1.Analysis of risk factors for multidrug resistance in patients with ventilator-associated pneumonia complicated by prolonged invasive mechanical ventilation in the ICU
Tongtong HU ; Yongwu CHEN ; Zhicheng HU
China Pharmacy 2025;36(16):2051-2056
OBJECTIVE To analyze the risk factors for multidrug-resistant organism (MDRO) infection in patients with prolonged invasive mechanical ventilation (IMV) complicated by ventilator-associated pneumonia (VAP) in the intensive care unit (ICU), thus providing a reference for improving the clinical effect of VAP treatment in this region. METHODS A retrospective analysis was performed on the clinical data of patients who were admitted to the ICU in Shexian Branch of the Second Affiliated Hospital of Zhejiang University School of Medicine (hereinafter referred to as “our hospital”) from October 2022 to February 2025, received prolonged IMV, and developed VAP. The distribution and drug resistance of pathogens were statistically analyzed. Patients were divided into the MDRO group and the non-MDRO group according to whether an MDRO infection occurred. Univariate analysis and multivariate Logistic regression analysis were used to screen independent risk factors for MDRO infection. RESULTS A total of 281 pathogenic strains were cultured from 97 patients, including 262 Gram-negative bacteria (93.24%), 9 Gram-positive bacteria (3.20%), and 10 fungi (3.56%). The main Gram-negative bacteria were Pseudomonas aeruginosa, Klebsiella pneumoniae subspecies pneumoniae, and Acinetobacter baumannii. The former two showed high resistance rates (all≥25%) to common antibiotics such as imipenem, while A. mail:64375689@qq.com baumannii demonstrated high resistance to most antimicrobial agents. The main Gram-positive bacteria were Staphylococcus aureus subspecies aureus and S. haemolyticus, which were resistant to multiple antibiotics such as clindamycin (resistance rates all>30%). Among 281 pathogenic strains, 121 were MDRO, 62 were resistant to carbapenems, and 33 produced extended-spectrum β-lactamases. The serum albumin<28 g/L, ICU stay≥14 days, and use of benzodiazepines were independent risk factors for MDRO infection in patients with prolonged IMV and VAP in our hospital’s ICU (odds ratios were 3.289, 2.991 and 2.680, 95% confidence intervals were 1.183-9.144, 1.021-8.765, and 1.012- 7.094, respectively, P<0.05). CONCLUSIONS Pathogens infecting patients with prolonged IMV and VAP in the ICU are mainly Gram-negative bacteria, with P. aeruginosa, K. pneumoniae subspecies pneumoniae and A. baumannii, accounting for a high proportion, and the drug resistance situation is severe. Serum albumin<28 g/L, ICU stay≥14 days, and use of benzodiazepines are independent risk factors for MDRO infection in such patients.
2.CHINA PH ARMACY Volume 33,Number 12,June 30,2022 Semimonthly Table of Contents Construction of total q uality managemen t system of clinica l comprehens ive evaluation of drugs in China
Rui ZHAO ; Ruofei HU ; Xiuyuan SHI ; Aizong SHEN ; Yongwu CHEN ; Fan LI ; Kun ZHAO
China Pharmacy 2022;33(12):1409-1414
OBJECTIVE To provide reference for scientifi c and standardized development of clinical comprehensive evaluation of drugs in China. METHODS Guided by the theory of total quality management (TQM),drawing lessons from the successful experience of the British and German conducting evaluation ,combining with plan-do-check-act cycle and other quality management methods and tools ,drug clinical comprehensive evaluation of total quality management system was constructed in accordance with the requirements for our country related policy and local practice. RESULTS & CONCLUSIONS To construct total quality management system of clinical comprehensive evaluation of drugs in China from 5 aspects of organization system ,management process,assessment system ,evaluation and supervision platform ,support and guarantee mechanism. The organization system included national ,provincial and medical institutions ;management process should focus on the key links in the 3 stages of theme selection,evaluation and implementation ,and result transformation and application ;assessment system ,evaluation and supervision platform,support and guarantee mechanism should be established together so as to further improve the scientificity ,rationality, practicality and standardization of total quality management of clinical comprehensive evaluation of drugs. The development of total quality management is an effective starting point to promote the continual improvement of the drug clinical comprehensive evaluation;relevant government departments and the implementation of evaluation of medical institutions should further set up quality management consciousness ,establish report quality feedback mechanism and the results co-constructing and sharing mechanism and strengthen professional personnel training and innovation synergy regulation mode to ensure that the authenticity and reliability of evaluation results.
3.Effects of extracts of Dragon's blood on fibroblast proliferation and extracellular matrix hyaluronic acid.
Dan LI ; Rui HUI ; Yongwu HU ; Yan HAN ; Shuzhong GUO
Chinese Journal of Plastic Surgery 2015;31(1):53-57
OBJECTIVETo investigate the effects of Dragon' s blood extract on proliferation and secret extracellular matrix function of fibroblasts in vitro.
METHODSDragon' s blood was extracted by chloroform, acetoacetic ester, alcohol. Human fibroblast were cultured in vitro in media containing gradient dilutions of Dragon' s blood extracts (0.002, 0.02, 0.2, 2, 20 mg/ml) , which was followed by cell proliferation assessed with MTT assay on 0, 12, 24, 36, 48, 60, 72 h. Under the optimal concentration, the cell growth curves were drawn and the flow cytometry (FCM) was used to determine the changes of cell cycle. On 0, 12, 24, 36, 48, 60, 72 h, the concentration of hyaluronic acid in the supernatant of fibroblast culture was measured by radioimmunoassay.
RESULTS0.2-2 mg/ml Dragon' s blood extracts enhanced the proliferation of fibroblasts in a dose-dependent manner. 2 mg/ml was the optimal dilution of Dragon's blood extract, and it increased the ratio of S cells in cell cycle [(25.80 ± 3.10)%] than control group [(7.50 ± 0.70)%, P < 0.01]. From 12 h to 72 h, in 2 mg/ml Dragon's blood group, concentration of Hyaluronic acid secreted by fibroblasts gradually increased, but were less than control (P < 0.01).
CONCLUSIONSDragon's blood acetoacetic ester extract improved the proliferation of cultured human fibroblasts in vitro, might be beneficial to promote wound healing.
Cell Cycle ; Cell Proliferation ; drug effects ; Culture Media ; chemistry ; Dose-Response Relationship, Drug ; Extracellular Matrix ; Fibroblasts ; cytology ; drug effects ; secretion ; Flow Cytometry ; Humans ; Hyaluronic Acid ; analysis ; secretion ; Plant Extracts ; pharmacology ; Resins, Plant ; Time Factors
4.Effects of Dragon’s blood extracts on fibroblast proliferation and procollagen type III
Dan LI ; Rui HUI ; Yongwu HU ; Yan HAN ; Shuzhong GUO
Chinese Journal of Tissue Engineering Research 2014;(46):7437-7441
BACKGROUND:Dragon’s blood is the main ingredient of traditional medicine prescription for promoting granulation, which has been used in clinical treatment of a variety of refractory wounds and achieved the exact effects. But the Dragon’s blood effect on colagen secretion from normal fibroblasts has not been reported. OBJECTIVE: To investigate the effects of Dragon’s blood extract on the proliferation and secret function of fibroblastsin vitro. METHODS: Dragon’s blood was extracted by extracts chloroform, acetoacetic ester, and alcohol in turn. Normal human fibroblasts were respectively cultured in Dragon’s blood extracts of chloroform, acetoacetic ester, and alcohol, DMEM containing 1% dimethyl sulfoxide, and normal culture medium. Then, the fibroblasts were cultured in vitro in different media containing gradient dilutions of Dragon’s blood extracts (0.002, 0.02, 0.2, 2, 20 g/L), which was folowed by cel proliferation determination assessed with MTT assay. Under the optimal concentration, the cel growth curves were drawn and the flow cytometry was used to determine the changes of cel cycle. The concentration of procolagen type III in the supernatant of the fibroblast culture systems was measured by radioimmunoassay. RESULTS AND CONCLUSION:0.2 g/L-2 g/L dilution of Dragon’s blood extracted by acetoacetic ester enhanced the proliferation of fibroblasts in a dose-dependent manner. The 2 g/L was the optimal dilution of Dragon’s blood extracted by acetoacetic ester, and it increased the ratio of S cels in cel cycle than control group and decreased procolagen type III. These findings indicate that Dragon’s blood acetoacetic ester extract can improve the proliferation of cultured human fibroblastsin vitro, and decrease the secretion of procolagen type III of fibroblasts, and it can be beneficial to improve wound healing and inhibit hypertrophic scar.
5.Influence of hepatic oval cell on the expression of ERK and P38MAPK signaling pathway protein in liver tissue of murine hepatofibrosis
Shengchun WANG ; Yang WANG ; Yongwu HU ; Huiping ZHAO ; Mingyi LIU ; Xing MA
Chinese Journal of General Surgery 2011;26(1):52-57
Objective To observe the influence of hepatic oval cell (HOC) on the expression ERK and P38MAPK signaling pathway protein in liver tissue of murine experimental hepatofibrosis (HF).Method SD rats were fed with 10% ethanol and food with high-fat and low-protein, and were injected subcutaneously with carbontetrachloride once every four days for 8 weeks to establish hepatic fibrosis. HOGs were isolated from male HF rats by collagenase porfusion of the liver. HF rats at 8th week were transplanted with 0. 5 ml HOC suspension medium at a density of 1 × 109 cell /ml via portal vein, and the rats were sacrificed at 8th, 15th, 30th day respectively. Histopathologic changes of liver tissues were observed by HE and Masson. The expression of ERK and P38MAPK signaling pathway protein were determined by Western blotting. Result Hepatofibrosis was reversed and the degree of hyperplasia fibrilcollagen in hepatic fibrosis rats decreased significantly by HOC transplantion. HOC down-regulated the protein expression of Ras, ERK,p-ERK, c-fos, c-jun, STAT3, ALB, FGF-3, PCNA ( F = 91.88,36.28,54.66,93.07,64.76,58.49,52.63,20.45 ,27.03, all P < 0.05 ), up-regulated the protein expression level of HNF-α1, PDGF-Rβ significantly in liver tissues(F = 18.63,25.99,P <0.05). Conclusions HOC improves the degree of hepatofibrosis through inhibiting hyperplasia of collagen fibril in liver tissue of hepatofibrosis rats. With the presence of HOC the expression of c-fos,c-jun,STAT3,5 was not activated by p-P38MAPK. The expression of c-kit and HNF-1α increased and that liver tissue injury alleviated, and hepatofibrosis was improved.
6.Genome organization of the SARS-CoV.
Jing XU ; Jianfei HU ; Jing WANG ; Yujun HAN ; Yongwu HU ; Jie WEN ; Yan LI ; Jia JI ; Jia YE ; Zizhang ZHANG ; Wei WEI ; Songgang LI ; Jun WANG ; Jian WANG ; Jun YU ; Huanming YANG
Genomics, Proteomics & Bioinformatics 2003;1(3):226-235
Annotation of the genome sequence of the SARS-CoV (severe acute respiratory syndrome-associated coronavirus) is indispensable to understand its evolution and pathogenesis. We have performed a full annotation of the SARS-CoV genome sequences by using annotation programs publicly available or developed by ourselves. Totally, 21 open reading frames (ORFs) of genes or putative uncharacterized proteins (PUPs) were predicted. Seven PUPs had not been reported previously, and two of them were predicted to contain transmembrane regions. Eight ORFs partially overlapped with or embedded into those of known genes, revealing that the SARS-CoV genome is a small and compact one with overlapped coding regions. The most striking discovery is that an ORF locates on the minus strand. We have also annotated non-coding regions and identified the transcription regulating sequences (TRS) in the intergenic regions. The analysis of TRS supports the minus strand extending transcription mechanism of coronavirus. The SNP analysis of different isolates reveals that mutations of the sequences do not affect the prediction results of ORFs.
Amino Acid Substitution
;
Base Composition
;
Base Sequence
;
Computational Biology
;
methods
;
Genome, Viral
;
Isoelectric Point
;
Models, Genetic
;
Molecular Sequence Data
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Molecular Weight
;
Open Reading Frames
;
SARS Virus
;
genetics
;
Sequence Analysis
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Transcription, Genetic
7.The C-terminal portion of the nucleocapsid protein demonstrates SARS-CoV antigenicity.
Guozhen LIU ; Shaohui HU ; Yongwu HU ; Peng CHEN ; Jianning YIN ; Jie WEN ; Jingqiang WANG ; Liang LIN ; Jinxiu LIU ; Bo YOU ; Ye YIN ; Shuting LI ; Hao WANG ; Yan REN ; Jia JI ; Xiaoqian ZHAO ; Yongqiao SUN ; Xiaowei ZHANG ; Jianqiu FANG ; Jian WANG ; Siqi LIU ; Jun YU ; Heng ZHU ; Huanming YANG
Genomics, Proteomics & Bioinformatics 2003;1(3):193-197
In order to develop clinical diagnostic tools for rapid detection of the SARS-CoV (severe acute respiratory syndrome-associated coronavirus) and to identify candidate proteins for vaccine development, the C-terminal portion of the nucleocapsid (NC) gene was amplified using RT-PCR from the SARS-CoV genome, cloned into a yeast expression vector (pEGH), and expressed as a glutathione S-transferase (GST) and Hisx6 double-tagged fusion protein under the control of an inducible promoter. Western analysis on the purified protein confirmed the expression and purification of the NC fusion proteins from yeast. To determine its antigenicity, the fusion protein was challenged with serum samples from SARS patients and normal controls. The NC fusion protein demonstrated high antigenicity with high specificity, and therefore, it should have great potential in designing clinical diagnostic tools and provide useful information for vaccine development.
Antigens, Viral
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immunology
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Cloning, Molecular
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Enzyme-Linked Immunosorbent Assay
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Genetic Vectors
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Genome, Viral
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Humans
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Nucleocapsid Proteins
;
genetics
;
immunology
;
Recombinant Fusion Proteins
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genetics
;
isolation & purification
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metabolism
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SARS Virus
;
genetics
;
immunology
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Yeasts
;
genetics
8.Complete genome sequences of the SARS-CoV: the BJ Group (Isolates BJ01-BJ04).
Shengli BI ; E'de QIN ; Zuyuan XU ; Wei LI ; Jing WANG ; Yongwu HU ; Yong LIU ; Shumin DUAN ; Jianfei HU ; Yujun HAN ; Jing XU ; Yan LI ; Yao YI ; Yongdong ZHOU ; Wei LIN ; Hong XU ; Ruan LI ; Zizhang ZHANG ; Haiyan SUN ; Jingui ZHU ; Man YU ; Baochang FAN ; Qingfa WU ; Wei LIN ; Lin TANG ; Baoan YANG ; Guoqing LI ; Wenming PENG ; Wenjie LI ; Tao JIANG ; Yajun DENG ; Bohua LIU ; Jianping SHI ; Yongqiang DENG ; Wei WEI ; Hong LIU ; Zongzhong TONG ; Feng ZHANG ; Yu ZHANG ; Cui'e WANG ; Yuquan LI ; Jia YE ; Yonghua GAN ; Jia JI ; Xiaoyu LI ; Xiangjun TIAN ; Fushuang LU ; Gang TAN ; Ruifu YANG ; Bin LIU ; Siqi LIU ; Songgang LI ; Jun WANG ; Jian WANG ; Wuchun CAO ; Jun YU ; Xiaoping DONG ; Huanming YANG
Genomics, Proteomics & Bioinformatics 2003;1(3):180-192
Beijing has been one of the epicenters attacked most severely by the SARS-CoV (severe acute respiratory syndrome-associated coronavirus) since the first patient was diagnosed in one of the city's hospitals. We now report complete genome sequences of the BJ Group, including four isolates (Isolates BJ01, BJ02, BJ03, and BJ04) of the SARS-CoV. It is remarkable that all members of the BJ Group share a common haplotype, consisting of seven loci that differentiate the group from other isolates published to date. Among 42 substitutions uniquely identified from the BJ group, 32 are non-synonymous changes at the amino acid level. Rooted phylogenetic trees, proposed on the basis of haplotypes and other sequence variations of SARS-CoV isolates from Canada, USA, Singapore, and China, gave rise to different paradigms but positioned the BJ Group, together with the newly discovered GD01 (GD-Ins29) in the same clade, followed by the H-U Group (from Hong Kong to USA) and the H-T Group (from Hong Kong to Toronto), leaving the SP Group (Singapore) more distant. This result appears to suggest a possible transmission path from Guangdong to Beijing/Hong Kong, then to other countries and regions.
Genome, Viral
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Haplotypes
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Humans
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Mutation
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Open Reading Frames
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Phylogeny
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SARS Virus
;
genetics
9.The structure analysis and antigenicity study of the N protein of SARS-CoV.
Jingqiang WANG ; Jia JI ; Jia YE ; Xiaoqian ZHAO ; Jie WEN ; Wei LI ; Jianfei HU ; Dawei LI ; Min SUN ; Haipan ZENG ; Yongwu HU ; Xiangjun TIAN ; Xuehai TAN ; Ningzhi XU ; Changqing ZENG ; Jian WANG ; Shengli BI ; Huanming YANG
Genomics, Proteomics & Bioinformatics 2003;1(2):145-154
The Coronaviridae family is characterized by a nucleocapsid that is composed of the genome RNA molecule in combination with the nucleoprotein (N protein) within a virion. The most striking physiochemical feature of the N protein of SARS-CoV is that it is a typical basic protein with a high predicted pI and high hydrophilicity, which is consistent with its function of binding to the ribophosphate backbone of the RNA molecule. The predicted high extent of phosphorylation of the N protein on multiple candidate phosphorylation sites demonstrates that it would be related to important functions, such as RNA-binding and localization to the nucleolus of host cells. Subsequent study shows that there is an SR-rich region in the N protein and this region might be involved in the protein-protein interaction. The abundant antigenic sites predicted in the N protein, as well as experimental evidence with synthesized polypeptides, indicate that the N protein is one of the major antigens of the SARS-CoV. Compared with other viral structural proteins, the low variation rate of the N protein with regards to its size suggests its importance to the survival of the virus.
Amino Acid Motifs
;
genetics
;
Amino Acid Sequence
;
Antigens, Viral
;
immunology
;
Base Composition
;
Base Sequence
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Cluster Analysis
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Computational Biology
;
DNA Primers
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Enzyme-Linked Immunosorbent Assay
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Genetic Variation
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Molecular Sequence Data
;
Nucleocapsid Proteins
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genetics
;
immunology
;
metabolism
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Phosphorylation
;
SARS Virus
;
genetics
;
Sequence Analysis, DNA
10.The E protein is a multifunctional membrane protein of SARS-CoV.
Qingfa WU ; Yilin ZHANG ; Hong LÜ ; Jing WANG ; Ximiao HE ; Yong LIU ; Chen YE ; Wei LIN ; Jianfei HU ; Jia JI ; Jing XU ; Jie YE ; Yongwu HU ; Wenjun CHEN ; Songgang LI ; Jun WANG ; Jian WANG ; Shengli BI ; Huanming YANG
Genomics, Proteomics & Bioinformatics 2003;1(2):131-144
The E (envelope) protein is the smallest structural protein in all coronaviruses and is the only viral structural protein in which no variation has been detected. We conducted genome sequencing and phylogenetic analyses of SARS-CoV. Based on genome sequencing, we predicted the E protein is a transmembrane (TM) protein characterized by a TM region with strong hydrophobicity and alpha-helix conformation. We identified a segment (NH2-_L-Cys-A-Y-Cys-Cys-N_-COOH) in the carboxyl-terminal region of the E protein that appears to form three disulfide bonds with another segment of corresponding cysteines in the carboxyl-terminus of the S (spike) protein. These bonds point to a possible structural association between the E and S proteins. Our phylogenetic analyses of the E protein sequences in all published coronaviruses place SARS-CoV in an independent group in Coronaviridae and suggest a non-human animal origin.
Amino Acid Sequence
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Base Sequence
;
Cluster Analysis
;
Codon
;
genetics
;
Gene Components
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Genome, Viral
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Membrane Glycoproteins
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metabolism
;
Membrane Proteins
;
genetics
;
metabolism
;
Molecular Sequence Data
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Phylogeny
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Protein Conformation
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SARS Virus
;
genetics
;
Sequence Alignment
;
Sequence Analysis, DNA
;
Sequence Homology
;
Spike Glycoprotein, Coronavirus
;
Viral Envelope Proteins
;
genetics
;
metabolism

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