1.Synchronous Primary Parosteal Osteosarcoma and Primary Mediastinal Germ Cell Tumour with Atypical Mycobacterial Infection – A Rare Phenomenon: A Case Report
Lim CH ; Mohamed-Haflah NH ; Abdullah-Sani MH ; Loh CK ; Abdul-Rahman MR
Malaysian Orthopaedic Journal 2023;17(No.1):188-192
Mediastinal germ cell tumours are a rare group of
extragonadal germ cell tumours with less than 5%
prevalence of all germ cell tumours. Primary mediastinal
germ cell tumours themselves account for 16-36% of the
extragonadal germ cell tumours. Along the spectrum of
osteosarcoma, parosteal osteosarcoma is a welldifferentiated surface osteosarcoma with a prevalence of 4%
of all osteosarcoma. As such synchronous primary parosteal
osteosarcoma and primary mediastinal germ cell tumour are
exceedingly rare. This leads to complexity in determining the
most appropriate chemotherapy for two different types of
tumours and its potential side effects of reduced immunity
leading to potential secondary infection. Here we report a
case of a 16-year-old boy who presented with synchronous
primary osteosarcoma and primary mediastinal germ cell
tumour, complicated with atypical mycobacterial infection
post-operatively. Additionally, we discuss our choice of
chemotherapy and the management of the atypical
mycobacterial infection.
2.The Discovery of Putative Small Molecules via Ligand-based Pharmacophore Modelling Targeting Human Tau Protein for an Effective Treatment of Parkinson’s Disease
Yahaya Sani Najib ; Yusuf Oloruntoyin Ayipo ; Waleed Abdullah Ahmad Alananzeh ; Mustapha Muhammed ; Mohd Nizam Mordi
Malaysian Journal of Medicine and Health Sciences 2023;19(No.6):83-94
Introduction: The human tau protein is a key protein involved in various neurodegenerative disease (NDs) including
Parkinson’s disease (PD). The protein has high tendency to aggregate into oligomers, subsequently generating insoluble mass in the brain. Symptoms of PD include tremor, bradykinesia, rigidity, and postural instability. Currently drugs
for PD treatment are only symptom-targeted while effective therapeutic treatment remains a challenge. The objective
of this study is to identify novel promising anti-PD drugs using computational techniques. Method: ligand-based
(LB) receptor modelling was conducted using LigandScout, validated and subjected to Glide XP docking, virtual
screening, ADMET, and molecular dynamics predictions. Results: The adopted LB modelling generated pharmacophoric features of 5 hydrogen bond donors, 1 aromatic rings, and 7 hydrogen bond acceptors. The validation result
indicated GH score of 0.73 and EF of 36.30 as validation protocols, probing it to be an ideal model. Using 3D query
of the modelling a total of 192 compounds were retrieved from interbioscreen database containing 70,436 natural
compounds. Interestingly, ligands 1, 2, 3, 4 and 5 orderly indicated higher binding affinities to the receptor with
Glide XP docking of -7.451, -7.368, -7.101, -6.878, and -6.789 compared to a clinical drug Anle138b with -4.552
kcal/mol respectively. Furthermore, molecular dynamics and pkCSM pharmacokinetics demonstrated ligands 1, 2, &
4 having better stability and low toxicity profiles compared to the reference. Conclusion: In summary, the study pave
way for discovery of small molecules that could be recommended as adjuvant /single candidate as ant-PD candidates
upon further translational study.
3.Combination of polymyxin B and Aquilaria malaccensis extract enhanced the killing and inhibited the growth of Acinetobacter baumannii and Klebsiella pneumoniae
Nurul ' ; Izzati Mohd Jihadi ; Mohd Hafidz Mahamad Maifiah ; Nusaibah Abdul Rahim ; Muhamad Shirwan Abdullah Sani ; Yumi Zuhanis Has-Yun Hashim ; Khairunnisa Mohd Kamal
Malaysian Journal of Microbiology 2022;18(1):27-36
Aims:
Polymyxins are an important last-line treatment for infections caused by multidrug-resistant Gram-negative bacteria. Nonetheless, the emergence of polymyxin-resistance and the limiting of polymyxin monotherapy urgently demands its optimisation. Aquilaria malaccensis (Agarwood) has been widely used as traditional medicine. Many parts of the plant including leaves exhibit a considerable in vitro antibacterial activity against microbial pathogens. Exploiting A. malaccensis in combination with polymyxins provides a novel strategy in fighting antimicrobial resistance. The objective of this study was to evaluate the combination effects of A. malaccensis extract with polymyxins against Acinetobacter baumannii and Klebsiella pneumoniae.
Methodology and results:
In vitro time-kill studies and GC-MS analysis were performed to evaluate the bacterial killing of polymyxin B and extract combination and analyse chemical compounds of the extract, respectively. The combination of polymyxin B (1 mg/L) and A. malaccensis extract (32 mg/mL and 64 mg/mL) treatments exhibited enhanced bacterial killing compared to polymyxin B alone at 4 h and 24 h. Combination treatments also inhibited the bacterial growth of both A. baumannii and K. pneumoniae observed throughout the 24 h. More than sixty compounds including phytol, 9,12-octadecadienal, fatty acid, alkanes and terpenoids were putatively identified as the compounds that likely contributed to the antibacterial activity.
Conclusion, significance and impact of study
This study was the first to report the potential application of A. malaccensis extract in combination with polymyxin B in treatment against A. baumannii and K. pneumoniae and can be further investigated and optimized for the treatment of bacterial infectious diseases.
Thymelaeaceae
;
Polymyxins
;
Acinetobacter baumannii--immunology
;
Klebsiella pneumoniae--immunology
4.Identification of entomopathogenic fungi Metarhizium anisopliae and Purpureocillium lilacinum from oil palm plantation soils in Universiti Putra Malaysia
Ibrahim Sani ; Syari Jamian ; Siti Izera Ismail ; Norsazilawati Saad ; Sumaiyah Abdullah ; Erneeza Mohd Hata ; Muhammad Amali Kamarudin ; Johari Jalinas
Malaysian Journal of Microbiology 2022;18(1):105-112
Aims:
Insect pests are one of the major constraints of oil palm production in Malaysia. However, synthetic chemical insecticides are the most common method for its control, despite their negative effects on non-target organisms and the development of resistance. Therefore, the present study is aimed to identify novel indigenous isolates of entomopathogenic fungi (EPF) in oil palm soil as part of integrated pest management (IPM) of oil palm insect pests.
Methodology and results:
The potential of EPF were isolated from the soil collected from the oil palm plantation in UPM using a mealworm beetle larva (Tenebrio molitor) as an insect bait. Seven Metarhizium anisopliae and two Purpureocillium lilacinum isolates were identified by morphological characterization (macroscopic and microscopic observation) and molecular identification using internal transcribed spacer (ITS) region (ITS region amplification).
Conclusion, significance and impact of study
To our knowledge, this is the first time P. lilacinum has been found in the soil of an oil palm plantation or any other host in Malaysia. Furthermore, both of the isolates M. anisopliae and P. lilacinum may be potentially considered as biological control candidates for major insect pests in oil palm.
Entomophthorales--genetics
;
Palm Oil
;
Insecticides
5.Levels of Non-Essential (Cd, Pb and Hg) Elements in Muscle Tissues of A. bicolor bicolor, McClelland 1844 from Kedah and A. bengalensis bengalensis, Gray 1831 from Perak and Human Consumption Risks
Malaysian Journal of Health Sciences 2019;17(2):63-72
A study on heavy metals accumulation and human health risk assessment in the consumption of two tropical freshwater eel species (A. bengalensis bengalensis) from the Sungai Perak at Kuala Kangsar, Perak and (A. bicolor bicolor) from the Air Hitam irrigation canal, Kampung Kuala Sanglang, Kedah was carried out. Specimens were examined and analyzed for Pb and Cd concentrations using ICP-MS while the total Hg concentration was measured using a direct mercury analyzer (MA-3000). The range for the total concentrations (µg/g wet wt.) in A. bicolor bicolor were 0.01-0.4 (Cd), 0.03-0.77 (Pb) and 0.36-0.94 (Hg) while for A. bengalensis bengalensis, they were 0.76-1.23 (Cd), 0.01-0.10 (Pb) and 0.27-1.5 (Hg). A. bengalensis bengalensis (Sungai Perak) showed a significant strong relationship between Hg/Pb (r = .771, P < 0.05) and A. bicolor bicolor (Air Hitam irrigation canal) with Cd/Pb (r = -.895, P < 0.05) in muscle tissues and the results indicated Hg and Pb were introduced from point and non-point sources, therefore it is of concern. Interspatial comparison with the findings of previous local and international studies showed both species of freshwater eels accumulated Hg to high levels, exceeding the safe limits stipulated in the Malaysian Food Act of 1984, Food Regulations (1985) and USEPA (1997). However, the Target Hazard Quotient (THQ) and Hazard Index (HI) indicated that both freshwater eel spp. from the studied sites are safe to consume as there is no risk posed from consumption based on the health risk assessment results as Pb, Cd and Hg concentrations were under the permissible limits of nutrient intake.
6.Antibacterial potential of lactic acid bacteria isolated from local pickled Eleiodoxa conferta (kelubi) against selected foodborne pathogens
Nur Ilida Mohamad ; Musaalbakri Abdul Manan ; Norrakiah Abdullah Sani
Malaysian Journal of Microbiology 2018;14(6):490-496
Aims:
Pickled fruits are a popular condiment not only in Malaysia but throughout the world. Lactic acid bacteria (LAB) are known to be able to produce several antibacterial compounds during the pickling process. Pickled Eleiodoxa conferta or kelubi is among the commonly consumed pickled fruits in Malaysia and may be a promising source of LAB. This study was carried out to isolate and identify LAB from local pickled E. conferta and to determine their antibacterial activity against foodborne pathogens.
Methodology and results:
The isolation of LAB was conducted using standard methods and the isolated colonies were preliminarily identified based on their morphology on De Man, Rogosa and Sharpe (MRS) agar, Gram-positive staining characteristics and their catalase-negative reactions and subsequently chosen for identification with polymerase chain reaction (PCR) amplification of the 16S rRNA gene and sequencing. A total of four LAB isolates were successfully isolated and identified: Lactobacillus brevis (LABK1 and LABK2), L. plantarum (LABK3) and Leuconostoc mesenteroides (LABK4). The antibacterial activity of the identified LAB was determined against 10 commonly known foodborne bacterial pathogens using LAB cell cultures by agar spot test method. The antibacterial activity was also evaluated using the cell free supernatant (CFS) of the LAB through agar well diffusion method. All four LAB cultures were able to demonstrate antibacterial activity and inhibited five Gram-positive and five Gram-negative bacterial pathogens.
Conclusion, significance and impact of study
This study demonstrated that the isolated LAB from E. conferta has antibacterial effects against several foodborne pathogens. These LAB strains may have potential as a natural food preservative.
7.Chronic Large Non Healing Ulcer: Non-Tuberculous Mycobacterial Infection of the Laryngopharynx.
Nurfarissa HUSSIN ; Marina MAT BAKI ; Abdullah SANI
Korean Journal of Family Medicine 2017;38(5):303-306
We describe a case of non-tuberculous mycobacterial infection of the larynx in a previously well, immunocompetent young woman. Laryngeal mycobacterial infection is rare and currently accounts for less than 1% of all cases. A diagnostic dilemma often occurs because it may mimic laryngeal carcinoma, chronic laryngitis, or laryngeal candidiasis. This case highlights the importance of considering non-tuberculous mycobacterial infection in the differential diagnosis of laryngeal lesions.
Candidiasis
;
Diagnosis, Differential
;
Female
;
Humans
;
Hypopharynx*
;
Laryngitis
;
Larynx
;
Nontuberculous Mycobacteria
;
Pharynx
;
Ulcer*
8.Prolong Placement of Tracheostomy Tube Causing Unusual Complication
Mohamad Norkahfi R ; Marina MB ; Mawaddah A ; Abdullah Sani M
Medicine and Health 2016;11(2):298-302
Tracheostomy can be associated with numerous complications. Here, we present
a case of large hypertrophic skin of tracheostoma with tracheal granulation tissue
causing malpositioning of tracheostomy tube and airway obstruction, secondary to
prolong placement of a cuff tracheostomy tube due to improper tracheostomy care.
This case illustrates that awareness and knowledge of proper tracheostomy tube
care among medical personnel are very important to avoid any mismanagement
that can cause life-threatening complications.
Tracheostomy
9.A Ten-Year Kuala Lumpur Review on Laser Posterior Cordectomy for Bilateral Vocal Fold Immobility
Azman Mawaddah ; Mat Baki Marina ; Sawali Halimuddin ; Mohd Yunus Mohd Razif ; Sani Abdullah
Malaysian Journal of Medical Sciences 2016;23(4):65-70
Bilateral vocal fold immobility (BVFI) is commonly caused by injury to the recurrent
laryngeal nerve (RLN) and leads to stridor and dyspnea of varying onsets. A retrospective study
was done at the Department of Otorhinolaryngology of Universiti Kebangsaan Malaysia Medical
Centre on laser microsurgical posterior cordectomy for BVFI. The objectives were to identify
the average duration of onset of stridor from the time of insult and to evaluate the outcome of
laser posterior cordectomy as a surgical option. From 1997 to 2007, a total of 31 patients with
BVFI were referred for surgery. Twelve patients had tracheostomy done prior to the procedure,
whereas 19 patients were without tracheostomy. Ten patients were successfully decannulated,
and only 4 patients had complications related to the procedure. The minimum onset of stridor
was 7 months, maximum onset of stridor was 28 years, and the mean onset of stridor was 8.7
years. The commonest complication observed was posterior glottic adhesion following bilateral
posterior cordectomy. Laser endolaryngeal posterior cordectomy is an excellent surgical option
as it enables successful decannulation or avoidance of tracheostomy in patients with BVFI. The
onset of stridor took years after the insult to the recurrent laryngeal nerves.
10.Partial Cricotracheal Resection (PCTR), a RewardingOutcome for Paediatric Subglottic Stenosis : An Early Experience
Goh Bee See ; Roopesh Sankaran ; Marina Mat Baki, Abdullah Sani Mohamed
The Medical Journal of Malaysia 2014;69(1):13-15
This is a retrospective study examining the outcome of
paediatric patients with subglottic stenosis who underwent
partial cricotracheal resection (PCTR) as a primary open
procedure from 2004 to 2012. There were 5 patients
identified aged from 3 to 18 years old. All the subglottic
stenosis were acquired type. All of them were secondary to
prolonged intubation. Three patients were classified as
Myer-Cotton grade III and the other two were Myer-Cotton
grade IV. Two of the patients had concomitant bilateral vocal
cord immobility. All patients underwent two staged PCTR .
All patients underwent two staged PCTR, and one patient
underwent posterior cordectomy apart from partial CTR at
different setting. All patients were successfully
decannulated at various durations postoperatively.
Although this is an early experience in our institution, PCTR
has shown to be effective and safe procedure in patients
with subglottic stenosis especially those with Myer-Cotton
grade III and IV.


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