1.Spatial lifecourse epidemiology in chronic non-communicable disease research.
Chinese Journal of Epidemiology 2022;43(5):755-760
		                        		
		                        			
		                        			In recent years, the research focus on determinants of chronic non-communicable diseases has shifted from non-spatial factors (e.g., lifestyle behaviors) to spatial factors (e.g., natural and built environments). As the intersection of lifecourse epidemiology and spatial epidemiology, spatial lifecourse epidemiology is a research area in the field of health geography. It combines advanced spatial technologies, including geographic information systems, surveying, remote sensing, location-based services and artificial intelligence, to accurately retrace, measure, and simulate individuals' exposures across the life course (i.e., exposome); and adopts lifecourse models, including the accumulation of risk model and critical/sensitive period models, to investigate the impact of individuals' exposures in the past on their health status at different stages of life. This paper introduces the theories, main analysis approaches and focus of spatial lifecourse epidemiology in the research of chronic non-communicable diseases for the purpose of better understanding and applications of spatial lifecourse epidemiology in the research of determinants of chronic non-communicable diseases, providing important reference for future research, facilitating the development of health geography to eventually achieve precise health management over the lifecourse.
		                        		
		                        		
		                        		
		                        			Artificial Intelligence
		                        			;
		                        		
		                        			Epidemiology
		                        			;
		                        		
		                        			Forecasting
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Health Status
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Noncommunicable Diseases/epidemiology*
		                        			
		                        		
		                        	
2.Origin traceability of main root of spring Panax notoginseng based on stable isotope fingerprint.
She-Wang LIANG ; Zhong-Jun HE ; Jun-Fen XIONG ; Chang-Qing HONG
China Journal of Chinese Materia Medica 2021;46(3):560-566
		                        		
		                        			
		                        			This paper established the identification technology of the main root origin of three-year-old spring Panax notoginseng aiming at providing theoretical basis for the protection and traceability of geographical indication products of P. notoginseng. Forty-four samples of three-year-old spring P. notoginseng from Guangxi Baise, Yunnan Wenshan, Yunnan new cultivating regions. The stable isotopic ratios of carbon, nitrogen, hydrogen and oxygen were determined by elemental analysis and stable isotope mass spectrometer. Combined with Duncan multiple comparative analysis, fisher discriminant analysis and sequential discriminant analysis, a origin discriminant model for the main root of three-year-old spring P. notoginseng was established for 3 production areas of P. notoginseng. The geographical climate and environment of three production areas of P. notoginseng are obviously different. From Guangxi Baise-Yunnan Wenshan-Yunnan new cultivating regions, the longitude, average annual temperature and annual precipitation gradually decrease, and the elevation and latitude are increasing. The results of multiple comparative analysis showed that there were significant or very signi-ficant differences in the δ~(13)C,δ~(15)N,δ~2H,δ~(18)O of the main roots of P. notoginseng in three regions. The results of fisher's discriminant analysis and sequential discriminant analysis showed that the correct discriminant rates of the main roots of P. notoginseng for three regions were 80.05%,76.47% and 90.91%, respectively, based on four stable isotope ratios, with an average of 84.09%. Using stable isotope fingerprint and chemometrics method, we can distinguish the origin of the main raw materials and products of P. notoginseng.
		                        		
		                        		
		                        		
		                        			China
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Isotopes
		                        			;
		                        		
		                        			Panax notoginseng
		                        			;
		                        		
		                        			Seasons
		                        			
		                        		
		                        	
3.Significance of map labelling method to research on evolution of historical production areas of Dao-di herbs.
Lu FU ; Hua-Sheng PENG ; Yuan YUAN ; Yan JIN ; Lu-Qi HUANG
China Journal of Chinese Materia Medica 2021;46(6):1574-1579
		                        		
		                        			
		                        			The research on the historical production areas of Dao-di herbs is of great value to the quality evaluation, production base and protection for geographic indications of Dao-di herbs. Current studies mostly focused on the sorting of written sources, but neglected the excavation of image records such as historical maps and topographic maps. This paper aims at exploreing the geographical scope and evolution mode of historical production area of the Dao-di herbs by combining the method of historical map labelling with the traditional literature and historical research methods. It can be divided into three steps: production area name extraction, historical map labelling and textual research on the historical production area of Dao-di herbs. This method may provide a better way to show the geographical scope and topographic features of the historical production areas of Dao-di herbs through historical maps labelling, which is essential to further explore the evolution of production areas of Dao-di herbs from ancient times to the present by comparing historical maps of different periods, and may be helpful to discover the reasons for the formation and evolution of historical producing areas of Dao-di herbs from different perspectives such as environment, climate, humanities, economy, policy, etc. In addition, the historical map database can be used for map labelling to help establish the relationship between the dynasties, historical names, and change cha-racteristics of the scope of the historical production areas of Dao-di herbs in the following research.
		                        		
		                        		
		                        		
		                        			Drugs, Chinese Herbal
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Medicine, Chinese Traditional
		                        			;
		                        		
		                        			Plants, Medicinal
		                        			;
		                        		
		                        			Research Design
		                        			
		                        		
		                        	
4.Genetic diversity and genetic structures of original plants of Viticis Fructus:an SSR markers-based analysis.
Yi-Qi SUN ; Lu-Ying ZHAO ; Bo ZHU ; Min JIA ; Qiao-Yan ZHANG ; Lu-Ping QIN
China Journal of Chinese Materia Medica 2021;46(15):3824-3831
		                        		
		                        			
		                        			The present study aimed to provide the protection strategies for wild germplasm resources of original plants of Viticis Fructus and a theoretical basis for the sustainable use of Viticis Fructus. The genetic diversity and genetic structures of the 232 indivi-duals in 19 populations of Vitex rotundifolia and V. trifolia were analyzed by eight SSR markers with tools such as Popgene32, GenAlex 6.502, and STRUCTURE. Bottleneck effect was detected for the population with more than 10 individuals. The results indicated that 42 and 26 alleles were detected from the populations of V. rotundifolia and V. trifolia, respectively, with average expected heterozygo-sities of 0.448 6 and 0.583 9, which are indicative of low genetic diversity. AMOVA revealed the obvious genetic variation of V. rotundifolia and V. trifolia within population(84.43%, P<0.01; 60.37%, P<0.01). Furthermore, in eight SSR loci, six from V. rotundifolia populations and two from V. trifolia populations failed to meet Hardy-Weinberg equilibrium expectations(P<0.05), which confirmed that the populations experienced bottleneck effect. As assessed by Mantel test, geographical distance posed slight impacts on the genetic variation between the populations of V. rotundifolia and V. trifolia. Principal component analysis(PCA) and STRUCTURE analysis demonstrated evident introgression of genes among various populations. The original plants of Viticis Fructus were confirmed low in genetic diversity and genetic differentiation level. Therefore, the protection of wild resources of original plants of Viticis Fructus should be strengthened to ensure its sustainable use.
		                        		
		                        		
		                        		
		                        			Alleles
		                        			;
		                        		
		                        			Fruit/genetics*
		                        			;
		                        		
		                        			Genetic Variation
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Microsatellite Repeats
		                        			;
		                        		
		                        			Vitex/genetics*
		                        			
		                        		
		                        	
5.Identification of geographical origins of Cordyceps based on data of amino acids with self-organizing map neural network.
Yan SHI ; Feng WEI ; Gang-Li WANG ; Shuang-Cheng MA ; Rui-Chao LIN
China Journal of Chinese Materia Medica 2021;46(18):4765-4773
		                        		
		                        			
		                        			In this study, data of amino acids of Cordyceps samples from Qinghai and Tibet was analyzed with self-organizing map neural network. A model of XY-Fused network was established with the content of 8 major amino acids and total amino acids for the identification of geographical origins of Cordyceps from Qinghai and Tibet. It had the prediction accuracy of 83.3% for the test set. In addition, data mining indicated that methionine was a special kind of amino acid in Cordyceps which could serve as a marker to identify its geographical origins. On this basis, the content ratio of methionine to total amino acids was proposed to be a quantifiable indicator to distinguish Cordyceps from Qinghai and Tibet.
		                        		
		                        		
		                        		
		                        			Amino Acids
		                        			;
		                        		
		                        			Cordyceps/genetics*
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Neural Networks, Computer
		                        			;
		                        		
		                        			Tibet
		                        			
		                        		
		                        	
6.Regional disparity of certified teaching hospitals on physicians' workload and wages, and popularity among medical students in Japan.
Yutaro IKKI ; Masaaki YAMADA ; Michikazu SEKINE
Environmental Health and Preventive Medicine 2021;26(1):75-75
		                        		
		                        			BACKGROUND:
		                        			Regional disparities in the working conditions of medical doctors have not been fully assessed in Japan. We aimed to clarify these differences in hospital characteristics: doctors' workload, wages, and popularity among medical students by city population sizes.
		                        		
		                        			METHODS:
		                        			We targeted 423 teaching hospitals certified by the Japanese Society of Internal Medicine and assessed the working conditions of physicians specializing in internal medicine. We calculated their workload (the annual number of discharged patients per physician) and retrieved data on junior residents' monthly wages from the Resinavi Book which is popular among medical students in Japan to know the teaching hospital's information and each hospital's website. Furthermore, we explored the interim matching rate of each hospital as its popularity among medical students. Next, we classified cities in which all hospitals were located into eight groups based on their population size and compared the characteristics of these hospitals using a one-way analysis of variance.
		                        		
		                        			RESULTS:
		                        			The average workload was 110.3, while the average workload in hospitals located in most populated cities (≥ 2,000,000) was 88.4 (p < 0.05). The average monthly wage was 351,199 Japanese yen, while that in most populated cities was 305,635.1 Japanese yen. The average popularity (matching rate) was 101.9%, and the rate in most populated areas was 142.7%, which was significantly higher than in other areas.
		                        		
		                        			CONCLUSIONS
		                        			Hospitals in most populated areas had significantly lower workloads and wages; however, they were more popular among medical students than those in other areas. This study was the first to quantify the regional disparities in physicians' working conditions in Japan, and such disparities need to be corrected.
		                        		
		                        		
		                        		
		                        			Cities/statistics & numerical data*
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Hospitals, Teaching/statistics & numerical data*
		                        			;
		                        		
		                        			Japan
		                        			;
		                        		
		                        			Physicians/statistics & numerical data*
		                        			;
		                        		
		                        			Population Density
		                        			;
		                        		
		                        			Salaries and Fringe Benefits/statistics & numerical data*
		                        			;
		                        		
		                        			Students, Medical/psychology*
		                        			;
		                        		
		                        			Workload/statistics & numerical data*
		                        			
		                        		
		                        	
7.Examining geographical disparities in the incubation period of the COVID-19 infected cases in Shenzhen and Hefei, China.
Zuopeng XIAO ; Wenbo GUO ; Zhiqiang LUO ; Jianxiang LIAO ; Feiqiu WEN ; Yaoyu LIN
Environmental Health and Preventive Medicine 2021;26(1):10-10
		                        		
		                        			BACKGROUND:
		                        			Current studies on the COVID-19 depicted a general incubation period distribution and did not examine whether the incubation period distribution varies across patients living in different geographical locations with varying environmental attributes. Profiling the incubation distributions geographically help to determine the appropriate quarantine duration for different regions.
		                        		
		                        			METHODS:
		                        			This retrospective study mainly applied big data analytics and methodology, using the publicly accessible clinical report for patients (n = 543) confirmed as infected in Shenzhen and Hefei, China. Based on 217 patients on whom the incubation period could be identified by the epidemiological method. Statistical and econometric methods were employed to investigate how the incubation distributions varied between infected cases reported in Shenzhen and Hefei.
		                        		
		                        			RESULTS:
		                        			The median incubation period of the COVID-19 for all the 217 infected patients was 8 days (95% CI 7 to 9), while median values were 9 days in Shenzhen and 4 days in Hefei. The incubation period probably has an inverse U-shaped association with the meteorological temperature. The warmer condition in the winter of Shenzhen, average environmental temperature between 10 °C to 15 °C, may decrease viral virulence and result in more extended incubation periods.
		                        		
		                        			CONCLUSION
		                        			Case studies of the COVID-19 outbreak in Shenzhen and Hefei indicated that the incubation period of COVID-19 had exhibited evident geographical disparities, although the pathological causality between meteorological conditions and incubation period deserves further investigation. Methodologies based on big data released by local public health authorities are applicable for identifying incubation period and relevant epidemiological research.
		                        		
		                        		
		                        		
		                        			Adolescent
		                        			;
		                        		
		                        			Adult
		                        			;
		                        		
		                        			Aged
		                        			;
		                        		
		                        			COVID-19/prevention & control*
		                        			;
		                        		
		                        			Child
		                        			;
		                        		
		                        			China/epidemiology*
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Infectious Disease Incubation Period
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Middle Aged
		                        			;
		                        		
		                        			Quarantine
		                        			;
		                        		
		                        			Retrospective Studies
		                        			;
		                        		
		                        			SARS-CoV-2
		                        			;
		                        		
		                        			Young Adult
		                        			
		                        		
		                        	
8.The use of geographical analysis in assessing the impact of patients' home addresses on their participation in outpatient cardiac rehabilitation: a prospective cohort study.
Atsuko NAKAYAMA ; Masatoshi NAGAYAMA ; Hiroyuki MORITA ; Takuya KAWAHARA ; Issei KOMURO ; Mitsuaki ISOBE
Environmental Health and Preventive Medicine 2020;25(1):76-76
		                        		
		                        			PURPOSE:
		                        			Geographical analysis is becoming a powerful tool for evaluating the quality of medical services and acquiring fundamental data for medical decision-making. Using geographical analysis, we evaluated the impact of the distance from patients' homes to the hospital on their participation in outpatient cardiac rehabilitation (OCR).
		                        		
		                        			METHODS:
		                        			All patients hospitalized for percutaneous coronary intervention, coronary artery bypass grafting, valvular surgery, congestive heart failure, and aortic diseases were advised to participate in an OCR program after discharge. Using the dataset of our cohort study of OCR from 2004 to 2015 (n = 9,019), we used geographical analysis to investigate the impact of the distance from patients' homes to hospital on their participation in our OCR program.
		                        		
		                        			RESULTS:
		                        			Patients whose road distance from home to hospital was 0-10 km, 10-20 km, and 20-30 km participated more in OCR than those whose road distance was ≧ 30 km (OR 4.34, 95% CI 3.80-4.96; OR 2.98, 95% CI 2.61-3.40; and OR 1.90, 95% CI 1.61-2.23, respectively). Especially in patients with heart failure, the longer the distance, the lesser the participation rate (P < .001).
		                        		
		                        			CONCLUSIONS:
		                        			Using geographical analysis, we successfully evaluated the factors influencing patients' participation in OCR. This illustrates the importance of using geographical analysis in future epidemiological and clinical studies.
		                        		
		                        			TRIAL REGISTRATION
		                        			UMIN000028435.
		                        		
		                        		
		                        		
		                        			Aged
		                        			;
		                        		
		                        			Aged, 80 and over
		                        			;
		                        		
		                        			Cardiac Rehabilitation/statistics & numerical data*
		                        			;
		                        		
		                        			Female
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Japan
		                        			;
		                        		
		                        			Male
		                        			;
		                        		
		                        			Middle Aged
		                        			;
		                        		
		                        			Outpatients/statistics & numerical data*
		                        			;
		                        		
		                        			Patient Participation/statistics & numerical data*
		                        			;
		                        		
		                        			Prospective Studies
		                        			;
		                        		
		                        			Spatial Analysis
		                        			
		                        		
		                        	
9.Microecology and geoherbalism of traditional Chinese medicine.
Dong-Mei HE ; Hai WANG ; Jin-Long CHEN ; Chang-Jiang-Sheng LAI ; Zhu-Yun YAN ; Lu-Qi HUANG
China Journal of Chinese Materia Medica 2020;45(2):290-302
		                        		
		                        			
		                        			Microecology was directly or indirectly involved in the growth and development, metabolism process, and component accumulation of traditional Chinese medicine(TCM) in various ways, which affected the formation and changes of the geoherbalism of TCM. It was one of the main tasks of traditional Chinese medical microecology(TCMM) to reveal the relationship among microecological structure and its change rule and the quality effect of TCM. The heterogeneity of soil environment caused by geographical and climatic factors, as well as the discreteness limitation caused by isolation factors such as distance and host selection, were the main causes of the differentiation of microecological geography of TCM. The microecology of TCM had important influences and contributions on the distinctive origin and quality of Dao-di herbs, which was mainly reflected in the formation of excellent germplasm(including disease and insect resistance, drought resistance, salt resistance, cold resistance, etc.), the increase of yield, the formation of medicinal parts, the metabolism and accumulation of effective components, the time limit of harvesting, and the toxicity, increasing efficiency or reducing toxicity of TCM in the processing, the changes of product efficiency after introduction, and the authenticity of fungus medicine. With the vigorous development of metabonomics and modern information technology, the following aspects would become the future research trends, including the microecologically mediated biogenic pathway of chemical components, the metabolic synthesis reactor of TCM based on the microecological quantitative effect relationship, the cultivation of genuine Chinese medicine based on reconstruction of microecological structure, the origin identification barcode traceability technology, and the toxicity reduction and efficiency enhancement technology of TCM based on the microecological.
		                        		
		                        		
		                        		
		                        			Climate
		                        			;
		                        		
		                        			Drugs, Chinese Herbal
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Medicine, Chinese Traditional
		                        			;
		                        		
		                        			Metabolomics
		                        			;
		                        		
		                        			Soil/chemistry*
		                        			
		                        		
		                        	
10.Sulzbacheromyces sinensis, an Unexpected Basidiolichen, was Newly Discovered from Korean Peninsula and Philippines, with a Phylogenetic Reconstruction of Genus Sulzbacheromyces
Dong LIU ; Xin YU WANG ; Li Song WANG ; Nitaro MAEKAWA ; Jae Seoun HUR
Mycobiology 2019;47(2):191-199
		                        		
		                        			
		                        			Most of lichens are formed by Ascomycota, less than 1% are lichenized Basidiomycota. The flora investigation of lichenized Ascomycota of South Korea has been well studied in the past three decades; however, prior to this study, none of basidiolichens was discovered. During the recent excursion, an unexpected clavarioid basidiolichen, Sulzbacheromyces sinensis was collected. Morphology and ecology has been recorded in detail. DNA was extracted, and ITS, 18S, 28S nuclear rDNA were generated. In order to further confirm the systematic position of the Korean specimens, maximum likelihood and Bayesian inference analysis including all the species of the order Lepidostromatales were conducted based on the ITS. As a result, the phylogenetic tree of the order Lepidostromatales was reconstructed, which differed from the previous studies. The inferred phylogenetic tree showed that species of Sulzbacheromyces in three different continents (Asia, South Africa and South America) were separated into three clades with support. In this study, the species worldwide distribution map of Lepidostromatales was illustrated, and S. sinensis had a widest distribution range (paleotropical extend to the Sino-Japanese) than other species (paleotropical or neotropical). Prior to this study, the range of distribution, southernmost and northernmost points and the fruiting time of S. sinensis were recorded, and the genus Sulzbacheromyces was firstly reported from Korean peninsula and Philippines.
		                        		
		                        		
		                        		
		                        			Ascomycota
		                        			;
		                        		
		                        			Asia
		                        			;
		                        		
		                        			Basidiomycota
		                        			;
		                        		
		                        			DNA
		                        			;
		                        		
		                        			DNA, Ribosomal
		                        			;
		                        		
		                        			Ecology
		                        			;
		                        		
		                        			Fruit
		                        			;
		                        		
		                        			Geography
		                        			;
		                        		
		                        			Korea
		                        			;
		                        		
		                        			Lichens
		                        			;
		                        		
		                        			Philippines
		                        			;
		                        		
		                        			Phylogeny
		                        			;
		                        		
		                        			South Africa
		                        			;
		                        		
		                        			Trees
		                        			
		                        		
		                        	
            
Result Analysis
Print
Save
E-mail