1.GFAT1: A Potential Prognostic Biomarker in Colorectal Cancer
Habibah Faroque ; Abdullah Azmahani ; Muhammad Afiq Izzuddin Othman ; Nor Hidayah Abu Bakar ; Nadiah Wan-Arfah ; Siti Zarqah Omar ; Yasuhiro Nakamura ; Hironobu Sasano
Malaysian Journal of Medicine and Health Sciences 2023;19(No.3):13-19
Introduction: There is an increasing demand for additional techniques to diagnose and treat cancer including CRC
or colorectal cancer effectively. Utilizing antibodies as biomarker could contribute to accurate diagnosis of cancer
due to its high specificity and sensitivity. One of the etiologies of CRC progression was proposed as the alterations
of hexosamine biosynthetic pathway which could subsequently influence the rate-limiting enzyme, glutamine-fructose-6-phosphate aminotransferase (GFAT1). These increased enzymatic activities resulted in an elevation of glucose
uptake that provides nutrients facilitating the progression of cancer cells. Therefore, we attempted to determine the
potential of GFAT1 as the biomarker for CRC by correlating its expression with clinicopathological features of the patients. Methods: A total of 132 10% formalin-fixed paraffin embedded tissue were retrieved. Immunohistochemistry
(IHC) was performed on the tissue sections and digital images were subsequently acquired. All the images were automatedly analyzed using IHC Profiler. GFAT1 immunoreactivity in colorectal tissues was calculated using an adapted
H-score formula. Clinicopathological features of the patients were statistically correlated with the status of GFAT1.
Results: Colorectal adenocarcinoma tissues had the significantly highest GFAT1 H-scores with the mean of 103.18
compared to adenoma and non-tumor tissues. There have been no significant associations between clinicopathological characteristics of the patients and the status of GFAT1 except for tumor size. Conclusion: Immunoreactivity of
GFAT1 was significantly different between non-tumorous tissues and adenocarcinoma as well as between adenoma
and adenocarcinoma tissues. GFAT1 could serve as one of the prognostic biomarkers or useful targets.
2.Serum Procalcitonin (PCT) - Is there a Role as an Early Biomarker in Infected Diabetic Foot Ulcer (IDFU) Patients?
Omar J ; Ahmad NS ; Che-Soh NAA ; Wan-Azman WN ; Yaacob NM ; Abdul-Ghani NS ; Abdullah MR
Malaysian Orthopaedic Journal 2023;17(No.2):62-69
Introduction: Infected diabetic foot ulcers may lead to
serious complications if not recognised in the early stage.
Diagnosis of infection is particularly challenging at that
stage; thus, a sensitive inflammatory biomarker may be
helpful. We aimed to evaluate the role of procalcitonin (PCT)
as an early biomarker for infected diabetic foot ulcers
(IDFU).
Materials and method: This cross-sectional study was
conducted at Klinik Rawatan Keluarga (KRK), Orthopedic
clinic and wards in Hospital Universiti Sains Malaysia
(USM) from May 2020 to December 2020. A total of 264
participants were recruited and divided into three groups: 50
diabetic patients with no ulcers (control), 107 patients with
non-infected diabetic foot ulcers (NIDFU), and 107 patients
with infected diabetic foot ulcers (IDFU). The level of PCT
was taken for all patients. Total white count (TWC) and Creactive protein (CRP) were taken only for IDFU patients.
Diagnosis of infection was based on the Infectious Disease
Society of America-International Working Group of Diabetic
Foot (IDSA-IMWGDF), and the severity of infection was
graded according to the Wagner Classification.
Results: The level of PCT was higher in IDFU than in
NIDFU and diabetic patient, with a median (IQR) of 0.355
(0.63) ng/mL, 0.077 (0.15) ng/mL and 0.028 (0.02) ng/mL,
respectively. PCT and CRP showed moderate positive
correlations in IDFU patients (p<0.001). The sensitivity and
specificity were 63.6% and 83.2%, respectively, at the best
cut-off at 0.25 ng/mL.
Conclusion: PCT is a valuable biomarker for the diagnosis
of infection; however, it adds little value in the early
diagnosis of IDFU in view of its low sensitivity.
3.Effect of symbiotic bee fungus on survival of stingless bee Heterotrigona itama larvae
Nurul Izdihar Razali ; Nur Aliya Suhada Ahmad Nordin ; Nur Hannani Mohd Ridzuan ; Shamsul Bahri Abdul Razak ; Fatimah Hashim ; Mohd Nizam Lani ; Wan Bayani Wan Omar ; Ehsan Abdul Rahman ; Wahizatul Afzan Azmi
Malaysian Journal of Microbiology 2022;18(2):154-162
Aims:
Symbiotic bee fungus associated with the stingless bee larval food has been revealed to play a major role in performing a mutual relationship with the host. The fungus is believed capable to produce crucial nutrients that are required for larval pupation. However, detailed information on the fungus identification isolated from the larval food of our native Indo-Malaya stingless bee, Heterotrigona itama (Hymenoptera: Apidae), is poorly understood. Hence, this study was conducted to determine the effect of fungus isolated from the stingless bee larval food on the survival of H. itama larvae and identify the isolated fungus using both morphological and molecular analyses.
Methodology and results:
Elisa plates designed with F-bottom type were used as artificial brood cells in a controlled condition. The eggs transferred to Elisa plates were kept in the incubator with 75%-100% humidity and 25 ± 2.5 °C of temperature. This study carried out in three different treatments: (1) microbes-free larval food, (2) fresh larval food and (3) microbes-free larval food with fungus supplement. Results showed that the survival of H. itama larvae depends on the presence of beneficial fungus with the highest survival rate (Treatment 2 = 85.71%). The absence of the beneficial fungus in the fluid food of H. itama showed the lowest survival rate (Treatment 1 = 37.14%). Microscopy analysis showed that the fungus had various forms, including unconjugated asci, round-shaped ascospore and pseudohyphae. The molecular characterisation of the isolated fungi was performed using 23S rRNA gene sequencing using universal primers ITS1 and ITS4. DNA barcoding of three isolated fungi confirmed all isolated fungi matched Panus lecomtei (Basidiomycetes; Poriales; Polyporaceae) with 99.70% of similarity.
Conclusion, significance and impact of study
This study provides information on the importance of whitish fungus in appearance that existed in the brood cell, which is proposed to be the crucial component of in-vitro stingless bee queen rearing protocol.
Bees--microbiology
4.A conventional multiplex PCR for the detection of four common soil-transmitted nematodes in human feces: development and validation
Hassan, N.A. ; Noor Badi, F.A. ; Mohd-Shaharuddin, N. ; Wan Yusoff, W.S. ; Lim, Y.A.L. ; Chua, K.H. ; Sidi Omar, S.F.N. ; Chang, L.Y. ; Majid, H.A. ; Ngui, R.
Tropical Biomedicine 2022;39(No.1):135-142
Soil-transmitted helminth (STH) infections, mainly caused by Ascaris lumbricoides, Trichuris
trichiura, and hookworms, are among the most common intestinal parasites that infect
humans. The infections are widely distributed throughout tropical and subtropical countries,
including Malaysia, particularly in underprivileged communities. Microscopic and culture
techniques have been used as a gold standard for diagnostic techniques. However, these
methods yield low sensitivity and specificity, laborious and time-consuming. Therefore,
simple, rapid, and accurate alternative methods are needed for the simultaneous detection
of STH infections. Although advanced technologies such as real-time multiplex PCR have
been established, the use of this technique as a routine diagnostic is limited due to the
high cost of the instrument. Therefore, a single-round multiplex conventional PCR assay for
rapid detection of four STH species in the fecal sample was developed in this study. To
perform the single-round multiplex PCR, each pair of species-specific primers was selected
from target genes, including Ancylostoma duodenale (Internal Transcribed Spacer 2; accession
No. AJ001594; 156 base pair), Necator americanus (ITS 2; accession No. AJ001599; 225 base pair),
Ascaris lumbricoides (Internal Transcribed Spacer 1; accession No. AJ000895; 334 base pair)
and Trichuris triciura (partial ITS 1, 5.8s rRNA and partial ITS 2; accession No. AM992981; 518
base pair). The results showed that the newly designed primers could detect the DNA of STH
at low concentrations (0.001 ng/μl) with no cross-amplification with other species. This
assay enables the differentiation of single infections as well as mixed infections. It could
be used as an alternative and is a convenient method for the detection of STHs, especially
for the differentiation of N. americanus and A. duodenale.
5.The Frequency and Cost of Redundant Biochemistry Test in Tertiary Teaching Hospital
Siti Nadirah Ab Rahim ; Julia Omar ; Aniza Mohammed Jelani ; Najib Majdi Yaacob ; Wan Norlina Wan Azman
Malaysian Journal of Medicine and Health Sciences 2022;18(No.1):114-120
Introduction: Laboratory tests account for 66% of clinical decision making and reducing inappropriate test utilisation
is a step towards optimising patients’ care and hospital cost savings. This study aims to identify the rate and cost of
redundant test requests in our centre. Methods: A cross-sectional study comprising laboratory results of 14 analytes
in renal function test (RFT) and liver function test (LFT) were made. Data involved blood results from adult patients
admitted to Hospital Universiti Sains Malaysia from January to December 2018. The redundant test is defined as test
results consecutively normal twice and requested within 26 hours for analytes in RFT and 50 hours for analytes in
LFT. Cost contributions were estimated by multiplying cost-per-test with total redundant requests. The test redundancy in different wards and disease groups were also evaluated. Results: Equal distribution of RFT and LFT requests
were observed in both genders (50% respectively), with the most requests seen in the 60 – 79 years age group. More
than 20% redundancy rate was observed for seven analytes (ALT, total bilirubin, sodium, urea, potassium, AST,
Chloride), and overall redundancy was 19.7%, equals to Malaysian Ringgit (MYR) 669,105.00. Oncology wards
and genitourinary diseases contribute to the highest redundancy rate. Conclusion: This study estimated MYR 600
thousands of saving if test redundancy were to be eliminated. The finding is hoped to serve as a platform for future
intervention and policymaking. Future planning to optimise the current laboratory request system and collaboration
among physicians and laboratory professionals can minimise test inappropriateness.
6.Detection of Pathogenic Leptospira in Rats and Phylogenetic Analysis Using Outer Membrane Lipoprotein Lipl32 Gene at Two Major Public Markets
Steffi Julan Wan ; Nurshahira Sulaiman ; Nurul Farhana Zulkifli ; Vasantha Kumari Neela ; Hui Yee Chee ; Siti Norbaya Masri ; Nurul Huda Mohamad Ikbal ; Subha Bhassu ; Hasmahzaiti Omar ; Mazen M. Jamil Al-Obaidi ; Mohd Nasir Mohd Desa
Malaysian Journal of Medicine and Health Sciences 2022;18(No.2):1-5
Introduction: Limited studies have been documented on the presence of pathogenic Leptospira in public markets
serving the community in sub-districts of Selangor. The aim of this study was to detect the presence of pathogenic
Leptospira in rats using a gene encoding an outer membrane lipoprotein LipL32. Methods: Polymerase chain reaction (PCR) was performed using LipL32 primers on sixty kidney samples of rats trapped at two locations of study;
Pasar Borong Selangor in Seri Kembangan and Pasar Basah Bandar Baru Bangi in Bangi. Results: Out of 60 samples
analysed, 36.7% were positive for the presence of LipL32. All positive samples highly matched (>94%) nucleotide
sequence for LipL32 of pathogenic Leptospira and related to the pathogens through phylogenetic analysis. Conclusion: The detection of LipL32 indicates the potential presence of pathogenic Leptospira species at public markets.
Although only 60 rats were successfully trapped, the rats are mobile and might further transmit the pathogenic organisms to other areas.
7.Enteral myiasis causing acute dysentery: A case report
Amir, A. ; Lai, M.Y. ; Sarip, F. ; Omar, H. ; Wan Ismail, W.H. ; Grover, C.S. ; Lau, Y.L. ; Mahmud, R.
Tropical Biomedicine 2021;38(No.1):142-144
Enteral myiasis or intestinal myiasis is acquired by ingesting food or water contaminated
with dipteran fly eggs or larvae. Here, we describe a patient with intestinal myiasis presenting
with acute dysentery caused by the larva of Hermetia illucens. The larva was identified
morphologically, and its species confirmed through molecular analysis using polymerase
chain reaction and sequencing based on mitochondrial cytochrome c oxidase subunit I gene
(COI).
8.Effect of Single Dose Pre-induction Dexmedetomidine on Anaesthetic Requirement and Pain Profile in Orthopaedic Surgery: A Placebo-controlled Double Blind Randomised Controlled Trial
Samantha Rampal ; Nik Abdullah Nik Mohamad ; S Praveena Seevaunnamtum ; Mohd Zulfakar Mazlan ; Sanihah Che Omar ; Wan Mohd Nazaruddin Wan Hassan
Malaysian Journal of Medicine and Health Sciences 2021;17(No.4):157-161
Introduction: Dexmedetomidine, a selective α2
-adrenoreceptor agonist is an important adjuvant to general anaesthetic practice in view of its potent sedative, anaesthetic-sparing and analgesic effects. We investigated the effect
of a single dose pre – induction dexmedetomidine on the anaesthetic requirement during surgery and pain profile.
Methods: 60 patients who were ASA I - II and planned for orthopaedic procedures under general anaesthesia were
recruited. Patients were randomized into 2 groups: Group D received intravenous (IV) dexmedetomidine 1 µg/
kg (n=30) preoperatively or Group P received normal saline (n=30) instead. Both groups were induced with standardised IV induction agents and anaesthesia maintained with Sevoflurane, titrated using the bispectral index scale.
The expired fraction of sevoflurane and haemodynamic parameters were recorded at 5-minute intervals intraoperatively. Postoperatively, postoperative pain score (VAS) was documented at 30 minutes recovery. Results: Our study
showed a 27.8% reduction in the intraoperative expired fraction of sevoflurane requirement in group D versus 11.5%
reduction in Group P (p < 0.001) and a lower mean heart rate in Group D as compared to Group P [mean (CI): 69.20
(64.03, 74.37) versus 82.00 (72.12, 91.87) per minute, p = 0.00]. The mean (SD) VAS for 30 minutes postoperative
pain was significantly lower in group D when compared to group P [1.507(0.275) vs 2.209(0.403), p = 0.00]. Conclusion: This study has shown that a single dose of pre-induction dexmedetomidine was able to significantly reduce
anaesthetic requirement of sevoflurane and mean heart rate intraoperatively and postoperative pain.
9.Improvement of Trigeminal Neuralgia after Massage Therapy and Dry Needling
Wan Adnan Wan Omar ; Nur Liana Abu Bakar
Malaysian Journal of Medicine and Health Sciences 2020;16(Supp 2, May):81-83
Trigeminal neuralgia is a debilitating disease that can lead to depression and even suicide. Trigeminal neuralgia is usually treated using carbamazepine; however, many patients are refractory to such medical treatment. Thus, other treatment modalities are required, such as physical treatment and dry needling. The objective of this case report is to describe the management of trigeminal neuralgia in a 35 years old Malay housewife, who had left side atypical trigeminal neuralgia involving V2 region in the last four years, which was refractory to medical treatment. The application of Malay massage, combined with dry needling executed along the distribution of trigeminal nerve showed an improvement of pain on the Visual Analog Scale (VAS) from 7–8/10 to 0-1/10 after 11 sessions. Therefore, Malay massage combined with dry needling can be used as a non-pharmaceutical approach to managing trigeminal neuralgia.
10.Leucocytic DNA Methylation of Interleukin-6 Promoter Reduction in Pre-Hypertensive Young Adults
Wan Fatein Nabeila Wan Omar ; Aszrin Abdullah ; Norlelawati A Talib ; Azarisman Shah Mohd Shah ; Jamalludin AJamalludin Ab RahmanAb Rahman
Malaysian Journal of Medical Sciences 2019;26(6):46-54
Background: Pre-hypertension is associated with increased risk of cardiovascular disease.
Chronic inflammation plays an important role in the pathophysiology of essential hypertension,
with epigenetic dysregulation involvement. Nevertheless, the role of DNA methylation in prehypertensive
state is unknown. The aim of this study was to investigate the association between
DNA methylation level of interleukin-6 (IL-6) promoter in pre-hypertensive (PreHT) and
normotensive (NT) young adults.
Methods: A total of 80 NT and 80 PreHT healthy subjects aged between 18–45 years were
recruited in Kuantan, Pahang, Malaysia using an observational cross-sectional study approach.
DNA methylation level of IL-6 promoter in peripheral leukocytes were measured using bisulphite
conversion and MethyLight assay.
Results: There was no significant difference in age between NT and PreHT (P = 0.655).
The mean blood pressure was 110(8)/73(5) mmHg in NT and 125(7)/82(5) mmHg in PreHT
subjects. The IL-6 promoter methylation level was significantly lower in PreHT compared to NT
subjects (P < 0.001).
Conclusion: The current study demonstrates that hypomethylation of IL-6 promoter
was associated with pre-hypertension in young adults. Thus, IL-6 methylation could be used as
an early indicator for predicting hypertension and related risk of cardiovascular diseases in prehypertensive
subjects. Gene expression and longitudinal studies are warranted to examine the
methylation effect on IL-6 expression over time


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