1.Clinical and molecular genetic analysis of Angelman syndrome with oculocutaneous albinism type 2: A case report and literature review.
Qiu Jun ZHOU ; Pan GONG ; Xian Ru JIAO ; Zhi Xian YANG
Journal of Peking University(Health Sciences) 2023;55(1):181-185
To summarize the clinical diagnosis and treatment process and genetic test results and characteristics of one child with Angelman syndrome (AS) complicated with oculocutaneous albinism type 2 (OCA2), and to review the literature. "Angelman syndrome" "P gene" and "Oculocutaneous albinism type 2" were used as keywords to search at CNKI, Wanfang, and PubMed databases (from creation to December 2019). Then all the patients were analyzed. The patient in this study was a girl aged 1 year. After birth, she was found to present as white body, yellow hair, and nystagmus. She could raise her head at the age of 2 months and turn over at the age of 7 months. The head circumference was 42 cm and she could not sit alone or speak at present. Trio-based exome sequencing revealed that the patient carried a homozygous mutation of c.168del (p.Gln58ArgfsTer44) in the P gene, and her father was heterozygous and her mother was wild-type. The detection of copy number variation showed deletion on the maternal chromosome at 15q11.2-13.1 region (P gene located in this region) in the patient. Until December 2019, a total of 4 cases in the 4 literature had been reported. Adding our case here, the 5 cases were summarized and found that all the cases showed white skin, golden hair, and shallow iris after birth. Comprehensive developmental delay was found around 6 months of age after birth, and the language remained undeveloped in 2 cases till follow-up into childhood. Seizures occurred in 4 patients. Two cases had ataxia. All the 5 cases had acquired microcephaly. Two cases had a family history of albinism. Electroencephalogram monitoring was completed in 3 cases and the results were abnormal. Genetic tests showed that all the 5 cases had deletion on maternal chromosome at 15q11-13 region. Four cases carried mutation of P gene on paternal chromosome. And 1 case was clinically diagnosed as OCA2 without P gene test. AS combined with OCA2 is relatively rare. OCA2 is easily diagnosed based on the obvious clinical manifestations after birth. When combined with clinical manifestations such as neurodevelopmental delay, it might indicate the possibility of AS that is hardly diagnosed clinically at an early stage. Genetic tests can reveal the cross-genetic phenomenon of AS and OCA2 and the complex of them can be eventually diagnosed.
Female
;
Humans
;
Albinism, Oculocutaneous/genetics*
;
DNA Copy Number Variations
;
Membrane Transport Proteins/genetics*
;
Molecular Biology
;
Mutation
;
Infant
2.Diagnosis of a case with Hermansky-Pudlak syndrome type 5 through high-throughput sequencing and a literature review.
Dong WANG ; Jing HUANG ; Kaihui ZHANG ; Yuqing LYU ; Min GAO ; Jian MA ; Ya WAN ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2023;40(11):1392-1396
OBJECTIVE:
To explore the clinical and genetic characteristics of a patient with Hermansky-Pudlak syndrome type 5 (HPS-5).
METHODS:
A child with HPS-5 who had attended the Children's Hospital Affiliated to Shandong University on October 3, 2019 was selected as the study subject. Clinical data of the child were collected. Genetic variant was analyzed through high-throughput sequencing. A literature review was also carried out.
RESULTS:
The child, a 1-year-and-5-month-old girl, had nystagmus since childhood, lost of retinal pigmentation by fundus examination and easy bruising. High-throughput sequencing revealed that she has harbored compound heterozygous variants of the HPS5 gene, namely c.1562_1563delAA (p.F521Sfs*27) and c.1404C>A (p.C468X), which were inherited from his father and mother, respectively. Based on the guidelines from the American College for Medical Genetics and Genomics (ACMG), both variants were predicted to be pathogenic (PVS+PM2_Supporting+PM3+PP4). Among 18 previously reported HPS-5 patients, all had had eye problems, and most of them had tendency for bleeding. Eight cases had carried compound heterozygous variants of the HPS5 gene, 8 carried homozygous variants, 2 carried double homozygous variants, and most of them were null mutations.
CONCLUSION
The c.1562_1563delAA(p.F521Sfs*27) and c.1404C>A (p.C468X) compound heterozygous variants of the HPS5 gene probably underlay the HPS-5 in this child. High-throughput sequencing has provided an important tool for the diagnosis. HSP-5 patients usually have typical ocular albinism and/or oculocutaneous albinism and tendency of bleeding, which are commonly caused by compound heterozygous and homozygous variants of the HPS5 gene, though serious complications have been rare.
Female
;
Humans
;
Infant
;
Hermanski-Pudlak Syndrome/pathology*
;
High-Throughput Nucleotide Sequencing
;
Mutation
3.Genetic testing and prenatal diagnosis for thirteen Chinese pedigrees affected with oculocutaneous albinism.
Yujiao YANG ; Bin MAO ; Qiong WANG ; Shubing LIE ; Ruixuan ZHANG ; Xiuli ZHAO
Chinese Journal of Medical Genetics 2022;39(2):143-147
OBJECTIVE:
To identify the causative variants in 13 Chinese pedigrees affected with oculocutaneous albinism (OCA) so as to provide genetic counseling and prenatal diagnosis to them.
METHODS:
Thirteen unrelated pedigrees with clinically diagnosed OCA were collected and classified based on the manifestation of skin and eyes. With informed consent obtained from the participants, peripheral blood samples were collected from the probands and their family members for the extraction of genomic DNA. Candidate variants were screened by targeted capture and next generation sequencing, and the results were validated by Sanger sequencing. Prenatal diagnosis was provided to the families upon their subsequent pregnancies.
RESULTS:
Causative variants were detected in all probands, including 10 with compound heterozygotes or homozygotes for TYR gene variants and 3 with compound heterozygotes for OCA2 gene variants. Among these, two variants [TYR: c.650G>C (p.Arg217Pro) and OCA2: c.516-2A>T] were unreported previously. The pathogenicity of the novel TYR: c.650G>C (p.Arg217Pro) variant was verified through bioinformatic analysis and prediction of three dimensional structure of the protein. Prenatal diagnosis was provided to 6 fetuses with a high risk for OCA. Four fetuses were found to be carriers, one did not carry the variants of the proband, and one was affected with OCA.
CONCLUSION
Identification of the pathogenic variants in the 13 probands, including 2 novel ones, has expanded the mutational spectrum of OCA and enabled genetic counseling and prenatal diagnosis for the families.
Albinism, Oculocutaneous/genetics*
;
China
;
Female
;
Genetic Testing
;
Humans
;
Membrane Transport Proteins/genetics*
;
Monophenol Monooxygenase/genetics*
;
Mutation
;
Pedigree
;
Pregnancy
;
Prenatal Diagnosis
4.Non-invasive prenatal detection of ocutaneous albinism type I based on cfDNA barcode-enabled single-molecule test.
Conghui WANG ; Chen CHEN ; Xiaofeng WANG ; Xuechao ZHAO ; Ganye ZHAO ; Li'na LIU ; Xiangdong KONG
Chinese Journal of Medical Genetics 2021;38(4):317-320
OBJECTIVE:
To assess the value of non-invasive prenatal testing based on cfDNA barcode-enabled single-molecule test (cfBEST) for the prenatal diagnosis of oculocutaneous albinism type I in a family.
METHODS:
Prenatal genetic diagnosis was carried out by using the cfBEST-based method as well as invasive prenatal diagnosis through amniocentesis. The outcome of the pregnancy was followed up.
RESULTS:
Non-invasive prenatal testing based on cfBEST showed a fetal DNA concentration of 6.6%, with the proportion of c.929_930insC (p.Arg311Lysfs*7) and c.1037-7T>A mutations being 45.7% and 0%, respectively. The posterior frequency of the negative results was 1, suggesting that the fetus carried neither of the two mutations. The result was consistent with that of invasive prenatal diagnosis, and the follow-up found that the fetus was normal.
CONCLUSION
Non-invasive prenatal testing based on cfBEST can be used to detect maternal and fetal genotypes in maternal cell-free DNA, which is clinically feasible.
Albinism
;
Albinism, Oculocutaneous/genetics*
;
Amniocentesis
;
Cell-Free Nucleic Acids
;
Female
;
Humans
;
Pregnancy
;
Prenatal Diagnosis
5.Analysis of genetic variation for a child affected with congenital insensitivity to pain with anhidrosis and albinism by whole genome sequencing.
Chaoyue JIANG ; Shaohua TANG ; Huanzheng LI ; Xueqin XU ; Chunming DING
Chinese Journal of Medical Genetics 2021;38(5):472-476
OBJECTIVE:
To explore the genetic variation of a Chinese family affected with congenital insensitivity to pain with anhidrosis and albinism.
METHODS:
Whole exome sequencing (WES) was carried out to screen potential variants within genomic DNA extracted from the proband and his parents. Whole genome sequencing (WGS) was applied when variants were not found completely. Suspected variants were validated by Sanger sequencing.
RESULTS:
WES has identified a heterozygous c.1729G>C (p.G577R) variant of NTRK1 gene and two heterozygous variants of OCA2 gene, namely c.1363A>G (p.R455G) and c.1182+1G>A. WGS has identified two additional heterozygous variants c.(851-798C>T; 851-794C>G) in deep intronic regions of the NTRK1 gene.
CONCLUSION
The compound heterozygous variants of the NTRK1 gene probably underlay the congenital insensitivity to pain with anhidrosis. And the compound heterozygous variants of the OCA2 gene probably underlay the albinism in the proband. In the case where no variant is detected by WES in the coding region, WGS should be considered to screen potential variants in the whole genome.
Albinism
;
Child
;
DNA Mutational Analysis
;
Hereditary Sensory and Autonomic Neuropathies/genetics*
;
Heterozygote
;
Humans
;
Membrane Transport Proteins
;
Mutation
;
Pedigree
6.Study on TYR gene variant from a pedigree with oculocutaneous albinism.
Yingzhen ZHANG ; Caihong JIN ; Min GUO ; Duofu LI ; Lianming CHAI ; Yang WU ; Donglu LI
Chinese Journal of Medical Genetics 2021;38(9):833-837
OBJECTIVE:
To analyze gene variants in a Chinese pedigree with oculocutaneous albinism (OCA).
METHODS:
Gene sequencing of the proband and his parents was performed using chip capture high-throughput sequencing and Sanger sequencing techniques, and PolyPhen-2, SIFT, MutationTaster, and FATHMM software were used to predict the function of new variants. At the same time,the pedigree and variant genes of 4 albinism patients from this pedigree were analyzed.
RESULTS:
Sequencing results showed that the proband's TYR gene (NM_000372) has c.230G>A (p.Arg77Gln) and c.120_121insG (p.Asp42GlyfsTer35) compound heterozygous variants. The proband's father carries c.230G>A heterozygous variant, and the mother carries c.120_121insG heterozygous variant, indicating that the proband's two variants are from his father and mother. The former is a known missense variant, which can cause abnormal or loss of the original function of the protein polypeptide chain. The latter c.120_121insG(p.Asp42GlyfsTer35) is an unreported frameshift variant of the TYR gene subregion (EX1; CDS1). PolyPhen-2, SIFT, MutationTaster and FATHMM predictions are all prompted as "harmful variants". This variant caused the amino acid encoded protein to terminate prematurely, producing a truncated protein, which eventually formed a 76-amino acid short-type TYR protein instead of the 529-amino acid wild-type TYR protein. Through the pedigree analysis, the four patients in the pedigree are all of the same type of compound heterozygous variants, and the disease-causing genes are all from the patient's parents. They belong to a special form of consanguineous marriage within 5 generations.
CONCLUSION
The compound heterozygous variants of c.230G>A (p.Arg77Gln) and c.120_121insG (p.Asp42GlyfsTer35) of the TYR gene may underlie the disease in this pedigree. The gene sequencing results enrich the variant spectrum of the TYR gene, and has facilitated molecular diagnosis for the patient.
Albinism, Oculocutaneous/genetics*
;
Consanguinity
;
Heterozygote
;
Humans
;
Mutation
;
Pedigree
7.Mutation analysis of two pedigrees with suspected oculocutaneous albinism.
Haiyun YE ; Xiaoping LAN ; Tong QIAO ; Wuhen XU ; Xiaojun TANG ; Yongchen YANG ; Hong ZHANG
Chinese Journal of Medical Genetics 2019;36(3):212-216
OBJECTIVE:
To analyze the clinical presentation and gene of 2 pedigrees with suspected oculocutaneous albinism(OCA), and provide basis for clinical classification, genetic counseling and prenatal diagnosis.
METHODS:
Variants were identified using next-generation sequencing(NGS) and confirmed by Sanger sequencing in 2 pedigrees with suspected OCA. The pathogenicity of the variants was analyzed according to the American College of Medical Genetics and Genomics (ACMG) standard.
RESULTS:
Two compound heterozygous mutations of TYR and OCA2 genes were identified respectively in 2 pedigrees with suspected OCA. The mutation of c.819+3insATATGCC in TYR and the mutation of c.1870G>C in OCA2 are first reported in this study. The pathogenicity analysis shows that two novel mutations are likely pathogenic by combination of prediction of SIFT, Polyphen-2 and Human Splicing Finder.
CONCLUSION
The findings of this study expand the mutational spectrum of OCA. Compound heterozygous mutations in the TYR and OCA2 gene may be responsible for clinical manifestations of 2 pedigrees with suspected OCA.
Albinism, Oculocutaneous
;
DNA Mutational Analysis
;
Female
;
High-Throughput Nucleotide Sequencing
;
Humans
;
Membrane Transport Proteins
;
Monophenol Monooxygenase
;
Mutation
;
Pedigree
;
Pregnancy
8.Piebaldism Associated with Café-au-lait Macules and Intertriginous Freckling: A Case Report and Review of the Literature
Sevgi AKARSU ; Turna İLKNUR ; Ceylan AVCI ; Emel FETIL
Annals of Dermatology 2019;31(5):567-570
We present 9-year-old fraternal twins from a family with piebaldism, having congenital depigmented macules and meeting the diagnostic criteria for neurofibromatosis type 1 (NF1) due to the multiple café-au-lait macules (CALMs) and intertriginous freckling at the same time. It's still a debatable issue that CALMs and intertriginous freckling may be seen in the clinical spectrum of piebaldism or these patients should be regarded as coexistence of piebaldism and NF1. However, based on recent literature and our patients' findings, we suggest that this rare phenotypic variant of piebaldism may not need the careful clinical follow-up and molecular testing for NF1. Besides, it may be suitable that these individuals with piebaldism showing NF1-like clinical phenotypes should be further tested for KIT and SPRED1 gene mutations.
Cafe-au-Lait Spots
;
Child
;
Follow-Up Studies
;
Humans
;
Melanosis
;
Neurofibromatoses
;
Neurofibromatosis 1
;
Phenotype
;
Piebaldism
;
Skin Diseases, Genetic
;
Twins, Dizygotic
9.Diagnosis of a case with oculocutaneous albinism type Ⅲ with next generation exome capture sequencing.
Yuqiang LYU ; Jing HUANG ; Kaihui ZHANG ; Guohua LIU ; Min GAO ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2017;34(1):73-77
OBJECTIVETo explore the clinical and genetic features of a Chinese boy with oculocutaneous albinism.
METHODSThe clinical features of the patient were analyzed. The DNA of the patient and his parents was extracted and sequenced by next generation exome capture sequencing. The nature and impact of detected mutation were predicted and validated.
RESULTSThe child has displayed strabismus, poor vision, nystagmus and brown hair. DNA sequencing showed that the patient has carried compound heterozygous mutations of the TYRP1 gene, namely c.1214C>A (p.T405N) and c.1333dupG, which were inherited from his mother and father, respectively. Neither mutation was reported previously.
CONCLUSIONThe child has suffered from oculocutaneous albinism type Ⅲ caused by mutations of the TYRP1 gene.
Albinism, Oculocutaneous ; diagnosis ; genetics ; Amino Acid Sequence ; Base Sequence ; Child, Preschool ; Exome ; genetics ; Family Health ; Female ; Heterozygote ; High-Throughput Nucleotide Sequencing ; methods ; Humans ; Male ; Membrane Glycoproteins ; genetics ; Mutation ; Oxidoreductases ; genetics ; Parents
10.Novel KIT Missense Mutation P665S in a Chinese Piebaldism Family.
Yan ZHENG ; Fen LIU ; Yao YANG ; Yanhua LIANG
Annals of Dermatology 2017;29(6):801-803
No abstract available.
Asian Continental Ancestry Group*
;
Humans
;
Mutation, Missense*
;
Piebaldism*

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