1.Establishment and evaluation of risk prediction model for the esophageal cancer via whole transcriptome analysis
Yangbo FENG ; Yanlu XIONG ; Jinbo ZHAO ; Jie LEI ; Shaowei XIN ; Tianyun QIAO ; Yongsheng ZHOU ; Xiao ZHANG ; Tao JIANG ; Yong HAN
Chinese Journal of Clinical Thoracic and Cardiovascular Surgery 2023;30(04):578-585
Objective To establish the gene-based esophageal cancer (ESCA) risk score prediction models via whole transcriptome analysis to provide ideas and basis for improving ESCA treatment strategies and patient prognosis. Methods RNA sequencing data of esophageal squamous cell carcinoma (ESCC), esophageal adenocarcinoma (EAC) and adjacent tissues were obtained from The Cancer Genome Atlas database. The edgeR method was used to screen out the differential genes between ESCA tissue and normal tissue, and the key genes affecting the survival status of ESCC and EAC patients were initially identified through univariate Cox regression analysis. The least absolute shrinkage and selection operator regression analysis and multivariate Cox regression analysis were used to further screen genes and establish ESCC and EAC risk score prediction models. Results The risk score prediction models were the independent prognostic factors for ESCA, and the risk score was significantly related to the survival status of patients. In ESCC, the risk score was related to T stage. In EAC, the risk score was related to lymph node metastasis, distant metastasis and clinical stage. The constructed nomogram based on risk score showed good predictive ability. In ESCC, the risk score was related to tumor immune cell infiltration and the expression of immune checkpoint genes. However, this feature was not obvious in EAC. Conclusion 聽 聽The ESCC and EAC risk score prediction models have shown good predictive capabilities, which provide certain inspiration and basis for optimizing the management of ESCA and improving the prognosis of patients.
2.Case report of pseudoelevated serum testosterone in women and literature review
Wei LUO ; Li′an HOU ; Songlin YU ; Ying ZHANG ; Jialei YU ; Yicong YIN ; Li LIU ; Xiaoyue LIANG ; Xin LIU ; Yujun SU ; Shaowei XIE ; Ling QIU ; Liangyu XIA
Chinese Journal of Laboratory Medicine 2022;45(12):1275-1278
Objective:The characteristics of women with false elevated testosterone were analyze and the literature was reviewed to provide reference for clinical laboratory identification of false elevated testosterone.Methods:The characteristics of three patients with false elevated testosterone in Peking Union Medical College Hospital were analyzed retrospectively, and the results of different detection platforms and methods for the determination of testosterone levels were compared. International and domestic literatures related to false elevation of testosterone and detection methods of testosterone were searched for a comprehensive analysis from PUBMED and CNKI.Results:The levels of testosterone in 3 female patients were elevated by immunoassay and normal by mass spectrometry. They were excluded from the diagnosis of hyperandrogenemia. A total of 38 literatures related to testosterone detection were retrieved, of which 9 case reports of pseudohyperandrogenemia, among which 12 cases of pseudohyperandrogenemia were reported in 2 domestic literatures in 2021. All cases were confirmed by liquid chromatography-tandem mass spectrometry (LC-MS/MS). Previous studies have clearly indicated that the result of routine immunoassay in clinical laboratory for the determination of female testosterone have poor correlation with the results of LC-MS/MS, with varying degrees of deviation.Conclusions:Immunoassay tests for female testosterone is susceptible to interference and lead to elevated false results. It is suggested that clinical laboratories evaluate the detection methods used and establish a identification program, and confirm samples with suspected pseudoelevated testosterone elevation using other immune platforms or LC-MS/MS.
3.RIP1-dependent linear and nonlinear recruitments of caspase-8 and RIP3 respectively to necrosome specify distinct cell death outcomes.
Xiang LI ; Chuan-Qi ZHONG ; Rui WU ; Xiaozheng XU ; Zhang-Hua YANG ; Shaowei CAI ; Xiurong WU ; Xin CHEN ; Zhiyong YIN ; Qingzu HE ; Dianjie LI ; Fei XU ; Yihua YAN ; Hong QI ; Changchuan XIE ; Jianwei SHUAI ; Jiahuai HAN
Protein & Cell 2021;12(11):858-876
There remains a significant gap in our quantitative understanding of crosstalk between apoptosis and necroptosis pathways. By employing the SWATH-MS technique, we quantified absolute amounts of up to thousands of proteins in dynamic assembling/de-assembling of TNF signaling complexes. Combining SWATH-MS-based network modeling and experimental validation, we found that when RIP1 level is below ~1000 molecules/cell (mpc), the cell solely undergoes TRADD-dependent apoptosis. When RIP1 is above ~1000 mpc, pro-caspase-8 and RIP3 are recruited to necrosome respectively with linear and nonlinear dependence on RIP1 amount, which well explains the co-occurrence of apoptosis and necroptosis and the paradoxical observations that RIP1 is required for necroptosis but its increase down-regulates necroptosis. Higher amount of RIP1 (>~46,000 mpc) suppresses apoptosis, leading to necroptosis alone. The relation between RIP1 level and occurrence of necroptosis or total cell death is biphasic. Our study provides a resource for encoding the complexity of TNF signaling and a quantitative picture how distinct dynamic interplay among proteins function as basis sets in signaling complexes, enabling RIP1 to play diverse roles in governing cell fate decisions.
Animals
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Apoptosis
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Caspase 8/metabolism*
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GTPase-Activating Proteins/metabolism*
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HEK293 Cells
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Humans
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Mice
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Mice, Knockout
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Necroptosis
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Receptor-Interacting Protein Serine-Threonine Kinases/metabolism*
4.Retrospective analysis of subacute combined degeneration of spinal cord
Shaowei ZHENG ; Ni YANG ; Xin HONG
Journal of Apoplexy and Nervous Diseases 2021;38(12):1085-1087
Objective This study retrospectively analyzed reported cases of subacute combined degeneration of spinal cords(SCD).The purpose of this study was to provide theoretical basis for the prevention,diagnosis,treatment and research of SCD.Methods We searched the PubMed database for terms related to subacute combined degeneration of spinal cords from March 2,2019 to January 1,1990.255 cases were finally included in the study.Results The common causes of SCD were Vitamin B12 deficiency (128 cases),inhaled N-2O (70 cases) and copper deficiency (31 cases).The disease usually happened on middle-ager (44.5±19.9) years old.The course of the disease is relatively long (36.5±85.1) weeks.Limbs hypoesthesia was the most common symptom (73.3%),followed by ataxia (61.6%),and limb motor system could also be involved (35.3%).Autonomic nervous system,cranial nerve,consciousness disorder and cognitive disorder are rare.The patients were often complicated with giant cell anemia (72.5%) and hyperhomocysteinemia (80.9%).Spinal cord MR could show abnormal signal shadow in posterior cord (82.9%),most of which occurred in cervical cord.Conclusion Vitamin B12 deficiency was the most common cause of SCD in adults and N-2O abuse must be paid attention in young people.Most patients of SCD showed peripheral nervous system damage that sensory system damage is common.Abnormal signal shadow in posterior cord of spinal MR was specific for the diagnosis of SCD.Most patients with SCD have a good prognosis after treatment.
5. Risk factors of failed observational treatment of traumatic hemothorax
Shaowei XIN ; Tao WANG ; Xiangbing XIN ; Yong HAN
Chinese Journal of Thoracic and Cardiovascular Surgery 2020;36(1):22-25
Objective:
To identify the risk factors of failed observational treatment of traumatic hemothorax.
Methods:
Clinical data of traumatic hemothorax combined with observational treatment were selected from the data of chest trauma cases admitted to the thoracic surgery department from January 2012 to December 2018. The treatment effect was analyzed, and the risk factors of failed observational treatment were analyzed by multivariate analysis.
Results:
The total failure rate of observational treatment was 59.26%(32/54), and the details of hemothorax volume, length of stay in hospital, pneumothorax and patients with more than 3 rib fractures in the failed conservative treatment group were more than those in the successful treatment group(
6.Risk factors associated with postoperative complications of video-assisted thoracic surgery for traumatic hemothorax
Shaowei XIN ; Tao WANG ; Xiangbing XIN ; Yong HAN
Chinese Journal of Trauma 2020;36(7):619-623
Objective:To investigate the risk factors associated with the complications of video-assisted thoracic surgery (VATS) in the treatment of traumatic hemothorax.Methods:A retrospective case-control study was conducted to analyze the clinical data of 94 patients with traumatic hemothorax undergone VATS treatment in Tangdu Hospital of Air Force Medical University from January 1, 2012 to December 31, 2018. There were 75 males and 19 females, aged from 15-78 years [(45.8±14.6)years]. Postoperative complications occurred in 12 patients (complication group) and not in 82 patients (non-complication group). The following data were analyzed for complication-related risk factors using univariate analysis and Logistic regression analysis, including gender, age, mechanism of injury, pneumothorax and hemothorax, number of fractured ribs, abbreviated injury score (AIS), injury severity score (ISS), time from injury to operation, operation time, rib fixation or not, pulmonary air leakage or not, duration of drainage, postoperative volume of drainage, and postoperative length of hospital stay.Results:The proportion of patients with time from injury to operation (>3 days), duration of drainage and postoperative length of hospital stay in complication group [75%(9/12), (7.8±2.6) days, (10.2±2.7)days] were significantly higher or longer than those in non-complication group [37%(30/82), (5.5±1.6)days, (8.0±2.3)days] ( P<0.05 or 0.01). There were no statistically significant differences between the two groups in gender, age, mechanism of injury, pneumothorax and hemothorax conditions, number of fractured ribs (≥3), AIS, ISS, operation time, rib fixation or not, pulmonary air leakage or not and postoperative volume of drainage ( P>0.05). Logistic regression analysis showed time from injury to operation (>3 days) and pulmonary air leakage were significantly associated with the complications of VATS ( P<0.05). Conclusion:Time from injury to operation (>3 days) and pulmonary air leakage are independent risk factors for the complications of VATS in the treatment of traumatic hemothorax.
7.Research progress in the treatment of traumatic hemothorax
Shaowei XIN ; Xiangbing XIN ; Yangbo FENG ; Tao WANG ; Yong HAN
Chinese Journal of Thoracic and Cardiovascular Surgery 2019;35(7):438-442
Traumatic hemothorax is a common disease in chest trauma .If it is not treated properly and effectively , it will lead to continuous blood loss, clotted hemothorax, empyema and other life-threatening conditions.Because of no universally ac-cepted guide or consensus in the treatment of traumatic hemothorax , clinicians often choose different ways to treat different de-grees and types of traumatic hemothorax according to their habits and experience .This article focus on recent studies on the treatment of traumatic hemothorax , summarize the latest achievements in the field of traumatic hemothorax , provide evidence for clinicians'clinical decision-making, and find the current insufficiency of traumatic hemothorax and the direction for further re-search.
8.Association between herpes simplex virus infection and atrial fibrillation in elderly individuals
Nian LIU ; Shaowei LIU ; Linling LI ; Qianqian ZHAO ; Songnan WEN ; Yanfei RUAN ; Xin LI ; Songnan LI ; Deyong LONG ; Ribo TANG ; Ronghui YU ; Xin DU ; Jianzeng DONG ; Changsheng MA
Chinese Journal of Geriatrics 2018;37(10):1078-1081
Objective To investigate associations of herpes simplex virus(HSV)infection with elevated high-sensitivity C-reactive protein(hsCRP)level and the development of atrial fibrillation(AF) in elderly individuals.Methods Through screening a total of 2,603 individuals,49 patients aged 60 years or over with AF and without structural heart diseases and known risk factors for AF were selected for data collection.Fifty-five elderly healthy control subjects were selected from a population based Chinese Arrhythmia Registry.Baseline characteristics,plasma antibody levels against HSV-1 and-2,and level of hsCRP were analyzed.Results Level of antibodies against HSV-1 was significantly higher in AF patients[(314.5±63.6)mg/L than in control subjects(216.0±50.7) mg/L,P<0.01].Level of antibodies against HSV-2 was significantly higher in AF patients[(400.1±50.7) mg/L than in control subjects (306.3 ± 64.5) mg/L,P < 0.01].Linear regression analysis demonstrated a positive correlation of plasma levels of hsCRP with both anti-HSV-1 and anti-HSV-2 IgG antibodies (r =0.291,0.188,all P < 0.01).In multiple logistic regression analysis,HSV-1 and HSV-2 antibody levels were significantly associated with AF occurrence(OR =1.035 and 1.034,all P <0.01).The optimal cut-off point for predicting AF occurrence was 284.96 mg/L for anti-HSV-1 with sensitivity of 67.3% and a specificity of 92.7%,and was 366.26 mg/L for anti-HSV-2 with a sensitivity of 67.3% and a specificity of 85.5%,respectively.Conclusions The increased plasma levels of anti-HSV-1 and anti-HSV-2 antibodies are significantly associated with AF occurrence in elderly adults.
9.Heat vulnerability assessment in Jinan city: a comparison between residents living in urban centers and urban-fringe areas.
Fangjun WAN ; Zheng XIN ; Lin ZHOU ; Li BAI ; Yongming WANG ; Shaohua GU ; Shouqin LIU ; Mengmeng LI ; Shaowei SANG ; Ji ZHANG ; Qiyong LIU
Chinese Journal of Epidemiology 2014;35(6):669-674
OBJECTIVETo find out the differences in regional characteristics of heat vulnerability between people living in urban centers and urban-fringe areas of Jinan city so as to provide basis for the development of adaptation measures to heat.
METHODSA cross-sectional survey on heat vulnerability was conducted in urban center and urban-fringe areas of Jinan city, using a self-designed questionnaire among 801 residents at the age of 16 years or older in August 2013. Data of 23 indicators related to heat vulnerability were collected and aggregated to 7 dimensions:health and medical insurance, social networks, heat perception and adaptive behavior, economic status, resources, living environment and working environment. An index score was calculated using a balanced weighted average approach for each dimension, ranging from 0 to 1, with the closer to 1 as greater vulnerability.
RESULTSThe scores on heat perception and adaptive behavior, economic status, resources and working environment dimensions for urban-fringe areas were 0.42,0.63,0.55 and 0.62, statistically significantly higher than the urban center area of 0.41,0.51,0.26 and 0.41. Scores of living environment, social networks and health/medical insurance dimensions for urban center area were 0.57,0.49 and 0.31, which were all higher than the urban-fringe areas of 0.50,0.46 and 0.25, with differences statistically significant.
CONCLUSIONResidents living in the urban center might be more vulnerable to heat in terms of living environment, health/medical insurance and social networks while residents living in the urban-fringe areas might more be vulnerable in terms of heat perception and adaptive behavior, economic status, life resources and working environment. These facts indicated that heat vulnerability among residents could be quite different, even at a fine geographic sale. We would thus suggest that intervention strategies on protecting people from heat, should be more targeted.
Adolescent ; Adult ; Aged ; China ; Cross-Sectional Studies ; Female ; Health Status ; Hot Temperature ; Humans ; Male ; Middle Aged ; Surveys and Questionnaires ; Urban Population ; statistics & numerical data ; Young Adult
10.Investigation of a special neutralizing epitope of HEV E2s.
Min YOU ; Lu XIN ; Yi YANG ; Xiao ZHANG ; Yingwei CHEN ; Hai YU ; Shaowei LI ; Jun ZHANG ; Zhiqiang AN ; Wenxin LUO ; Ningshao XIA
Protein & Cell 2014;5(12):950-953
Antibodies, Monoclonal
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chemistry
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immunology
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Antigens, Viral
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chemistry
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genetics
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immunology
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Binding Sites
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Capsid Proteins
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chemistry
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genetics
;
immunology
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Epitopes
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chemistry
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genetics
;
immunology
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Escherichia coli
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genetics
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metabolism
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Gene Expression
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Hepatitis E
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immunology
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prevention & control
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virology
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Hepatitis E virus
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chemistry
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immunology
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Humans
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Molecular Docking Simulation
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Mutagenesis, Site-Directed
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Peptide Mapping
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Protein Binding
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Recombinant Proteins
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chemistry
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genetics
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immunology
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Viral Hepatitis Vaccines
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administration & dosage
;
biosynthesis


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