1.Bioinformatics analysis and validation of the interaction between PML protein and TAB1 protein
Jiacong CHENG ; Zhihui LI ; Yao LIU ; Cheng LI ; Xin HUANG ; Yinxin TIAN ; Fubing SHEN
Journal of Southern Medical University 2024;44(1):179-186
Objective To analyze the interaction between PML protein and TAB1 protein using bioinformatic approaches and experimentally verify the results.Methods Using Rosetta software,a 3D model of TAB1 protein was constructed through a comparative modeling approach;the secondary structure of PML protein was retrieved in the PDB database and its crystal structure and 3D structure were resolved.Zdock 3.0.2 software was used to perform protein-protein docking of PML and TAB1,and the best conformation was extracted for molecular structure analysis of the docking model.The interaction between the two proteins was detected using immunoprecipitation in α-MMC-treated M1 inflammatory macrophages.Results When 6IMQ of PML was used as the docking site,PML protein formed 3 salt bridges,6 hydrogen bonds and 6 hydrophobic interactions with TAB1 proteins;when 5YUF of PML was used as the docking site,PML protein formed 1 hydrogen bond,3 electrostatic interactions and 9 hydrophobic interactions with TAB1 proteins,and both of the docking modes formed good molecular docking and interactions.In the M1 inflammatory macrophages treated with α-MMC for 4 h,positive protein bands of PML and TAB1 were detected in the cell lysates in PML-IP group.Conclusion PML protein can interact strongly with TAB1 protein.
2.Bioinformatics analysis and validation of the interaction between PML protein and TAB1 protein
Jiacong CHENG ; Zhihui LI ; Yao LIU ; Cheng LI ; Xin HUANG ; Yinxin TIAN ; Fubing SHEN
Journal of Southern Medical University 2024;44(1):179-186
Objective To analyze the interaction between PML protein and TAB1 protein using bioinformatic approaches and experimentally verify the results.Methods Using Rosetta software,a 3D model of TAB1 protein was constructed through a comparative modeling approach;the secondary structure of PML protein was retrieved in the PDB database and its crystal structure and 3D structure were resolved.Zdock 3.0.2 software was used to perform protein-protein docking of PML and TAB1,and the best conformation was extracted for molecular structure analysis of the docking model.The interaction between the two proteins was detected using immunoprecipitation in α-MMC-treated M1 inflammatory macrophages.Results When 6IMQ of PML was used as the docking site,PML protein formed 3 salt bridges,6 hydrogen bonds and 6 hydrophobic interactions with TAB1 proteins;when 5YUF of PML was used as the docking site,PML protein formed 1 hydrogen bond,3 electrostatic interactions and 9 hydrophobic interactions with TAB1 proteins,and both of the docking modes formed good molecular docking and interactions.In the M1 inflammatory macrophages treated with α-MMC for 4 h,positive protein bands of PML and TAB1 were detected in the cell lysates in PML-IP group.Conclusion PML protein can interact strongly with TAB1 protein.
3.Prognosis of acute-on-chronic liver failure caused by hepatitis recurrence after withdrawal of nucleos(t)ide analogues in chronic hepatitis B patients with different HBeAg status
Jiacong SHEN ; Xiaopeng LI ; Xiaoyu CHENG ; Yuanmei CHE ; Wan LEI ; Guanlin ZHOU ; Lunli ZHANG
Journal of Clinical Hepatology 2022;38(1):86-90
Objective To investigate the difference in the prognosis of hepatitis B virus-related acute-on-chronic liver failure (HBV-ACLF) caused by hepatitis recurrence after withdrawal of nucleos(t)ide analogues (NUC) and possible causes in HBeAg-positive versus HBeAg-negative chronic hepatitis B (CHB) patients. Methods A total of 108 CHB patients with HBV-ACLF caused by withdrawal of NUC who were admitted to The First Affiliated Hospital of Nanchang University from January 2017 to December 2018 were enrolled, and according to HBeAg status, these patients were divided into HBeAg-positive group with 57 patients and HBeAg-negative group with 51 patients. The two groups were compared in terms of sex, age, clinical manifestation, signs, levels of total bilirubin, direct bilirubin, alanine aminotransferase, aspartate aminotransferase, prothrombin time, activated partial thromboplastin time, prothrombin time/international normalized ratio, and HBV DNA quantification on admission, complications (including hepatic encephalopathy, hepatorenal syndrome, and spontaneous bacterial peritonitis), and prognosis of HBV-ACLF. In addition, 48 CHB patients with continuous NUC antiviral therapy for > 2 years and HBV DNA < 20 IU/mL were enrolled, and the serum level of HBV pgRNA was measured to investigate the possible causes of the difference in the prognosis of HBV-ACLF between the patients with different HBeAg statuses. The two-independent-samples t test was used for comparison of normally distributed continuous data between two groups, and the Kruskal-Wallis H test was used for comparison of non-normally distributed continuous data between two groups; the chi-square test was used for comparison of categorical data. Results For the 108 patients with HBV-ACLF caused by drug withdrawal and recurrence, the HBeAg-positive group had an improvement rate of 49.1% and the HBeAg-negative group had an improvement rate of 74.5%. The HBeAg-negative group had a significantly higher improvement rate than the HBeAg-positive group ( χ 2 =2.811, P =0.006). The HBeAg-positive group had a significantly higher level of HBV DNA than the HBeAg-negative group on admission ( t =-3.138, P =0.002). For the 48 CHB patients who achieved virologic response after long-term antiviral therapy, the HBeAg-positive group had a significantly higher HBV pgRNA load than the HBeAg-negative group ( H =2.814, P =0.049). Conclusion Compared with the HBeAg-positive CHB patients, HBeAg-negative CHB patients have a significantly better improvement rate of HBV-ACLF caused by hepatitis recurrence after withdrawal of NUC antiviral therapy. The difference in baseline HBV pgRNA level may be associated with the difference in the prognosis of HBV-ACLF in patients with different HBeAg statuses.
4.Nicotine Induced Lung Cancer Cells Epithelial-mesenchymal Transition and Promote Its Vitro Invasion Potential
HOU YANXU ; LI XUEBING ; PAN ZHENHUA ; ZU LINGLING ; FAN YAGUANG ; YOU JIACONG ; WANG YULI ; WANG MIN ; CHEN PEIRUI ; SHEN WANG ; ZHOU QINGHUA
Chinese Journal of Lung Cancer 2016;19(4):169-176
Background and objective Our previous study found that nicotine could induce lung cancer cell epithelial-mesenchymal transition (EMT). The aim of this study is to explore the relationship between nicotine-induced EMT and lung cancer invasion and metastasis. Methods Real-time PCR and Western blot were used to detect the expression changes of EMT-related markers, E-cadherin and Vimentin, in A549 lung cancer cells treated with nicotine;hTe transposition ofβ-catenin protein expression was determined by immunolfuorescence;Scratch test and Transwell invasion assay were used to detect the effects of nicotine on lung cancer cell migration and invasion. Results Nicotine can signiifcantly down-regulate the expressional level of E-cadherin mRNA and protein of A549 cells in a manner of dose and time-dependent (P<0.01, P<0.01);Nicotine can signiifcantly up-regulate the expressional level of Vimentin mRNA and protein of A549 cells in a manner of dose and time-dependent (P<0.01, P<0.01);Immunolfuorescence results showed thatβ-catenin protein was signiifcantly transfered to nucleus;Scratch test and Transwell assay showed that Nicotine could remarkably increase the migration and invasion poten-tial of lung cancer cells (P<0.01, P<0.01). Conclusion Nicotine can induce cancer cells EMT, and promote the invasion and metastasis ability of lung cancer cells.
5.MiR-192 Confers Cisplatin Resistance by Targeting Bim in Lung Cancer
ZHANG FANG ; LI YANG ; WU HENG ; QI KANG ; YOU JIACONG ; LI XUEBING ; ZU LINGLING ; PAN ZHENHUA ; WANG YULI ; LI YONGWEN ; LI YING ; WANG MIN ; SHEN WANG ; ZHOU QINGHUA
Chinese Journal of Lung Cancer 2014;(5):384-390
Background and objective Cisplatin is the ifrst-line drug for the chemotherapy of non-small cell lung cancer (NSCLC), but the acquired chemoresistance restricted the effect of its treatment. hTe aim of this study is to validate the miRNAs related to the Cisplatin resistance in lung cancer and elucidate the molecular mechanisms. Methods We performed miRNA microarray and RT-PCR to obtain the aberrant differential expressed miRNAs between A549 and its paired Cisplatin-resistant cell line A549/DDP cells, and then we investigated the biological functions of miR-192, which is the aberrant differen-tial expressed miRNA. Atfer transfection of the miR-192 into A549 cells, we measured the half inhibition concentration (IC50), cell apoptosis of the trasfectant cells, and then we used biological sotfwares and dual-luciferase report assay to explore the target gene of the miR-192, which was further validated by RT-PCR and Western blot. Result MiR-192 was highly over-expressed in A549/DDP cells , whose quantity was 37.59±0.35 fold higher than that in A549 cells. Overexpression of miR-192 in A549 cells signiifcantly conferred resistance to Cisplatin and inhibited apoptosis. By contrast, down-expression of miR-192 in A549/DDP cells remarkably restrained the Cisplatin resistance and induced apoptosis. MiR-192 binded to Bim 3’-UTR and negatively regulated Bim expression at the post-transcriptional level in lung adenocarcinoma cells. Conclusion Our data suggested that miR-192 induced Cisplatin-resistance and inhibited cell apoptosis in lung cancer via negative targeting Bim expression.
6.A cell membrane like biomimetic drug-eluting coronary stent
Dezeng FAN ; Xinhao YAN ; Huijuan BIAN ; Chenshui CAI ; Fuyu SUN ; Jian JI ; Jianping XU ; Qiao JIN ; Jiacong SHEN ; Hong QIU ; Runlin GAO
Chinese Journal of Tissue Engineering Research 2009;13(21):4109-4112
BACKGROUND: The restenosis occurs up to 20%-30% following metal coronary stent implantation. Under the support of the 863 program, the feasibility to treat coronary artery stenosis using a novel drug-eluting stent (DES) has been investigated to reduce restenosis. OBJECTIVE: A drug-eluting stent (rapamycin as drug mode) was implanted into porcine models of coronary stenosis. The safety and efficacy of the drug-eluting stent were observed and compared with bare-metal stent. DESIGN, TIME AND SETTING: A randomized controlled animal experiment was performed in the Fu Wai Hospital for Cardiovascular Disease between November 2003 and April 2004. MATERIALS: A novel bioinspired phospholipid copolymer was synthesized by free radical polymerization of stearyl methacrylate, β-hydroxypropyl methacrylateand 3-(trimethoxysilyl) propylmethacrylate. METHODS: Twenty-one pigs were randomly divided into 3 groups: bare-mental stent, drug-eluting stent, and polymer-coated stent. The treated stents pre-loaded onto a delivery system through the use of crimping instrument were implanted into pig's coronary artery, with 2 stents per pig. MAIN OUTCOME MEASURES: Determination of luminal diameter, luminal area, mean intimal thickness on and between the stents, neointimal area, percentage of luminal area restenosis, and damage index using an image analysis instrument. RESULTS: At 28 days after implantation, there was significant difference in mean intimal thickness on and between the stents, as well as neointimal area, between the DES and bare-metal stent groups (P < 0.05). The neointimal area was reduced by 44.87% in the DES group compared with the bare-metal stent group. No significant difference in percentage of luminal area restenosis was found between the DES and bare-metal stent groups, but P value equaled to 0.053, which was close to 0.05. In addition, no restenosis was found in the DES group. CONCLUSION: Rapamycin DES can markedly resist intravascular intimal hyperplasia and restenosis following stenting.
7.Pilot study of a cell membrane like biomimetic drug-eluting coronary stent.
Dezeng FAN ; Zhiyuan JIA ; Xinhao YAN ; Xiaolei LIU ; Wei DONG ; Fuyu SUN ; Jian JI ; Jianping XU ; Kefeng REN ; Weidong CHEN ; Jiacong SHEN ; Hong QIU ; Runlin GAO
Journal of Biomedical Engineering 2007;24(3):599-602
A novel bioinspired phospholipid copolymer has been synthesized by the radical polymerization of poly2-Methacryloyloxyethylphosphorylcholine (MPC), stearyl methacrylate (SMA), hydroxypropyl methacrylate (HPMA) and trimethoxysilylpropyl methacrylate (TSMA). Contact angle results indicated that the coating surface rearranged to get a more hydrophilic surface at the polymer/water interface. The membrane mimic phosphorylcholine coating surface could resist the platelet adhesion and prolong plasma recalcification time significantly. Rapamycin was used as model drugs to prepare drug-eluting coating. The animal experiments showed that this novel drug-eluting stent could effectively prevent the phenomena of restenosis.
Angioplasty, Balloon, Coronary
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instrumentation
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Animals
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Coated Materials, Biocompatible
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Coronary Restenosis
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prevention & control
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Drug-Eluting Stents
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Female
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Humans
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Male
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Materials Testing
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Methacrylates
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chemistry
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Phosphorylcholine
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analogs & derivatives
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chemistry
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Pilot Projects
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Polymers
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chemistry
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Prosthesis Design
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Random Allocation
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Sirolimus
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chemistry
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Swine
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Swine, Miniature
8.Research development of injectable scaffolds for tissue regeneration.
Yi HONG ; Changyou GAO ; Jiacong SHEN
Journal of Biomedical Engineering 2007;24(2):463-465
Three-dimensional cell scaffolds play an important role in tissue engineering. They can modulate cell response and guide the regeneration of tissues. Injectable scaffolds can mimic the chemical and physical environments of natural extracellular matrix, and can be easily applied in clinic with the merits of minor or nonsurgical operations. Hence, special care should be given to the use of this kind of scaffolds in tissue engineering hydrogels, and composites with other fillers have been used as a basic component to construct the injectable scaffolds. Most of these injectable scaffolds are applied to repair bone and cartilage. Experimental results have development of the injectable scaffolds in recent years. The advantages and disadvantages are discussed with the development of the injectable scaffolds in recent years. The advantages and disadvantages are discussed with the suggestions for future development.
Absorbable Implants
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Biocompatible Materials
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Bone and Bones
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physiology
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Cartilage
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physiology
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Guided Tissue Regeneration
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Humans
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Hydrogels
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Tissue Engineering
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methods
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Tissue Scaffolds
9.A study on cytocompatibility of poly (lactic acid) membrane modified by polymer microspheres with different surface charges.
Da CHEN ; Jian JI ; Jiacong SHEN
Journal of Biomedical Engineering 2005;22(5):966-970
Poly(lactic acid) microspheres with different surface charges have been prepared by using cationic, anionic or nonionic surfactants as the microspheres' surface stabilizers. Embedded with these microspheres, the modified PLA membranes with different surface charges have been obtained. The test of stability by CLSM and the morphological test by SEM confirmed that we obtained the microspheres modified PLA membranes with different surface charges successfully. The chondrocyte compatibility test of these modified PLA membranes showed that the attachment, proliferation and activity of chondrocytes on the positive surface of the modified PLA were better than those of other modified PLA membranes. The positive charge on the surface of PLA membrane could improve the cell-compatibility of PLA well.
Animals
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Animals, Newborn
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Biocompatible Materials
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chemical synthesis
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Cations
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Lactic Acid
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chemical synthesis
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chemistry
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Membranes, Artificial
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Microspheres
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Polyesters
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Polymers
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chemical synthesis
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chemistry
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Rabbits
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Surface-Active Agents
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chemistry
10.Factors controlling the microstructure of collagen-based dermis regeneration scaffold.
Lie MA ; Changyou GAO ; Jiacong SHEN
Journal of Biomedical Engineering 2004;21(2):311-315
The factors controlling the microstructure and properties of collagen-based bioactive artificial dermis are reviewed. The second component, the pore diameter and porosity, the thickness of scaffold, the bioactive factors as well as the cross-linking density that are important parameters of artificial dermis should be carefully researched and designed. Experiment methods controlling these parameters are suggested.
Biocompatible Materials
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chemistry
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Collagen
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chemistry
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Dermis
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cytology
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Humans
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Porosity
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Skin, Artificial
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Tissue Engineering
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methods

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