ; Jingping GE ; Wenxiang PING ; Xiuhong XU
Chinese Journal of Biotechnology 2011;27(3):419-426
In order to obtain high beta-glucosidase productivity, we optimized the fermentation parameters for beta-glucosidase production by Aspergillus niger HDF05. First, we screened the important parameters by Plackeet-Burman design. Second, we used the path of steepest ascent to approach to the biggest response region of parameters affecting beta-glucosidase production. Then, we obtained the optimal parameters by central composite design and response surface analysis. We developed a quadratic polynomial equation for predicting beta-glucosidase production level. The results showed that the important parameters were temperature, packing volume, concentrations of wheat bran and (NH4)2SO4. The optimal fermentation parameters were as follows: temperature 28 degrees C, packing volume 71.4 mL/250 mL, wheat bran 36 g/L and (NH4)2SO4 5.5 g/L. Under the optimal conditions, we obtained the maximum enzyme activity of 60.06 U/mL, with an increase of 23.9% compared to the original fermentation parameters. During enzymatic hydrolysis of acid-pretreated corncob, addition of beta-glucosidase from Aspergillus niger HDF05 greatly reduced the inhibition caused by cellobiose, and the hydrolysis yield was improved from 66.7% to 80.4%.
Ammonium Sulfate
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pharmacology
;
Aspergillus niger
;
enzymology
;
growth & development
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Culture Techniques
;
methods
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Fermentation
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Industrial Microbiology
;
Temperature
;
beta-Glucosidase
;
biosynthesis
7.Scale-up preparation of phycoerythrin from Porphyra haitanensis.
Chunxia LI ; Daiyuan YAN ; Jing NI ; Ziye GUO ; Chun'er CAI ; Peimin HE
Chinese Journal of Biotechnology 2011;27(4):614-619
We developed large-scale preparation of phycoerythrin from Porphyra haitanensis, a main economic red algae in China. Firstly, P. haitanensis thallus was broken by using "swelling and smash" method. Then times of grads ammonium sulfate precipitation applied to the crude extraction were compared. Desalted solution was further purified with one-step chromatography using hydroxyapatite and properties on spectrum and molecular weight were identified finally. The results indicated that after four times of ammonium sulfate precipitation (15%, 50%, 10% and 40%), the absorption spectrum purity of P. haitanensis achieved 0.9 (A564/A280), and 507.82 mg phycoerythrin (A564/A280 > 3.2) was obtained from 7 kg fresh algae after further hydroxyapatite chromatography. This research provides a potential way for preparation of phycoerythrin in large sclae.
Ammonium Sulfate
;
chemistry
;
Chromatography
;
methods
;
Phycoerythrin
;
isolation & purification
;
Porphyra
;
chemistry
8.Comparison of mtDNA extracting methods for common sarcosaphagous insects.
Yao-Qing CHEN ; Ya-Dong GUO ; Mao-Zhi LI ; Feng XIONG ; Jian-Bo LI ; Ji-Feng CAI
Journal of Forensic Medicine 2011;27(4):265-270
OBJECTIVE:
To compare effects of three different methods for mtDNA extraction from common sarcosaphagous insects including cetyl trimethyl ammonium bromide (CTAB) method, sodium dodecyl sulfate-potassium acetate (SDS-KAc) method and sodium dodecyl sulfate-proteinase K (SDS-PK) method.
METHODS:
Seventy-two insects from four species [Chrysomya megacephala (Fabricius, 1784), Eusilpha bicolor (Fairmaire, 1896), Paraeutrichopus pecoudi (Mateu, 1954), Vespa velutina (Lepeletier, 1836)] were collected from the corpses of the rabbits in Changsha district. The total DNA of above samples was extracted by CTAB, SDS-Kac and SDS-PK methods. The purity and concentration of DNA were examined by protein-nucleic acid spectrophotometry, and mtDNA were amplified by specific primers and PCR products were detected by agarose gel electrophoresis. Then PCR products were sequenced and subsequently up-loaded to GenBank.
RESULTS:
mtDNA was successfully extracted with three methods from most of the samples. The SDS-PK method was better in DNA purity compared to other methods and the CTAB method was superior in extracting DNA from old samples, while SDS-KAc method showed no significant difference for extraction effects of different samples.
CONCLUSION
The most appropriate method should be chosen depending on different situations. SDS-PK method is expected to obtain high-quality DNA, while CTAB method is preferred in extracting obsolete samples. SDS-KAc method is low cost and can be used in various kinds of preliminary experiments.
Animals
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Coleoptera/genetics*
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DNA Primers
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DNA, Mitochondrial/isolation & purification*
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Diptera/genetics*
;
Electrophoresis, Agar Gel
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Entomology
;
Forensic Medicine/methods*
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Gene Amplification
;
Insecta/genetics*
;
Polymerase Chain Reaction/methods*
;
Quaternary Ammonium Compounds/chemistry*
;
Rabbits
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Reproducibility of Results
;
Sequence Analysis, DNA
;
Sodium Dodecyl Sulfate/chemistry*
9.Effects of solvent environment on the structure of hepatitis B surface antigen (HBsAg).
Hang YUAN ; Yan LI ; Yongdong HUANG ; Jian LUO ; Guanghui MA ; Zhiguo SU
Chinese Journal of Biotechnology 2010;26(12):1674-1682
As a virus-like particle, hepatitis B surface antigen (HBsAg) was the primary component of hepatitis B vaccine. HBsAg was maintained by the non-covalent interaction of proteins and lipids. The intact structure of HBsAg particle was vital to its function. However, there was no report about the effects of solvent environment on HBsAg structure. In this paper, we studied the effects of temperature, pH, ionic type and salt concentration on HBsAg structure. The results showed that HBsAg was stable at normal temperature, but began to denature above 60 degrees C. The aggregation of HBsAg at pH 3.0 and 4.0 was nearly irreversible, but partly reversible at pH 5.0. The influence of ionic type on HBsAg was generally in accordance with Hofmeister sequence, except that SO4(2-) caused more aggregation than F-. HBsAg aggregates started to be visible in 0.4 mol/L (NH4)2SO4, and the extent of aggregation increased with the salt concentration. Therefore, caution must be taken when using (NH4)2SO4 in the hydrophobic chromatography purification of HBsAg.
Ammonium Sulfate
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chemistry
;
Hepatitis B Surface Antigens
;
chemistry
;
Hepatitis B Vaccines
;
chemistry
;
Hepatitis B virus
;
chemistry
;
Hydrogen-Ion Concentration
;
Protein Denaturation
;
Solvents
;
Temperature

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