1.Untargeted metabolomics analysis-based metabolic characterization of hemangioma-derived endothelial cells
Kaiying YANG ; Bowen TIAN ; Chaoting LAN
Chinese Journal of Dermatology 2024;57(7):601-609
		                        		
		                        			
		                        			Objective:To investigate the metabolic profiles of hemangioma-derived endothelial cells (HemECs) based on untargeted metabolomics analysis.Methods:Primary human umbilical vein endothelial cells (HUVECs) served as the control group, and HemECs as the experimental group. Cellular metabolites were extracted and analyzed using ultra-performance liquid chromatography-mass spectrometry (UPLC-MS) for untargeted metabolomics analysis of HUVECs and HemECs. Bioinformatics analysis was employed to screen differentially expressed metabolites, followed by Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis and metabolic pathway analysis. Univariate analysis including t test and fold change analysis, as well as multivariate analysis including unsupervised principal component analysis (PCA) and orthogonal partial least squares discriminant analysis (OPLS-DA) were carried out. Results:A total of 542 and 241 differential metabolites were identified between HemECs and HUVECs by using the positive and negative ion modes of UPLC-MS, respectively. In the positive ion mode, the differential metabolites were mainly lipids and lipid-like molecules (35.142%) as well as organic acids and derivatives (24.537%), while in the negative ion mode the differential metabolites were organic acids and derivatives (31.466%) as well as lipids and lipid-like molecules (28.879%). Annotation analysis of differential metabolites indicated that differential metabolites were mainly clustered and enriched in amino acid metabolic pathways in both positive and negative ion modes. KEGG metabolic pathway analysis revealed that 3 significantly differential metabolic pathways were screened out in the positive ion mode ( P < 0.05), including "arginine and proline metabolism","glutamic acid and glutamine metabolism" and "sphingolipid metabolism"; in the negative ion mode, 12 significantly differential metabolic pathways were screened out ( P < 0.05), including "arginine and proline metabolism", "tricarboxylic acid cycle", "glycine, serine and threonine metabolism", etc. Conclusion:There were significant differences in metabolic profiles between HemECs and HUVECs, and amino acid metabolism, especially arginine and proline metabolism, was an important metabolic pathway involved in the regulation of HemEC metabolism.
		                        		
		                        		
		                        		
		                        	
2.Comparison of image quality based on deep-learning image reconstruction and iterative reconstruction algorithm for dual-energy CT: a phantom and animal-model study
Jiang JIANG ; Yong CHEN ; Xiaomeng SHI ; Wei LU ; Baisong WANG ; Bowen SHI ; Wenfang WANG ; Lan ZHU ; Zilai PAN ; Huan ZHANG
Chinese Journal of Radiology 2023;57(12):1361-1367
		                        		
		                        			
		                        			Objective:To investigate the impact of the deep learning reconstruction algorithm TrueFidelity TM for Gemstone Spectral Imaging (TF-GSI) and the adaptive statistical iterative reconstruction algorithm (ASiR-V, hereinafter referred to as ASiR-V) based on phantom and animal models on the image quality of dual-energy CT images. Methods:GE Revolution Apex CT was used to scan the ACR 464 phantom and a mouse model of gastric cancer with lymph node metastasis ( n=16). TF-GSI and ASiR-V were separately used to reconstruct middle and high-grade images (TF-GSI-M, TF-GSI-H, ASiR-V-50%, and ASiR-V-100%) on the phantom and mouse based on virtual monoenergetic images at 70 keV. The task transfer function (TTF) of bone and acrylic, image noise power spectrum (NPS), and detectability index (d′) of the phantom images were evaluated. One-way ANOVA analysis was used to compare the image noise, signal-to-noise ratio (SNR) and contrast-to-noise ratio (CNR) for brain and liver on images of mice. The consistency of the two reconstruction-algorithm images (TF-GSI-H and ASiR-V100%) in the detection of small lesions by two radiologists (A and B) was evaluated using kappa test. Results:In terms of the phantom, the TF-GSI-H group had the best performance in TTF, NPS, and d′. Compared to ASiR-V-100%, the TTF50% of bone and acrylic in the TF-GSI-H group increased by 2.4% and 8.9%, respectively; the NPS peak decreased by 54.1%, compared to ASiR-V-100%; the d′ of bone and acrylic in the TF-GSI-H group relative to ASiR-V-100% increased by 52.7% and 59.5%, respectively. The TF-GSI group had reduced image noise compared to the ASiR-V group, and both SNR and CNR of the two tissues increased, but the differences between the groups were not statistically significant (all P>0.05). The two reconstruction-algorithm images showed good consistency in image evaluation by the two radiologists (A, Kappa=0.875, P<0.001; B, Kappa=0.625, P=0.012). In terms of the detection of micro-metastases in mice, the TF-GSI group outperformed the ASiR-V group (average accuracy: 83.5% vs 71.9%; average sensitivity: 77.8% vs 61.2%; average specificity: 85.7% vs 85.7%). Conclusion:Compared with iterative reconstruction algorithm, the DLIR algorithm showed improved spatial resolution, reduced image noise, and enabled detectability of micro-lesion for images from dual-energy CT.
		                        		
		                        		
		                        		
		                        	
3.CD103 +CD8 +T cells combined with neutrophil-to-lymphocyte ratio predict response to neoadjuvant chemoimmunotherapy in advanced oral squamous cell carcinoma
Bowen LI ; Siqi REN ; Suling CHEN ; Tianjun LAN ; Fan WU ; Jinsong LI
Chinese Journal of Stomatology 2023;58(12):1257-1264
		                        		
		                        			
		                        			Objective:To investigate the relationship between the expression of CD103 +CD8 +T cells in locally advanced oral squamous cell carcinoma (LA-OSCC), and the response to neoadjuvant chemoimmunotherapy (NACI). Methods:Thirty LA-OSCC patients from the Department of Oral and Maxillofacial Surgery, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, who underwent NACI from June 2020 to December 2022 were analyzed, including 16 responders and 14 non-responders. Using multiple immunofluorescence technique to stain sections of patients to verify the correlation between the expression of CD103 +CD8 +T cells and the efficacy of NACI. CD103 +CD8 +T cell density was counted using Inform and HALO software. The Spearman correlation coefficient in rank correlation is used to describe the correlation between CD103 +CD8 +T cell and neutrophil-to-lymphocyte ratio (NLR), derived neutrophil-to-lymphocyte ratio (dNLR), platelet-lymphocyte ratio (PLR), systemic immune inflammation index (SII) It′s effectiveness as a predictive marker to NACI was analyzed by receiver operator characteristic (ROC) curve analysis and decision curve analysis (DCA). Two-tailed t-test or Mann-Whitney U-test was used to compare data between two groups, and one-way ANOVA was used to compare data between multiple groups. SPSS 22.0 and GraphPad prism 9.0 software were used for statistical analysis and plotting of relevant statistical graphs such as histograms. P<0.05 was considered a statistically significant difference. Results:The density of CD103 +CD8 +T cells has expanded in advanced OSCC patients who are responsive to NACI. The CD103 +CD8 +T cell densities in the responsive and nonresponsive groups were 118.30(41.92, 197.80) pcs/mm 2 and 21.63(4.91, 71.92) pcs/mm 2 respectively, with statistically significant differences( U=52.00, P=0.012). CD103 +CD8 +T cell abundance was negatively correlated with NLR, dNLR, PLR, and SII ( P<0.05). ROC curve analysis showed that the AUC for predicting efficacy of NLR, dNLR, PLR, and SII were 0.781 ( P=0.009, 95% CI: 0.5715-0.9910), 0.671 ( P=0.105, 95% CI: 0.467-0.881), 0.679 ( P=0.020 95% CI: 0.549-0.951), 0.750 ( P=0.096, 95% CI: 0.461-0.896), respectively. The AUC for CD103 +CD8 +T cells alone was 0.861 ( P=0.013, 95% CI: 0.585-0.950), and the AUC of combining CD103 +CD8 +T cells with NLR was 0.896 ( P=0.025, 95% CI: 0.454-0.938). Conclusions:The density of CD103 +CD8 +T cells is expanded in advanced OSCC patients who are responsive to NACI. CD103 +CD8 +T cells positively predict favorable responses as a strong indicator to NACI in advanced OSCC patients. Co-interpretation of CD103 +CD8 +T cells and NLR value enhances the predictive accuracy of NACI in advanced OSCC patients.
		                        		
		                        		
		                        		
		                        	
4.Research progress on molecular mechanism of transcription factor C/EBPβ in lung diseases
Haiyun WEN ; Yalan LUO ; Peng GE ; Bowen LAN ; Xuanchi DONG ; Guixin ZHANG ; Hailong CHEN
Chinese Critical Care Medicine 2022;34(8):875-880
		                        		
		                        			
		                        			CCAAT enhancer binding protein β (C/EBPβ), as a nuclear transcription factor necessary for the development of liver, airway epithelium, and adipose tissue, plays a vital role in physiological processes related to cell proliferation, apoptosis, and differentiation. However, the up-regulation of C/EBPβ activates signal pathways related to inflammatory response, epithelial-mesenchymal transition, cell proliferation and invasion, immune response, and angiogenesis by regulating a series of downstream genes transcription promotes the development of lung diseases. Therefore, targeting C/EBPβ may be a potential treatment strategy for lung diseases. This paper summarizes the regulatory effects of C/EBPβ and related signaling pathways in lung infection, asthma, chronic obstructive pulmonary disease, lung injury, pulmonary fibrosis, and lung cancer to provide a theoretical basis for the precision medicine of lung diseases.
		                        		
		                        		
		                        		
		                        	
5.The effect of bedside chest radiograph in the diagnosis and follow-up of severe and critical COVID-19
Huai CHEN ; Yujian ZOU ; Bowen LAN ; Zhengguang WU ; Zhiwen NI ; Suidan HUANG ; Xiaoqing LIU ; Yuquan SONG ; Qingsi ZENG
Chinese Journal of Radiology 2020;54(6):539-543
		                        		
		                        			
		                        			Objective:To explore the value of bedside chest radiograph in the diagnosis and follow-up of severe and critical COVID-19.Methods:Twenty-nine patients with severe or critical COVID-19 were collected from January 23 to February 23, 2020,from four COVID-19 designated hospitals in Guangdong Province. Bedside radiography was taken in all the 29 patients, ranged from 1 to 16 times for each patient. Twenty-seven patients underwent follow-up, and the number of re-examination ranged 1 to 15 times, and the interval of review is 1 to 8 days.The imaging findings of bedside chest radiography and the imaging changes on follow-up chest radiography were analyzed retrospectively.Results:Twenty-nine patients were collected. The radiography showed the lesions involved all more than 3 lung fields. The films showed consolidation shadow in 19 cases, multiple patches of shadow in 23 cases, reticular pattern in 12 cases, strips shadow in 14 cases, interlobar fissure thickening in 18 cases, and "white lung" in 4 cases.The complications included pleural effusion in 4 cases, pneumothorax in 2 cases, mediastinal and subcutaneous emphysema in 1 case. The radiography showed the lesions progressed in 15 cases, with expanded involvement of the lung.The increase of lesion density was found in 6 cases, new lesions were noted in 5 cases, while both of them were found in 4 cases. Nine cases showed improvement, with reduced range and decreased density. Patchy or consolidation shadow turned to strips shadow or articular pattern shadow in 8 cases.There was no significant change in 3 cases with large consolidation shadow.Conclusions:Bedside chest radiography has a good value in the follow-up of severely and critically ill patients with COVID-19, and can provide great help for clinicians to evaluate their condition.
		                        		
		                        		
		                        		
		                        	
6.To investigate the sensitivity of chemoradiotherapy on nasopharyngeal carcinoma using intravoxel incoherent motion MRI
Wenbo CHEN ; Guanhui CAI ; Bin ZHANG ; Bowen LAN ; Shuixing ZHANG
Chinese Journal of Radiology 2019;53(7):549-554
		                        		
		                        			
		                        			Objective To investigate the application value of intravoxel incoherent motion (IVIM) MRI for evaluating the sensitivity of chemoradiotherapy on nasopharyngeal carcinoma (NPC). Methods Sixty eight consecutive patients newly diagnosed with NPC in the stage of T3 (30 patients) or T4 (38 patients) were retrospectively enrolled. They were divided into effective group (45 patients) and poor?effective group (23 patients) clinically after a standard chemoradiotherapy according to the RECIST criteria. IVIM with 13 b?values (range,0 to 800 s/mm2) and general MRI were performed at 3.0 T MR scanner before and after chemoradiotherapy. Two radiologists major in MRI diagnose analyzed all images independently and placed regions of interest (ROIs). Intraclass correlation coefficient (ICC) was used to evaluate intra?observer and inter?observer agreement. And Mann?Whitney test was used to assess the differences between the two groups. Results The reproducibility between intra?observer and inter?observer was relatively good. Statistically,D [(0.69±0.06)×10?3 mm2/s vs. (0.52±0.10)×10?3 mm2/s; U=51.5,P<0.01)] and D* [(161.33 ± 11.50)×10-3 mm2/s vs. (126.96 ± 10.27)×10-3 mm2/s; U=18.0, P<0.01] were significantly higher in effective group than those in poor?effective group, whereas the difference of f (16.68 ± 1.94% vs. 16.40±1.11%, U=434.5, P=0.282) and ADC (1.23±0.11)×10?3 mm2/s vs. (1.25±0.10)×10?3 mm2/s,U=427.0,P=0.240) could not reach statistical significance between the 2 groups (P>0.05). Conclusions IVIM may be potentially useful in assessing the chemoradiotherapy on NPC. The higher D value combined with higher D*value might indicate the chemoradiotherapy on NPC is more sensitive,and the higher D*value might reflect increased blood vessel generation and parenchymal perfusion in NPC.
		                        		
		                        		
		                        		
		                        	
7.Research progress on chemical constituents and bioactivities of the plants of genus osmunda
Bowen LI ; Li CHEN ; Lan YANG ; Junxing DONG
International Journal of Traditional Chinese Medicine 2019;41(2):206-209
		                        		
		                        			
		                        			The plants of genus osmunda have abundant germplasm resource, which are widely distributed in the world. They have long been used for the treatment of viral, fugal and inflammation diseases. These plants have broad bioactivities and contain various chemical constituents such as flavonoids, esters and steroids. They also have high nutrition value, food value and ornamental value with composition of protein, lipids, carbohydrates, cellulose and trace elements (K, Ca, Mg, P, Fe, etc). The world wide research progresses of the genus osmunda on plant resources, chemical constituents, bioactivities in the past few decades were collected and summarized. This paper provided the evidences and references for further research and exploitment.
		                        		
		                        		
		                        		
		                        	
8.Development of transcriptional regulators of Streptococcus mutans in cariogenic virulence.
West China Journal of Stomatology 2016;34(6):643-646
		                        		
		                        			
		                        			Some transcriptional regulators contribute to the expression of Streptococcus mutans (S. mutans) cariogenic virulence factors. Although the target sequence transcriptional regulators anchored on the cell wall and the molecular mechanism of the regulation of S. mutans are yet to be clarified, certain global regulators potentially associated with the cariogenicity of S. mutans have been identified. This review is about these related transcriptional regulators, their function, and possible mechanisms.
		                        		
		                        		
		                        		
		                        			Gene Expression Regulation, Bacterial
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		                        			Myocarditis
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		                        			Streptococcal Infections
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		                        			Streptococcus mutans
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		                        			Transcription, Genetic
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		                        			Virulence
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		                        			Virulence Factors
		                        			
		                        		
		                        	
9.Metabolite profiles of mesenchymal stem cells underwent death on 9.4T MR spectroscopy
Haiyang DAI ; Yeyu XIAO ; Bikai HONG ; Yaowen CHEN ; Bowen LAN ; Renhua WU
Chinese Journal of Radiology 2014;48(12):1044-1048
		                        		
		                        			
		                        			Objective To explore the metabolite profiles of mesenchymal stem cells(MSCs)underwent death using 9.4 T high resolution MR spectroscopy.Methods MSCs were cultured and treated for 6,12 and 24 hours in a stimulated condition which included hypoxia,serum deprivation and changes of microenvironment.Cell death and the mortality was detected by light microscopy,Hocchst staining and flow cytometry analyses.The morality of stem cells was analyzed using one-way analysis of variance (ANOVA).Cell metabolite extraction was prepared by methanol-chloroform(M/C) method and analyzed on a 9.4 T MR device.1H-MR spectroscopy was obtained and the metabolite concentration of each time point was calculated and compared using one way ANOVA,the difference between two groups was analyzed by SNK test.Results Necrosis was the major form of cell death in the built model.The morality of every time sets was 16±4(0 h),658±61 (6 h),1 571 ± 154(12 h) and 2 816± 178(24 h) respectively,and the difference between each groups were statistically significant (F=298.96,P<0.01).After induced stem cells death for 6,12 and 24 h,the metabolite concentrations at 0.89 ppm was (1.48±0.69),(2.32±0.63)and (2.15±0.45)nmol/mg respectively,and increased compared to thc control[(1.41 ±0.25)nmol/mg]with statistical significance (F=329.57,P<0.01).The metabolite concentrations at 1.28 ppm was (6.42±0.31),(7.26±0.32)and (7.01 ±0.61)nmol/mg,respectively,and increased compared to the control[(5.76 ±0.74)nmol/mg]with statistical significance (F=19.56,P<0.01).The metabolite concentrations at 1.60 ppm was (2.36±0.31),(2.29±0.16)and (2.31 ± 0.24) nmol/mg respectively,and increased compared to the control[(1.96 ± 0.27)nmol/mg]with statistical significance (F=4.35,P<0.05).After induced stem cells death for 12 hours,the metabolite concentrations at 0.89 ppm was increased compared to 6 hours with statistical significance (P<0.05).The metabolite concentrations at 1.28 ppm was increased compared to 6 hours with statistical significance (P<0.05).After induced stem cells death for 24 hours,the metabolite concentrations at 0.89 ppm was decreased compared to 12 hours with statistical significance (P<0.05).Conclusions There are some specific characteristics on MRS of MSCs underwent death,and the fatty acid peak may serve as a biomarker for cell death.
		                        		
		                        		
		                        		
		                        	
10.Analyzing the relationship between eigenvalues and limb function of rabbit after traction inj ury
Jingcong CHEN ; Xinchun LI ; Qi WAN ; Bowen LAN ; Chongpeng SUN ; Jianxun HE ; Xiaomei WU ; Jiaxuan ZHOU
Journal of Practical Radiology 2014;(5):848-851,882
		                        		
		                        			
		                        			Objective To investigate the correlation between eigenvalues(λ∥ andλ⊥)of sciatic nerve and limb function in a rabbit model of acute nerve traction inj ury for finding the role ofλ∥ andλ⊥ on diagnosis of nerve inj uries.Methods The right sciatic nerves of 32 Newland rabbits were selected to be performed as traction injury,and then left sciatic nerves were treated as control for the sham operation side.MRI DTI scan was performed before and after the operation on 1 day ,3 day,and 1 week,2,3,4,6 and 8 weeks respectively.Theλ∥ andλ⊥ of inj ured sciatic nerves and sham operated nerves were measured,meanwhile functional exami-nations were evaluated,and then analyzing the correlation betweenλ⊥ of inj ured sciatic nerves and the score of inj ured limb function in the periods of 3 days to 8 weeks;finally different portions of sciatic nerve were removed for histological examinations.Results Theλ⊥ of inj ured sciatic nerves in the proximal portion was slightly increased at 3 days and recovered to the normal at 2 weeks.Theλ⊥ of inj ured sciatic nerves in the traction portion and distal portion were slightly raised at 1 day,reached to its maximum value at 3 days,and then decreased gradually after 1 week and dropped to the pre-operation level after 4 weeks.Theλ⊥ of inj ured sciatic nerves in the proximal portions was significantly higher than that of the sham-operated nerves from 1 day to 1 week(F=7.275,P=0.000). Theλ⊥ of inj ured sciatic nerves in the traction portion and distal portion were significantly higher than that of the sham-operated nerves from 1 day to 3 weeks(F=5.851,F=3.794,P=0.001,P=0.000).However,there was no significantly difference between theλ∥ of inj ured nerves in each portion and sham-operated nerves .The negative correlation between theλ⊥ of inj ured sciatic nerves in the distal portion and the score of the nerve function in the injured limb was found (r=-0.938,r=-0.897,P<0.01).Conclu-sion Theλ⊥ of inj ured nerves in the traction portion and distal portion could monitor the process of degeneration and regeneration of sciatic nerve in traction inj ury,while theλ∥ plays no obvious role in diagnosis of nerve inj uries.
		                        		
		                        		
		                        		
		                        	
            
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