1.Gene characteristics analysis on Sapovirus from diarrhea cases in Beijing, 2019
Shuang LI ; Zhiyong GAO ; Weihong LI ; Yi TIAN ; Baiwei LIU ; Lingyu SHEN ; Hanqiu YAN ; Lei JIA ; Daitao ZHANG ; Quanyi WANG
Chinese Journal of Epidemiology 2023;44(11):1787-1794
Objective:To understand the gene characteristics of Sapovirus from diarrhea cases in diarrhoeal disease clinics in Beijing.Methods:In 2019, stool samples were collected from diarrhea cases in diarrhoeal disease clinics in Beijing. The samples were used for the detection of nucleic acid of Sapovirus with real-time RT-PCR. Different RT-PCR methods were used for the partial gene segment amplification in the capsid protein VP1 region and the polymerase RdRp region, and sequencing was conducted for amplified positive products. The sequences were aligned with software BioEdit 7.0.9.0 and analyzed with software Mega 6.06.Results:The overall detection rate of Sapovirus was 2.89% (44/1 522), the detection rate in children under 5 years old was 3.34% (18/539) and 2.64% (26/983) in children aged ≥5 years. The capsid protein VP1 region was sequenced in 23 strains belonging to 8 genotypes (GⅠ.2 had 6 strains, GⅠ.1 and GⅡ.3 had 5 strains, respectively, GⅠ.3 and GⅡ.5 had 2 strains, respectively, GⅠ.5, GⅡ.1 and GⅣ.1 had 1 strain, respectively). A total of 16 strains were detected in the cases aged ≥5 years, and the proportion of GⅠ.2 was highest (37.50%, 6/16), and 7 strains were detected in the cases under 5 years old, the proportions of GⅠ.1 and GⅡ.3 were highest (both 42.86%, 3/7); The internal similarity of each genotype was 95.5%-100.0%, and the similarity with the 51 reference strains of human or sewage sources in different years and different countries was 92.2%-100.0%. The polymerase RdRp region was sequenced in 25 strains belonging to 8 genotypes (GⅡ.P3 had 9 strains, GⅠ.P3 had 4 strains, GⅠ.P1, GⅠ.P2 and GⅡ.P1 had 3 strains, respectively, GⅠ.P5, GⅡ.P5 and GⅣ.P1 had 1 strain, respectively). Fifteen strains were detected in the cases aged ≥5 years, and GⅡ.P3 had the highest proportion (40.00%, 6/15). Ten strains were detected in the cases under 5 years old, and the proportions of GⅠ. P1, GⅡ.P1 and GⅡ.P3 were highest (all 30.00%, 3/10); The internal similarity of each genotype was 94.0%-100.0%, and the similarity with the 39 reference strains of human or sewage sources in different years and different countries was 90.2%-99.1%.Conclusions:Sapovirus is one of the pathogens among diarrhea cases in Beijing. The main genome is GⅠ and GⅡ, and the genotypes are diverse and dispersed. The main genotypes of diarrhea cases in people aged ≥5 years and less than 5 years are different.
2.Clinical characteristics of diarrhea among children infected with rotavirus in Beijing, 2011 to 2018
Yi TIAN ; Hanqiu YAN ; Weihong LI ; Baiwei LIU ; Xiaona WU ; Lei JIA ; Quanyi WANG ; Zhiyong GAO
Chinese Journal of Experimental and Clinical Virology 2022;36(6):685-690
Objective:To provide evidence for clinical diagnosis, prevention and control of group A rotavirus (RVA) diarrhea, the clinical characteristics of RVA diarrhea in children in Beijing from 2011 to 2018 were analyzed.Methods:From January 2011 to December 2018, 4 819 stool samples from children under 5 years old with diarrhea were collected monthly from 3 hospitals in Beijing. General information, clinical characteristics and other information of children were collected. RVA was detected by enzyme-linked immunosorbent assay (ELISA), genotype was identified by multiple semi-nested RT-PCR. The Vesikari clinical severity score was used to define the severity of diarrhea in children. Dichotomous unconditional logistic regression was used to analyze clinical symptoms and other differences between RVA positive and negative cases. Chi-square and Fisher direct probability tests were used to compare the composition among different groups.Results:A total of 4 819 fecal samples were collected, 953 were positive for RVA, the positive detection rate was 19.78%. The positive rate of RVA was high in the younger age group, and the incidence was high in winter and spring. RVA-positive children had more risk on diarrhea ≥5 times a day, vomiting symptoms, fever, mild dehydration, and Vesikari score ≥11. The positive rate of RVA in watery stool samples (26.13%, 214/819) and infectious diarrhea cases (42.20%, 265/628) was the highest respectively. There were no significant differences in clinical symptoms, clinical diagnoses and fecal traits among children with different RVA genotypes.Conclusions:The clinical symptoms of RVA diarrhea were severe in children. RVA genotype did not affect the clinical symptoms. Stool traits (watery stools) and Vesikari score can assist physicians in diagnosing RVA diarrhea.
3.Investigation on Norovirus prevalence in catering companies and train station in Beijing during non-epidemic season in 2019
Yang ZHENG ; Lei JIA ; Baiwei LIU ; Zhiyong GAO ; Yi TIAN ; Xiaoli WANG ; Hanqiu YAN ; Quanyi WANG
Chinese Journal of Preventive Medicine 2021;55(7):875-878
Objective:To study the prevalence of Norovirus infection among kitchen workers in Beijing, and the contamination status of Norovirus in catering companies and train station.Methods:A cross-sectional survey was conducted to collect anal swab specimens and environmental specimens from catering companies in 16 districts of Beijing and in 3 big train stations. Norovirus nucleic acid was detected by fluorescence quantitative PCR. The contamination status of Norovirus in the environment and the asymptomatic infection status of kitchen workers was analyzed in this study.Results:A total of 650 catering companies were investigated. 1 302 anal swabs or stool specimens and 2 600 environmental swabs were collected and tested. Among the 644 catering companies out of train stations, 1 290 anal swabs or stool specimens and 2 576 environmental swabs were collected and tested. The asymptomatic infection rate of Norovirus was 0.85% (11/1 290) among kitchen workers of the catering companies out of the train stations, while the positive rate of norovirus contamination in the environment was 0.04% (1/2 576). Norovirus was not detected in the specimens collected from the kitchen workers and the environment of the catering companies in train stations.Conclusion:During the non-epidemic season of Norovirus in 2019, the infection rate of Norovirus among kitchen workers in Beijing is low, and the environment is contaminated by Norovirus.
4.Investigation on Norovirus prevalence in catering companies and train station in Beijing during non-epidemic season in 2019
Yang ZHENG ; Lei JIA ; Baiwei LIU ; Zhiyong GAO ; Yi TIAN ; Xiaoli WANG ; Hanqiu YAN ; Quanyi WANG
Chinese Journal of Preventive Medicine 2021;55(7):875-878
Objective:To study the prevalence of Norovirus infection among kitchen workers in Beijing, and the contamination status of Norovirus in catering companies and train station.Methods:A cross-sectional survey was conducted to collect anal swab specimens and environmental specimens from catering companies in 16 districts of Beijing and in 3 big train stations. Norovirus nucleic acid was detected by fluorescence quantitative PCR. The contamination status of Norovirus in the environment and the asymptomatic infection status of kitchen workers was analyzed in this study.Results:A total of 650 catering companies were investigated. 1 302 anal swabs or stool specimens and 2 600 environmental swabs were collected and tested. Among the 644 catering companies out of train stations, 1 290 anal swabs or stool specimens and 2 576 environmental swabs were collected and tested. The asymptomatic infection rate of Norovirus was 0.85% (11/1 290) among kitchen workers of the catering companies out of the train stations, while the positive rate of norovirus contamination in the environment was 0.04% (1/2 576). Norovirus was not detected in the specimens collected from the kitchen workers and the environment of the catering companies in train stations.Conclusion:During the non-epidemic season of Norovirus in 2019, the infection rate of Norovirus among kitchen workers in Beijing is low, and the environment is contaminated by Norovirus.
5.Investigation of norovirus and rotavirus contamination in ball lettuce sold in Beijing
Hanqiu YAN ; Yanwei CHEN ; Yi TIAN ; Weihong LI ; Baiwei LIU ; Zhiyong GAO ; Quanyi WANG
Chinese Journal of Experimental and Clinical Virology 2020;34(2):151-154
Objective:To investigate the contamination of ball lettuce sold by norovirus and rotavirus in Beijing.Methods:From November 2015 to October 2016, 54 samples were collected at a market stall in Beijing. The potentially existing viruses were eluted and concentrated from the ball lettuce leaves using centrifugation and direct methods corresponding to three kinds of eluants. Norovirus and rotavirus were detected by real time RT-PCR. The partial VP1 gene of norovirus was amplified by semi-nested RT-PCR. The PCR product was sequenced directly, the sequence alignment was performed using the BioEdit 7.0.9.0 software, the phylogenetic tree was constructed with the MEGA 6.06 software.Results:Among 54 pieces of ball lettuce, rotavirus was detected negative, and the detection rate of norovirus was 11.11% (6/54). Of these NoV-positive specimens, 3 (50.0%) were NoV GII, 1 (16.7%) was NoV GI, and 2 (33.33%) were a mix of NoV GI and GII, The detection rates in spring, summer, autumn and winter were 8.3% (1/12), 0.0% (0/8), 28.6% (4/14) and 5.0% (1/20), respectively. One strain was sequenced successfully and identified as GII.3 genotype. The strain shares 100.0% nucleotide identity with strain KY348698 isolated from human in Guangdong in 2014.Conclusions:Human norovirus contamination existed in some ball lettuce sold in Beijing, eating raw unwashed ball lettuce may indicate a risk of viral acute gastroenteritis.
6.Progress on genotyping of norovirus
Lingyu SHEN ; Bo JIANG ; Hanqiu YAN ; Weihong LI ; Zhiyong GAO ; Quanyi WANG
Chinese Journal of Epidemiology 2020;41(11):1927-1932
Norovirus are now recognized as one of the main pathogens causing acute gastroenteritis in both developed and developing countries. However, norovirus are easily mutated and recombined, and have many genotypes. In early studies, norovirus were amplified and identified by amino acid sequence of VP1 region. It was found that norovirus were easily mutated and recombined in or near the overlapping regions of polymerase and capsid. A two regions genotyping method was positively proposed internationally. Depending on the 2 times standard deviation standard method for two regions identification, norovirus polymerase regions can be divided into 10 gene groups and 76 genotypes including 2 tentative gene groups and 16 tentative genotypes. The VP1 region can be divided into 12 gene groups and 53 genotypes including 2 tentative gene groups and 5 tentative genotypes. However, the tentative gene groups and genotypes need to be further identified and reclassified. In this article, characteristics of norovirus sequences, principles of different genotyping methods, methods of sequence amplification, on-line genotyping tools and the latest studies in norovirus genotypes are reviewed and introduced.
7. Analysis on influencing factors for acute gastroenteritis outbreaks caused by norovirus in Beijing, 2014-2018
Baiwei LIU ; Zhiyong GAO ; Lei JIA ; Hanqiu YAN ; Xiaoli WANG ; Xingxing ZHANG ; Weihong LI ; Quanyi WANG
Chinese Journal of Epidemiology 2019;40(10):1274-1278
Objective:
To analyze the influencing factors of acute gastroenteritis outbreaks caused by norovirus in Beijing from 2014 to 2018.
Methods:
Data of acute gastroenteritis events caused by norovirus in Beijing from April 2014 to March 2018 were collected. Unconditional logistic regression model was conducted to identify the risk factors of the outbreaks.
Results:
A total of 765 acute gastroenteritis epidemics caused by norovirus were reported in Beijing, in which 85.88
8.Clinical characteristics and follow-up study of aquaporin-4 antibody negative binocular optic neuritis
Houliang SUN ; Shilei CUI ; Lei LIU ; Chao MENG ; Hanqiu JIANG ; Xiaojun ZHANG ; Jiawei WANG
Chinese Journal of Postgraduates of Medicine 2018;41(4):304-307
Objective To investigate the clinical and imaging features of the aquaporin-4 (AQP4)antibody-negative binocular optic neuritis and to analyze the predictive factors of visual function outcome.Methods Fifty-eight patients with AQP4-negative binocular optic neuritis were reviewed and followed up from January 2014 to December 2015.Patients at baseline and at the end of follow-up were evaluated for visual function and neurological examination.All patients underwent optic nerve and brain MRI, cerebrospinal fluid and routine laboratory tests.Results AQP4 antibody-negative binocular optic neuritis accounted for 9.4%(58/615)of the total optic neuritis in the same period.At baseline, 99 eyes (85.3%,99/116)had best corrected visual acuity<0.1.At the end of follow-up, 31 eyes(26.7%,31/116) had best corrected visual acuity < 0.1. There were 43 cases (74.1%, 43/58) with multi-segment involvement of optic nerve at the baseline.Baseline visual acuity(P=0.005), early treatment response (P=0.011), and segment numbers of optic nerve involvement(P=0.025)were independently associated with end-point outcome of visual function.Forty-nine patients(84.5%,49/58)showed monophasic course in (3.1 ± 0.9) years follow-up period, 7 cases (12.1%, 7/58) had recurrence, and 2 cases (3.4%, 2/58) converted to neuromyelitis optic spectrum disorder (NMOSD). Conclusions AQP4 antibody-negative binocular optic neuritis is common and the recovery of visual function is not satisfied. Baseline visual function and the length of optic lesion in MRI is related to the end-point prognosis. Most patients performs the single phase course during the follow-up period.
9.The clinical analysis of recurrent Tolosa-Hunt syndrome
Houliang SUN ; Shilei CUI ; Hanqiu JIANG ; Xiaojun ZHANG ; Jiawei WANG
Chinese Journal of Postgraduates of Medicine 2017;40(2):157-160
Objective To analyze the clinical features, recurrent characters in patients with recurrent Tolosa-Hunt syndrome (THS). Methods The clinical data of 24 hospitalized patients with recurrent THS from January 2006 to May 2016 were collected The general features, clinical manifestations, disease courses, recurrent features, lab and imaging studies, treatment measures and outcoming of recurrent THS patients was investigated , and compared with 69 patients with first attack THS in corresponding period. Results Recurrent THS patients were 25.8%(24/93) of total THS. The male rate in recurrent group was significantly higher than that in first attack group: 66.7%(16/24) vs. 42.0%(29/69), P<0.05. The involved rate of trigeminal nerves in recurrent group was significantly lower than that in first attack group:16.7%(4/24) vs. 33.0%(23/69), P<0.05. The disease courses were from 3 months to 20 years. The total recurrent frequencies were from 2 to 10 times. The recurrence occurred in the same side in 18 patients, and in contralateral in other 6 patients. The intervals were from 3 months to 6 years, and average intervals were 1.9 years. Two patients recurred in hormone reduction, and 22 patients recurred in hormone withdrawal. All cases received MRI examination. Nineteen patients (79.2%) of them had lesions in cavernous sinus. 16 patients had one side lesions and 3 patients had bilateral lesions. The recurrent patients still had good responds to corticosteroids treatment. Conclusions Recurrences in THS are common, taking place in about 26%total patients, and usually at an interval of months or years from the initial attack. These recurrences may be ipsilateral, contralateral, or rarely, bilateral. Corticosteroids are still effective to recurrent cases.
10. Infection characteristics of patients in acute gastroenteritis outbreaks caused by noroviruses
Zhiyong GAO ; Baiwei LIU ; Liyu HOU ; Hanqiu YAN ; Yi TIAN ; Yanwei CHEN ; Xingxing ZHANG ; Yi ZHANG ; Lei JIA ; Haikun QIAN ; Quanyi WANG
Chinese Journal of Experimental and Clinical Virology 2017;31(1):38-41
Objective:
To analyze the infection characteristics of patients in acute gastroenteritis outbreaks caused by noroviruses.
Methods:
Between April 2014 and March 2016, the clinical data and samples were collected from the patients in acute gastroenteritis outbreaks caused by noroviruses in Beijing. Noroviruses were detected and genotyped using real time RT-PCR, and the infection characteristics of norovirus gastroenteritis were analyzed using the descriptive epidemiological method.
Results:
A total of 1743 clinical diagnosed cases of norovirus gastroenteritis were collected, and children under 12 years old accounted for 77.68% (1354/1743). The detection rate of noroviruses was 73.98% (509/688). The detection rates of noroviruses in fecal, swab and vomitus samples were gradually decreased (

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