1.The application of PCR-SSP with the serology in identification and genotyping of ABO ambiguous blood group.
Yanyan SONG ; Yuxi ZHANG ; Xinrui CAO ; Xiaonan YU ; Wei ZHENG
Chinese Journal of Cellular and Molecular Immunology 2023;39(9):824-827
Objective To investigate the effect of blood group serology and polymerase chain reaction with sequence-specific primers (PCR-SSP) on identification and genotyping of ambiguous ABO blood group. Methods Eighty suspicious ABO blood group samples were identified by serology and polymerase chain reaction with sequence-specific primers (PCR-SSP). The final blood group type and the strategy of the transfusion of each case were determined according to the results of serology and PCR-SSP. Results 40 cases were confirmed to be subtypes, and the remaining 40 cases were normal types with weakened antigens or missing antibodies due to other reasons. The results of molecular genetic blood group typing based on PCR-SSP were 41 cases of subtypes (There were 3 discrepancies between two methods: one was Ael identified by serological methods, while its gene type was O2O2; one was common type O, while its gene type was BO1; one was type A, while its gene type was AB.) and 39 cases of normal ones. Conclusion Genotyping technology combined with serological typing has an important significance in identification of ABO blood groups.
ABO Blood-Group System/genetics*
;
Genotype
;
Polymerase Chain Reaction
;
Antibodies
;
DNA Primers
2.Study of the molecular characteristics of a Bweak phenotype due to a novel c.398T>C variant of the ABO gene.
Yanling YING ; Xiaozhen HONG ; Jingjing ZHANG ; Kairong MA ; Ying LIU ; Xianguo XU ; Ji HE ; Faming ZHU
Chinese Journal of Medical Genetics 2023;40(1):110-113
OBJECTIVE:
To explore the molecular mechanism for an individual with Bweak subtype.
METHODS:
Serological methods were used to identify the proband's phenotype. In vitro enzyme activity test was used to determine the activity of B-glycosyltransferase (GTB) in her serum. The genotype was determined by PCR amplification and direct sequencing of exons 5 to 7 and flanking sequences of the ABO gene. T-A cloning technology was used to isolate the haploids. The primary physical and chemical properties and secondary structure of the protein were analyzed with the ProtParam and PSIPRED software. Three software, including PolyPhen-2, SIFT, and PROVEAN, was used to analyze the effect of missense variant on the protein.
RESULTS:
Serological results showed that the proband's phenotype was Bweak subtype with anti-B antibodies presented in her serum. In vitro enzyme activity assay showed that the GTB activity of the subject was significantly reduced. Analysis of the haploid sequence revealed a c.398T>C missense variant on the B allele, which resulted in a novel B allele. The 398T>C variant has caused a p.Phe133S substitution at position 133 of the GTB protein. Based on bioinformatic analysis, the amino acid substitution had no obvious effect on the primary and secondary structure of the protein, but the thermodynamic energy of the variant protein has increased to 6.07 kcal/mol, which can severely reduce the protein stability. Meanwhile, bioinformatic analysis also predicted that the missense variant was harmful to the protein function.
CONCLUSION
The weak expression of the Bweak subtype may be attributed to the novel allele of ABO*B.01-398C. Bioinformatic analysis is helpful for predicting the changes in protein structure and function.
Female
;
Animals
;
ABO Blood-Group System/genetics*
;
Phenotype
;
Genotype
;
Exons
;
Alleles
3.Serological characteristics of ABO blood group and molecular genetic analysis of a Chinese pedigree with cisAB09 subtype.
Yuanyuan WANG ; Fangnian YANG ; Yuqing SHEN ; Yusong GUO ; Bo JIANG ; Xiaojun YANG
Chinese Journal of Medical Genetics 2023;40(6):750-755
OBJECTIVE:
To explore the serological characteristics of ABO blood group and molecular genetic mechanism for a Chinese pedigree with cisAB09 subtype.
METHODS:
A pedigree undergoing ABO blood group examination at the Department of Transfusion, Zhongshan Hospital Affiliated to Xiamen University on February 2, 2022 was selected as the study subjects. Serological assay was carried out to determine the ABO blood group of the proband and his family members. Activities of A and B glycosyltransferases in the plasma of the proband and his mother were measured with an enzymatic assay. Expression of A and B antigens on the red blood cells of the proband was analyzed by flow cytometry. Peripheral blood samples of the proband and his family members were collected. Following extraction of genomic DNA, exons 1 to 7 of the ABO gene and their flanking introns were sequenced, and Sanger sequencing of exon 7 was carried out for the proband, his elder daughter and mother.
RESULTS:
The results of serological assay suggested that the proband and his elder daughter and mother had an A2B phenotype, whilst his wife and younger daughter had an O phenotype. Measurement of plasma A and B glycosyltransferase activity suggested that the titers of B-glycosyltransferase activity were 32 and 256 for the proband and his mother, which were respectively below and above that of A1B phenotype-positive controls (128). Flow cytometry analysis showed that the expression of A antigen on the red blood cell surface of the proband has decreased, whilst the expression of B antigen was normal. Genetic sequencing confirmed that, in addition to an ABO*B.01 allele, the proband, his elder daughter and mother have harbored a c.796A>G variant in exon 7, which has resulted in substitution of the methionine at 266th position of the B-glycosyltransferase by valine and conformed to the characteristics of ABO*cisAB.09 allele. The genotypes of the proband and his elder daughter were determined as ABO*cisAB.09/ABO*O.01.01, his mother was ABO*cisAB.09/ABO*B.01, and his wife and younger daughter were ABO*O.01.01/ABO*O.01.01.
CONCLUSION
The c.796A>G variant of the ABO*B.01 allele has resulted in an amino acid substitution p.Met266Val, which probably underlay the cisAB09 subtype. The ABO*cisA B.09 allele encodes a special glycosyltransferase which can synthesize normal level of B antigen and low level of A antigen on the red blood cells.
Humans
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ABO Blood-Group System/genetics*
;
Pedigree
;
East Asian People
;
Genotype
;
Phenotype
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Alleles
;
Glycosyltransferases/genetics*
;
Molecular Biology
4.Serological Characteristics of Subtype A Caused by New A Allele Mutation and a Family Survey.
Fang QIU ; Qin-Li DING ; Jiao ZOU ; Li-Ping ZOU ; Yu CHEN ; Ying ZHU
Journal of Experimental Hematology 2023;31(2):509-512
OBJECTIVE:
In this study, the results of forward and reverse blood typing of a male patient diagnosed as bronchiectasis were inconsistent, which were type O and type A respectively. Multiple experiments including genotyping and sequencing and family investigation were carried out to determine the subtype of ABO blood group and explore the serological characteristics of this subtype.
METHODS:
Standard serological techniques were used to conduct forward and reverse typing, reverse blood typing enhancement test, H antigen identification, absorption-elution test, salivary blood group substances test, and PCR-SSP method for ABO genotyping and exon 6 and 7 sequencing.
RESULTS:
The proband's blood group was type O by forward typing, but antigen A could be detected by absorption-elution test, anti-A1 could be detected by reverse blood typing enhancement test, it was found that there was substance H but no substance A in saliva, and the serological characteristics were consistent with Ael subtype. Gene sequencing analysis showed that there was a c.625T>G base substitution on the basis of A102, which had never been reported before. Family survey showed that c.625T>G base substitution appeared in three generations of the family.
CONCLUSION
In this study, a new subtype A with Ael serological characteristics caused by c.625T>G mutation was identified. c.625T>G base substitution results in the weakening of A antigen, and this mutation can be stably passed down to future generations.
Humans
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Male
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Genotype
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Phenotype
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Alleles
;
Mutation
;
ABO Blood-Group System/genetics*
5.Identification of a novel FUT1 allele in a Chinese individual featuring para-Bombay phenotype.
Qiang LI ; Kaihua XIANG ; Chunhua LIU ; Gang DENG ; Liefang NI ; Yanjie HUA ; Shifang YU
Chinese Journal of Medical Genetics 2022;39(1):89-93
OBJECTIVE:
To explore the genetic basis for an individual with a para-Bombay phenotype.
METHODS:
A proband with mismatched forward and reverse serotypes for the ABO blood group was identified. Weakly expressed ABH blood type antigen on the surface of red blood cells was verified by absorption and release test, and the blood group substances in saliva was detected by sialic acid test. Exons 6 and 7 of the ABO gene and exons of the FUT1 and FUT2 genes were subjected to direct sequencing.
RESULTS:
The proband was found to be of O type by forward ABO serotyping and AB type by reverse ABO serotyping, though H and substance A and B were detected in her saliva. DNA sequencing revealed that she has harbored c.35C/T, c.328G/A, and c.504delC compound heterozygous variants of the FUT1 gene. Haploid analysis showed that her FUT1 genotype was h328A/h35T+504delC, which has been uploaded to the NCBI website (No. MW323551).
CONCLUSION
The para-Bombay phenotype of the proband may be attributed to the novel compound heterozygous variants including c.504delC of the FUT1 gene, which may affect its function by altering the activity of FUT1 glycotransferase.
ABO Blood-Group System/genetics*
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Alleles
;
China
;
Female
;
Fucosyltransferases/genetics*
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Genotype
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Humans
;
Phenotype
6.Molecular analysis of 23 cases of B subgroup.
Jinhui XIE ; Shuangyu LI ; Mengli XUE ; Lina WU ; Ying ZHAO ; Xian HUANG ; Jinghui CHONG ; Wei WANG ; Zheng DONG ; Bo SUN ; Tongtong LI ; Shiping AN ; Lixin LI
Chinese Journal of Medical Genetics 2022;39(5):546-547
OBJECTIVE:
To explore the molecular reasons of weak expression of B antigen on the red cell.
METHODS:
Serological test for blood group was carried out, including red cell and plasma grouping, and anti-A1 and anti-H testing, and confirming weak A or B antigens by adsorption and elution. Exons 1-7 were sequenced directly, and one of them was cloned and sequenced.
RESULTS:
All of the 23 samples showed the weak B antigen by serological method. The alleles of the subgroups were identified by DNA sequencing, including 2 Bel subgroup, 4 B3 subgroup, 14 Bw subgroup, 2 CisAB subgroup and a novel allele. The novel allele showed a nucleotide substitution 662G>A in the exon 7, and the sequence was submitted to Blood Group Antigen Gene Mutation Database, and the novel allele was named Bel10.
CONCLUSION
Nucleotide substitution in exon results in blood subgroup, which showed that the antigens were weakened, and Bw phenotype was the most frequently subgroup.
ABO Blood-Group System/genetics*
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Alleles
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Exons
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Genotype
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Humans
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Nucleotides
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Phenotype
7.The Advances and Application of ABO Blood Group Genotyping Technology --Review.
Hui LI ; Chen-Chen FENG ; Qing CHEN
Journal of Experimental Hematology 2022;30(2):622-626
The ABO blood group system is the most important blood group system in clinical transfusion. Serological technology is a routine method for the identification of ABO blood groups, however, which have some limitations in the identification of complicated ABO samples with weakened antigens or antibodies, abnormal plasma proteins, polyagglutination, or cold agglutinin, etc. With the development of molecular biology technology, ABO blood group gene was cloned, and ABO blood group genotyping technology based on DNA was established. The genotyping technologies with different throughputs such as PCR-SSP, Droplet-AS-PCR, PCR-RFLP, PCR-SBT, SNaPshot, MALDI-TOF MS and NGS have emerged. Genotyping has overcome the limitations of serology, and has become an indispensable method to solve difficult blood type, providing strong support for the correct identification of ABO blood group, and providing guarantee for precision blood transfusion. This review summarizes the progress and application of ABO blood group genotyping methods.
ABO Blood-Group System/genetics*
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Blood Grouping and Crossmatching
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Genotype
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Humans
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Polymerase Chain Reaction/methods*
;
Technology
8.Genetic identification and sequence analysis of three individuals of rare ABO variant Bw subgroup.
Jingsi CHEN ; Wenjing YUAN ; Bingbing HE ; Suiyong ZHU ; Jiajin LIN
Chinese Journal of Medical Genetics 2022;39(9):1021-1024
OBJECTIVE:
To identify and analysis three ABO variant Bw subtypes.
METHODS:
Serological assays were carried out to identify the ABO blood group of the proband. ABO gene was identified by Sanger sequencing.
RESULTS:
The genotype of three individuals are ABO*Bw.11/0.01.02, ABO*Bw.12/0.01.01, ABO*Bw.34/A1.02, receptively. Sequencing results showed that there were c.695T>C, c.278C>T, c.889G>A, resulting in variants in Leu232Pro, Pro93Leu and Glu297Lys, receptively.
CONCLUSION
Bw11, Bw12 and Bw34 subgroups were identified, and gene testing can be used as a supplement to determine the ABO blood group subtypes.
ABO Blood-Group System/genetics*
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Alleles
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Blood Grouping and Crossmatching
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Exons
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Genotype
;
Humans
;
Phenotype
;
Sequence Analysis
9.Analysis of an ABO subtype with a novel variation.
Xinming WU ; Fangyuan JI ; Ni HUO ; Linhai ZHANG ; Liping LIU ; Yong YAO
Chinese Journal of Medical Genetics 2022;39(10):1158-1160
OBJECTIVE:
To analyze the molecular characteristics of a ABO subgroup.
METHODS:
The ABO phenotype was determined with the tube method. Exons of the ABO gene were analyzed by Sanger sequencing, and haplotypes of exons 6 and 7 were analyzed by cloning sequencing.
RESULTS:
By forward typing, the red blood cells showed 3+ agglutination reaction with anti-A and 4+ agglutination with anti-B. A weak reaction with A1 cells and no agglutination reaction with B, O cells by the reverse typing. Sequencing results showed heterozygosity including c.297A>G, c.467C>T, c.526C>G, c.608A>G, c.657C>T, c.703G>A, c.796C>A, c.803G>C, c.930G>A. Cloning sequencing revealed a c.608A>G variant in the A allele compared with the ABO*A1.02.
CONCLUSION
A new variant site of subtype A of c.608G variation has been identified.
ABO Blood-Group System/genetics*
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Alleles
;
Exons
;
Genotype
;
Heterozygote
;
Phenotype
10.Para-Bombay phenotype due to bi-allelic heterozygous base deletions of FUT1 gene.
Ziyi HE ; Yingming HU ; Xianguo XU ; Yuanjun WU ; Siping CUI
Chinese Journal of Medical Genetics 2022;39(11):1290-1293
OBJECTIVE:
To explore the genetic mechanism underlying a case with para-Bombay phenotype.
METHODS:
The ABO and Lewis phenotype were identified with serological methods. The coding regions of exons 6 and 7 of the ABO and FUT1 genes were amplified with PCR and directly sequenced. Haploid sequence analysis was carried out on the variant sites of the FUT1 gene.
RESULTS:
Serological analysis confirmed that the proband has a rare para-Bombay phenotype. Direct sequencing revealed that he was a B.01/O.01.02 heterozygote for the ABO gene, and had heterozygous deletion for the 768 and 881-882 sites of the FUT1 gene. Further haploid analysis showed that the c.881_882delTT deletion has occurred in one haploid while c.768delC was present in the other haploid. The proband was therefore determined as a FUT1*01N.13/01N.20 heterozygote, which have resulted in frameshift in polypeptide chain p.Phe294Cysfs*40 and p.Val257Phefs*23, respectively.
CONCLUSION
A rare bi-allelic heterozygous deletion of para-Bombay phenotype has been identified in a blood donor. The c.881_882delTT and c.768delC deletions may decrease the activity of α-1,2-fucosyltransferase.
Animals
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Male
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ABO Blood-Group System/genetics*
;
Alleles
;
Fucosyltransferases/genetics*
;
Genotype
;
Heterozygote
;
Mutation
;
Phenotype
;
Humans

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