1.Clinical and genetic characteristics of 21 children with Rubinstein-Taybi syndrome
Shenghai YANG ; Haoran LIU ; Jiayi LI ; Yu ZHANG ; Ziqin LIU ; Lin WANG ; Xiaoli CHEN ; Shaofang SHANGGUAN
Chinese Journal of Pediatrics 2024;62(4):351-356
		                        		
		                        			
		                        			Objective:To investigate the phenotypes of Rubinstein-Taybi syndrome (RSTS) caused by variants in the CREBBP or EP300 gene, and the correlation between genotype and phenotype.Methods:This case series study was performed on pediatric patients who were referred to the Children′s Hospital of Capital Institute of Pediatrics between January 2013 and July 2022. Both point variant and copy number deletion in CREBBP or EP300 gene were detected by whole exome sequencing, chromosomal microarray analysis, or copy number variation sequencing (CNV-seq). The variant categories were summarized and phenotype numbers were re-visited for RSTS patients. Based on variant types, the patients were divided into different groups (point variant or copy number deletion, EP300 or CREBBP point variant, and loss of function or missense variant). Phenotype counts between different groups were compared using the rank-sum test of two independent samples.Results:A total of 21 RSTS patients were recruited, including 12 males and 9 females, with ages ranging from 1 month to 14 years and 2 months. Among them, 67% (14/21) had point variants, and 33% (7/21) had copy number deletions. Out of these, 20 variants (95%) were de novo. Among 20 patients finishing phenotype count during re-visit, 95% (19/20) of the patients exhibited developmental delays before the age of 2 years. Additionally, 80% (16/20) of the patients had distinctive facial features. Considering phenotype count, no statistically significant difference was found between point variant (14 cases) and copy number deletion (6 cases) (5.0 (3.0, 7.0) vs. 5.0 (2.5, 5.3), Z=0.75, P=0.452), CREBBP (10 cases) and EP300 gene (4 cases) point variant (5.0 (3.8, 7.0) vs. 4.0 (2.0, 6.0), Z=1.14, P=0.253), and loss of function (9 cases) and missense (5 cases) variant (6.0 (4.5, 7.0) vs. 3.0 (2.5, 5.5), Z=1.54, P=0.121). Conclusions:Patients with RSTS primarily exhibit developmental delays in early childhood. Specific facial features serve as suggested signs of genetic testing. However, no significant genotype-phenotype correlation is found.
		                        		
		                        		
		                        		
		                        	
2.The chemical reprogramming of unipotent adult germ cells towards authentic pluripotency and de novo establishment of imprinting.
Yuhan CHEN ; Jiansen LU ; Yanwen XU ; Yaping HUANG ; Dazhuang WANG ; Peiling LIANG ; Shaofang REN ; Xuesong HU ; Yewen QIN ; Wei KE ; Ralf JAUCH ; Andrew Paul HUTCHINS ; Mei WANG ; Fuchou TANG ; Xiao-Yang ZHAO
Protein & Cell 2023;14(7):477-496
		                        		
		                        			
		                        			Although somatic cells can be reprogrammed to pluripotent stem cells (PSCs) with pure chemicals, authentic pluripotency of chemically induced pluripotent stem cells (CiPSCs) has never been achieved through tetraploid complementation assay. Spontaneous reprogramming of spermatogonial stem cells (SSCs) was another non-transgenic way to obtain PSCs, but this process lacks mechanistic explanation. Here, we reconstructed the trajectory of mouse SSC reprogramming and developed a five-chemical combination, boosting the reprogramming efficiency by nearly 80- to 100-folds. More importantly, chemical induced germline-derived PSCs (5C-gPSCs), but not gPSCs and chemical induced pluripotent stem cells, had authentic pluripotency, as determined by tetraploid complementation. Mechanistically, SSCs traversed through an inverted pathway of in vivo germ cell development, exhibiting the expression signatures and DNA methylation dynamics from spermatogonia to primordial germ cells and further to epiblasts. Besides, SSC-specific imprinting control regions switched from biallelic methylated states to monoallelic methylated states by imprinting demethylation and then re-methylation on one of the two alleles in 5C-gPSCs, which was apparently distinct with the imprinting reprogramming in vivo as DNA methylation simultaneously occurred on both alleles. Our work sheds light on the unique regulatory network underpinning SSC reprogramming, providing insights to understand generic mechanisms for cell-fate decision and epigenetic-related disorders in regenerative medicine.
		                        		
		                        		
		                        		
		                        			Male
		                        			;
		                        		
		                        			Mice
		                        			;
		                        		
		                        			Animals
		                        			;
		                        		
		                        			Cellular Reprogramming/genetics*
		                        			;
		                        		
		                        			Tetraploidy
		                        			;
		                        		
		                        			Pluripotent Stem Cells/metabolism*
		                        			;
		                        		
		                        			Induced Pluripotent Stem Cells/metabolism*
		                        			;
		                        		
		                        			DNA Methylation
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		                        			Spermatogonia/metabolism*
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		                        			Germ Cells/metabolism*
		                        			
		                        		
		                        	
3.Analysis of the characteristics of SPTB gene variants among 16 children with Hereditary spherocytosis.
Yangyang GE ; Juanjuan LI ; Ye HAN ; Hua XIE ; Shaofang SHANGGUAN ; Qian JIANG ; Xiaoli CHEN ; Rong LIU
Chinese Journal of Medical Genetics 2023;40(3):269-275
		                        		
		                        			OBJECTIVE:
		                        			To analyze the clinical characteristics and spectrum of SPTB gene variants among 16 Chinese children with Hereditary spherocytosis (HS) and explore their genotype-phenotype correlation.
		                        		
		                        			METHODS:
		                        			Sixteen children who were diagnosed with HS at the Affiliated Hospital of Capital Institute of Pediatrics from November 2018 to July 2022 were selected as the research subjects. Genetic testing was carried out by whole exome sequencing. Candidate variants were verified by Sanger sequencing and subjected to bioinformatic analysis and prediction of 3D structure of the protein. Correlation between the SPTB genotypes and clinical phenotypes was analyzed using Chi-squared test.
		                        		
		                        			RESULTS:
		                        			The male-to-female ratio of the HS patients was 6 : 10, with the median age being 7-year-and-10-month. Clinical features of the patients have included anemia, reticulocytosis and gradual onset of splenomegaly. Mild, moderate and severe anemia have respectively occurred in 56.25% (9/16), 31.25% (5/16) and 12.50% (2/16) of the patients. SPTB gene variants were detected in all patients, among which 10 were unreported previously and 7 were de novo in origin. Loss of function (LOF) variants accounted for 93.75% (15/16). Only one missense variant was detected. Eleven, 4 and 1 of the variants had occurred in the repeat domain, CH1 domain, and dimerization domain, respectively. There was no significant correlation between the type or domain of the SPTB gene variants with the clinical features such as severity of anemia (x² = 3.345, P > 0.05). All of the variants were predicted to be pathogenic or likely pathogenic based on the guidelines from the American College of Medical Genetics and Genomics.
		                        		
		                        			CONCLUSION
		                        			Mild to moderate anemia are predominant clinical features of the HS children harboring a SPTB gene variant, for which LOF variants are the main mutational type. The clinical feature of HS is unaffected by the type of the variants.
		                        		
		                        		
		                        		
		                        			Child
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Computational Biology
		                        			;
		                        		
		                        			Genetic Testing
		                        			;
		                        		
		                        			Genomics
		                        			;
		                        		
		                        			Genotype
		                        			;
		                        		
		                        			Spherocytosis, Hereditary/genetics*
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		                        			East Asian People/genetics*
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		                        			Spectrin/genetics*
		                        			
		                        		
		                        	
4.Risk factors and prevention of lower extremity lymphedema after treatment for cervical cancer
Donglin LI ; Shihe HUANG ; Wenfei ZHAO ; Ling YANG ; Xuejing LIU ; Shaofang CHEN ; Xiaoling WANG
Journal of Chinese Physician 2022;24(8):1149-1152
		                        		
		                        			
		                        			Cervical cancer is a common malignant tumor of female reproductive system. The treatment of cervical cancer is based on surgery and radiotherapy (or concurrent chemoradiation). Lower extremity lymphedema (LEL) is a frequent complication after cervical cancer treatment, which significantly affects the quality of life of patients. Both pelvic surgery and radiation for cervical cancer can lead to LEL. The risk factors for LEL are complicated and involving characteristics regarding patient (age, comorbidities, lifestyle, etc.), tumor [International Federation of gynecology and Obstetrics (FIGO) stage, lymph node metastasis, etc.], and treatment (number of resected lymph nodes, removal of circumflex iliac nodes, adjuvant therapy, etc.). Comprehensive measures are proposed to prevent cervical cancer patients from LEL, and further investigations in terms of effectiveness are warranted.
		                        		
		                        		
		                        		
		                        	
5.Short-term clinical study of vitrectomy combined with intraoperative slow-release dexamethasone implantation in the treatment of severe idiopathic macular epiretinal membrane
Jiaoting WEI ; Boshi LIU ; Meng YANG ; Shaofang PANG ; Zetong NIE ; Xiang ZHANG ; Yi SHI ; Wenbo LI ; Bojie HU
Chinese Journal of Ocular Fundus Diseases 2022;38(10):793-798
		                        		
		                        			
		                        			Objective:To observe the efficacy of dexamethasone intravitreal implant (DEX) combined with pars plana vitrectomy (PPV) in eyes with severe idiopathic epimacular membrane (IMEM).Methods:A prospective clinical case study. From December 2018 to May 2021, 24 patients with 25 eyes of severe IMEM diagnosed in Tianjin Medical University Eye Hospital were included in the study. Among them, 7 males had 7 eyes, 17 females had 18 eyes. Age was 57 to 84 years old. The IMEM stage was 3 to 4 examined by spectral domain optical coherence tomography (SD-OCT). All eyes were performed best corrected visual acuity (BCVA) and central macular thickness (CMT) by SD-OCT. The patients were randomly divided into PPV group (11 eyes) and PPV+DEX group (14 eyes). Standard PPV by three-channel 25G was performed. Phacoemulsification, membrane stripping and intraocular lens implantation were combined during the operation. Patients received vitreous injection of 0.7 mg DEX in PPV+DEX group at the end of the operation. At 1 week, 1 month, 3 months and 6 months after operation, the same equipments and methods were used to perform relevant examinations. The changes of BCVA and CMT were compared between the two groups by t test. Results:Compared with before operation, at 1, 3 and 6 months after operation, the BCVA of the eyes in the PPV+DEX group was significantly improved ( t=3.974, 4.639, 4.453), CMT was significantly decreased ( t=2.955, 3.722, 4.364), the differences were statistically significant ( P<0.05); at 3 and 6 months after surgery, the BCVA of the eyes in the PPV group was significantly improved ( t=2.983, 4.436), CMT was significantly decreased ( t=2.983, 3.461), the differences were statistically significant ( P<0.05). Conclusion:In the treatment of severe IMEM, DEX can accelerate the early postoperative visual recovery and reduce CMT.
		                        		
		                        		
		                        		
		                        	
6.Effects of genotypes of one-carbon metabolism (OCM)-related enzyme single nucleotide polymorphisms sites and anti-epileptic drugs on OCM metabolite levels in epileptic patients
Aohan CHEN ; Yinchao LI ; Shaofang ZHU ; Yiran ZHAO ; Wanrong LIN ; Liemin ZHOU
Chinese Journal of Neuromedicine 2022;21(7):657-663
		                        		
		                        			
		                        			Objective:To explore the effects of genotypes of one-carbon metabolism (OCM)-related enzyme single nucleotide polymorphisms (SNPs) sites and anti-epileptic drugs on OCM metabolite levels in epileptic patients, and to screen valproic acid (VPA) teratogenic susceptibility genes.Methods:Three hundred and seventy-two epileptic patients, admitted to our hospital from January 2019 to December 2020, were enrolled in the study; patients taking VPA, levetiracetam (LEV), lamotrigine (LTG) or oxcarbazepine (OXC) for more than 6 months without attack during regular medication were classified as VPA group ( n=95), LEV group ( n=61), LTG group ( n=57) and OXC group ( n=70); firstly diagnosed epileptic patients who had never taken antiepileptic drugs or had not taken antiepileptic drugs in the previous 6 months were assigned into blank control group ( n=89). Plasma folic acid (FA), vitamin B12 (VitB 12) and homocysteine (Hcy) levels were determined by automatic chemiluminescence immunoassay, and genotypes of OCM-related enzyme SNPs sites were detected by Sequenom iPLEX. Results:(1) As compared with LEV group and blank control group, VPA group had significantly decreased FA level and significantly increased Hcy level ( P<0.05). (2) Patients with DNA methyltransferase (DNMT) 3a rs12987326(-178G>A) GA type had significantly higher Hcy level than those with GG type ( P<0.05); patients with DNMT1 rs2288350(82G>C) GC type had significantly higher Hcy level than those with GG type ( P<0.05); patients with DNMT1 rs75616428 (55850G>C) GC type had significantly lower VitB 12 level than those with GG type ( P<0.05). Patients with DNMT1 rs1863771(128G>A) GA+AA type had significantly higher FA level than those with GG type, patients with folate receptor 2 rs2298444(59T>C) CT+CC type had significantly higher Hcy level than those with TT type, patients with 5,10-methylenetetrahydrofolate reductase rs1801131(1298A>C) AC+CC type had significantly higher Hcy level than those with AA type, and patients with DNMT3a rs6722613(2327C>T) CT+TT type had significantly lower VitB 12 level than those with CC type ( P<0.05). Conclusions:Decreased FA and increased Hcy levels can be noted in epileptic patients who used VPA; some gene variations in SNPs of OCM also affect the OCM metabolite levels in epileptic patients. Epileptic patients during pregnancy should avoid using VPA or detecting SNPs genotypes before medication to reduce the incidence of fetal malformation.
		                        		
		                        		
		                        		
		                        	
7.Dietary exposure assessment of phthalic acid esters in Guangzhou residents
Shaofang SONG ; Kuncai CHEN ; Yufei LIU ; Weiwei ZHANG ; Yan LI ; Yuhua ZHANG ; Jie HUANG ; Yanyan WANG ; Xinhong PAN ; Meixia LI
Journal of Public Health and Preventive Medicine 2021;32(4):36-39
		                        		
		                        			
		                        			Objective   To understand  phthalic acid esters pollution of daily consumed food in Guangzhou City,and evaluate the hazard of phthalic acid esters exposure in residents dietary. Methods  Detected the content of phthalic acid esters in 10 types of food by gas chromatography-mass spectroscopy(GC-MS)methods .It combined with a survey on dietary nutrients intake of Guangzhou residents was conducted.Hazard index on the dietary exposure assessment of chemicals in food was applied.   Results  It showed that the highest levels of DBP,DEHP and DIBP,from the mixed diet samples in Guangzhou were 1.256,1.418,0.576 mg/kg respectively;and the exposure level of DBP,DEHP and DIBP were 2.431、5.981、2.408μg/kg.d ;HQ was respectively 0.243、0.125、0.025. HI was 0.393.   Conclusion  The dietary contamination of phthalic acid esters for Guangzhou was kept at a low level.But the pollution of 3 kinds of mixed samples such as meats,eggs,aquatic and products may be a certain risk of health that should attract more attention.
		                        		
		                        		
		                        		
		                        	
8.Application of enteral nutrition combined with high quality nursing in the treatment of severe acute pancreatitis
Shaofang LI ; Chuanyun ZHANG ; Lijuan WANG ; Tao TAO
Chinese Journal of Modern Nursing 2019;25(17):2200-2203
		                        		
		                        			
		                        			Objective? To explore the effect of enteral nutrition(EN) combined with high quality nursing in the treatment of severe acute pancreatitis(SAP). Methods? By convenience sampling, a total of 100 non-surgical SAP patients in the 901 Hospital of the Chinese People's Liberation Army Joint Logistics Support Force from September of 2012 to September of 2015 were selected as subjects and divided into the experimental group(n=50) and control group (n=50) according to random number table. The control group received the parenteral nutrition (PN) support combined with high quality nursing while the experimental group received the EN support combined with high quality nursing. After treatment, the two groups were compared in terms of the improving condition of the nutritional index, change of scores in Acute Physical and Chronic Health EvaluationⅡ (APACHEⅡ) , overall nursing satisfaction and incidence of adverse events. Results? 14 days after treatment, the experimental group was better than the control group in the serum amylase level, serum albumin, fasting blood glucose recovery and APACHE Ⅱ score with statistical difference (P<0.05); the overall nursing satisfaction rate was 92% in the experimental group, higher than the control group with 66% and the difference was statistically significant (P< 0.05); the incidence of complications after intervention in the experimental group was 14%, lower than the control group with 36% and the difference was statistically significant (P<0.05). Conclusions? EN support combined with high quality nursing has important clinical values for SAP patients. It can better alleviate patients' anxiety and stress, improve their diet structure, reduce the incidence of complications to the maximum extent, increase the clinical nursing satisfaction rate, and is worthy of clinical popularization.
		                        		
		                        		
		                        		
		                        	
9.Infraoccipital needle-knife for cervical vertigo.
Shaofang LI ; Manhua HUANG ; Zhuopeng LIN ; Xinze CHEN ; Dongna LIN ; Peng LU ; Qu LU
Chinese Acupuncture & Moxibustion 2017;37(3):297-300
OBJECTIVETo observe the clinical effect differences between infraoccipital needle-knife and massage for cervical vertigo.
METHODSA total of 366 patients with cervical vertigo were randomly assigned into a needle-knife group (186 cases) and a massage group (180 cases). With cases dropping excluded, 183 cases in the needle-knife group and 176 cases in the massage group were included. Needle-knife was used at Fengchi (GB 20), infraoccipitalpoint, etc. in the needle-knife group. The treatment was given for one course, once three days, 5 times as one course. The traditional massage was applied in the massage group for one course, including systematic stroking, kneading, and the application of pressure and plucking, etc., once every two days and 7 times as one course. The dizziness handicap inventory (DHI) score was observed before and after treatment, as well as 3, 6, and 12 months after treatment. The effects were also evaluated.
RESULTSThe total effective rate was 92.3% (169/183) in the needle-knife group, which was better than 85.2% (150/176) in the massage group (<0.05). Compared with those before treatment, the DHI scores at all the observation time points after treatment were improved in the two groups (all<0.05), with better improvements after treatment as well as 3 and 6 months after treatment in the needle-knife group (all<0.05). There was no significant difference in the improvement of DHI scores between the two groups 12 months after treatment (>0.05). The recurrence rate was 10.3% (12/117) in the needle-knife group, and it was 10.7% (11/103) in the massage group 12 months after treatment (>0.05).
CONCLUSIONSInfraoccipital needle-knife achieves apparent effect for cervical vertigo, which is superior to massage in short period.
10.Spatial Variation of Reference Value of Tumor Biomarker : Alpha-L-Fucosidase
Peng LI ; Miao GE ; Congxia WANG ; Weidong MA ; Shaofang YANG ; Qianyi LIN ; Dezhi WEI
Journal of Sun Yat-sen University(Medical Sciences) 2017;38(3):459-467
		                        		
		                        			
		                        			[Objective] To refer a geographical distribution rule of alpha-L-fucosidase (AFU) reference values for the health adults in China via exploring its spatial distribution trend and its correlation with geographical factors.[Methods] A total of 6564 samples of AFU reference values from 66 administrative units in the years 2004-2015 were collected,male and female of which were 3701 cases (56.4%) and 2863 cases (46.3%).A research concerning AFU reference values in whole country were calculated using methods of information content and ridge regression.[Results] AFU reference values for Chinese healthy adults were influenced by geographical factors and presented autocorrelation,and it showed eastern and northern areas were highery than western and southern areas.[Conclusions] AFU reference values have a spatial variation and the regional disparities should be considered in practice.
		                        		
		                        		
		                        		
		                        	
            

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