1.Cytogenomic Profiling of Chronic Lymphocytic Leukaemia Patients Using DNA Microarray
Wan Norizzati Wan Mohamad Zamri ; Nazihah Mohd Yunus ; Ahmad Aizat Abdul Aziz ; Mohamad Ros Sidek ; Noratifah Mohd. Adam ; Sarina Sulong
Malaysian Journal of Medicine and Health Sciences 2023;19(No.3):160-170
		                        		
		                        			
		                        			Introduction: Chronic lymphocytic leukaemia (CLL) is the most frequent adult leukaemia in the Western world. The 
clinical presentation varies greatly, from very indolent cases to those with aggressive and fast advancing disease. 
This variation has significant implications for clinical approaches, therapeutic tactics, and, ultimately, survival durations from diagnosis. Acquired chromosomal aberrations play a key role in CLL aetiology. Due to difficulty to obtain 
abnormal metaphases for analysis, few methods such as fluorescence in-situ hybridization (FISH) and multiplex 
ligation-dependent probe assay (MLPA) were employed to detect chromosomal aberration however the methods are 
limited to specific locus only. Thus, this study is aimed to detect the chromosomal aberrations using DNA microarray platform. Methods: In this retrospective study, DNA archive obtained from 7 CLL patients which collected at 
diagnosis and subjected to Affymetrix CytoScan® 750K single nucleotide polymorphism (SNP) array following the 
manufacture procedure. The raw data obtained were analysed using the Chromosome Analysis Suite (ChAS) software (Affymetrix) using annotations of genome version GRCh38 (hg38). Result: Out of 7 patients, 4 of them showing 
deletion of 13q while 3 of them showing deletion of 14q in various region . Some of the deleted loci were too small 
(0.42-0.6Mb) to be detected by conventional cytogenetic analysis (CCA). There was also the presence of additional 
chromosomal aberrations that could be missed by CCA, FISH, or MLPA due to cryptic deletion or duplication that 
was as small as 0.4MB in size. Conclusion: The present study showed that low resolution chromosomal aberration 
was able to be detected using DNA microarray platform in comparison to CCA, FISH and MLPA. 
		                        		
		                        		
		                        		
		                        	
2.Head and Neck Cancer Survivors’ Perceptions of Cancer Treatment and Posttraumatic Growth
Nik Ruzyanei Nik Jaafar ; Norhaliza Abd Hamid ; Nur Amirah Hamdan ; Mohd Afifuddin Mohamad ; Rama Krsna Rajandram ; Raynuha Mahadevan ; Mohd Razif Mohamad Yunus ; Mohammad Farris Iman Leong Bin Abdullah
Malaysian Journal of Medicine and Health Sciences 2023;19(No.5):82-88
		                        		
		                        			
		                        			Introduction: Cancer patients’ perception on the treatment they received is vital to determine their adherence to 
cancer treatment, but important data on how this variable affects posttraumatic growth (PTG) experience by cancer 
patients is lacking. This cross-sectional study aimed to evaluate the degree of PTG among a cohort of head and neck 
cancer (HNC) survivors who were within first year of diagnosis and determined the association between perception 
of cancer treatment received (expectation and satisfaction with cancer treatment received and the feeling about the 
adverse effects) and PTG controlling for socio-demographic and clinical characteristics. Methods: HNC survivors 
were recruited from two oncology referral centres, and they were administered socio-demographic and clinical 
characteristics questionnaire, the Malay version of the Cancer Therapy Satisfaction Questionnaire (CTSQ) (to assess 
the satisfaction, expectation and feeling about the adverse effects of cancer treatment received) and the Malay version of the Posttraumatic Growth Inventory-Short Form (PTGi-SF) (to measure the degree of PTG). Results: A total 
of 200 HNC survivors participated in the study. The mean total PTGI-SF score was 39.5 (standard deviation [SD] 
= 9.3). Greater degree of positive expectation of cancer treatment and satisfaction with cancer treatment received 
significantly contributed to higher level of PTG, whereas feeling about side effects of treatment was not associated 
with PTG, after controlling for socio-demographic and clinical characteristics. Conclusion: Incorporating psychosocial interventions (such as education on cancer treatment and counselling) into the treatment regimen may facilitate 
development of PTG and hence, safeguard the mental well-being of HNC patients. 
		                        		
		                        		
		                        		
		                        	
3.Salvage Mandibulectomy in an Octogenarian with Recurrent Oral Cavity Squamous Cell Carcinoma: A Case Report
Mawaddah Azman ; Mohd Razif Mohamad Yunus ; Mohd Shawal Firdaus Mohamad
Archives of Orofacial Sciences 2023;18(no.1):43-49
		                        		
		                        			
		                        			Oral squamous cell carcinoma (OSCC) is the commonest malignant tumour affecting the oral cavity with 
a poor 5-year disease free survival. We present an octogenarian with a recurrent oral cavity squamous 
cell carcinoma, treated with salvage mandibulectomy without bony reconstruction. No immediate or 
intermediate perioperative complications were documented. Subsequent monthly surveillance clinical 
examination, endoscopy and computed tomography at six months post-operative showed no evidence 
of residual tumour. Geriatric syndrome, perioperative risk and oncologic stratification are three main 
cornerstones in evaluating feasibility of oncologic surgery in an elderly patient. A multidisciplinary 
approach allowed surgical extirpation of OSCC with a good outcome
		                        		
		                        		
		                        		
		                        	
4.Application of HRM Analysis in Detection of PDGFRA Exon 10 Polymorphism in CML Patients with Imatinib Resistance
Nur Sabrina Abd Rashid ; Sarina Sulong ; Azlan Husin ; Rosline Hassan ; Mohamad Ros Sidek ; Nazihah Mohd Yunus
Malaysian Journal of Medicine and Health Sciences 2022;18(No.5):130-137
		                        		
		                        			
		                        			Introduction: Imatinib mesylate has been widely used as a standard treatment for chronic myeloid leukemia (CML). 
It acts as a selective competitive inhibitor of the BCR-ABL tyrosine kinase. Despite the excellent efficacy on CML 
treatment, some patients developed resistance to the treatment. Mutation in the PDGFRA may be one of the factors 
involved in the mechanism of resistance that affects the response to imatinib. The mutational status of PDGFRA is 
highly relevant for prognosis and treatment prediction in CML patients. Thus, this study is intended to establish and 
validate a High Resolution Melting (HRM) analysis for PDGFRA exon 10 c.1432 T>C polymorphism in CML patients. 
Methods: High resolution melting (HRM) analysis was used to identify the c.1432 T > C polymorphism in PDGFRA
exon 10 (n =86; response = 43; resistance = 43). The results from HRM analysis were compared and validated with 
Sanger sequencing. The association between the polymorphism and treatment response was assessed by statistical 
analysis using binomial logistic regression analysis. Results: HRM analyses showed two different melt curves. One 
curve followed the shape of the reference, homozygous wild type (TT) and the other curve showed a different melting profile than the reference with the TC genotype (heterozygous variant). The results revealed that heterozygous 
variant (TC) genotype showed a high risk of acquiring resistance with an OR of 3.795; 95% CI: 1.502-9.591, with 
a statistically significant association, p = 0.005. HRM analysis also showed 100% sensitivity and specificity in the 
detection of PDGFRA exon 10. Conclusion: The HRM analysis of PDGFRA exon 10 c.1432 T>C was successfully 
established. The exon 10 c.1432 T>C polymorphism shows a higher risk for the development of resistance toward 
imatinib treatment. 
		                        		
		                        		
		                        		
		                        	
5.EPIDEMIOLOGY OF MORTALITY AMONG TUBERCULOSIS PATIENTS ON TREATMENT IN TERENGGANU STATE OF MALAYSIA
Hafizuddin Awang ; Soo Ning Goh ; Mohd Hanief Ahmad ; Kamarul Azhar Mohamed ; Muhammad Fahmi Mohd Zuber ; Kasemani Embong ; Nor Azimi Yunus
Journal of University of Malaya Medical Centre 2022;25(1):76-83
		                        		
		                        			Background:
		                        			Mortality among tuberculosis patients while on treatment is a public health concern in Malaysia. Exploring the risk factors for tuberculosis mortality is important to evaluate the effectiveness of national tuberculosis control programs and to identify vulnerable patients. This study aimed to estimate the 5-year proportion of mortality among tuberculosis patients on treatment and determine its associated factors in Malaysian setting.
		                        		
		                        			Methods:
		                        			A case-control study was conducted between deceased and survived groups in Terengganu state of Malaysia. All notified cases that fulfilled the inclusion and exclusion criteria from 1st January 2016 until 31st December 2020 were included in the study. Descriptive statistics, simple and multiple logistic regressions were employed for data analysis.
		                        		
		                        			Results:
		                        			There were 3,603 tuberculosis cases notified and 12.4% of total notified patients had died during their course of treatment. Multiple logistic regression revealed older age, working group, prison inmate, positive HIV status, far advanced lesion on chest radiographs and disseminated form of tuberculosis were the significant factors associated with mortality among tuberculosis patients with an adjusted odds ratio (AOR) 1.06 (95%CI: 1.04, 1.07; p<0.001); 0.48 (95%CI: 0.33, 0.68; p<0.001); 0.26 (95%CI: 0.09, 0.79; p=0.017); 12.18 (95%CI: 7.15, 20.75; p<0.001); 3.56 (95%CI: 1.46, 8.64; p=0.005); and 6.95 (95%CI: 2.02, 23.97; p=0.002), respectively.
		                        		
		                        			Conclusion
		                        			About 1 in 10 patients had died during the treatment of tuberculosis in Terengganu attributed to the pinpointed socio-demographic and clinical factors. The identified risk factors were useful in improving the current screening programme and clinical management to avert mortality among vulnerable patients.
		                        		
		                        		
		                        		
		                        			Tuberculosis
		                        			
		                        		
		                        	
6.Self-Care Skills between Institutionalised and Home Dwelling Older Adults: A Preliminary Study Kajian Rintis Kemahiran Penjagaan Diri Warga Tua di antara institusi dan rumah kediaman.
NOR AFIFI RAZAOB ; MASNE KADAR ; HANIF FARHAN MOHD RASHDI ; FARAHIYAH WAN YUNUS ; NOR AZWANI MOHAMED BUKHORI ; THAM SI YAN ; CHAI SIAW CHUI
Malaysian Journal of Health Sciences 2021;19(No.2):134-140
		                        		
		                        			
		                        			Self-care is defined as activities performed by individuals, families, and communities to enhance their health, prevent 
diseases, limit illnesses, and restore health. Previous research has mainly focused on self-care skills of older adults in 
either institution or residential homes separately but limited studies have compared between both these settings. This 
study aimed to compare the self-care skills between institutionalised and home dwelling older adults at selected area in 
Malaysia. A total of 43 participants aged 60 years old and above were recruited in our study; (23 participants were 
home-dwelled older adults and 19 participants were recruited from institutionalised older adults located in Kuala 
Lumpur). The Malay Version of Performance Assessment of Self-Care Skills (M-PASS-HOME) 4.0 was used focusing on 
four main subtests of self-skills; oral hygiene, trimming toenails, house mobility and shower mobility. The differences in 
self-care skills between institutionalised and home dwelling older adults are statistically significant (p<0.01) in the 
aspects of independency for all self-care activities. The results of this study revealed that home dwelling older adults 
group are more independent in self-care activities of oral hygiene, trimming toenails, house mobility and shower mobility 
compared to institutionalised group.
		                        		
		                        		
		                        		
		                        	
7.Correlation of E-Cadherin Expression with Clinicopathological Parameters and Its Outcomes among Prostate Cancer Patients in Hospital Kuala Lumpur
Siti Farah Sophia Mohd Nasir ; Ikmal Hisyam Bakrin ; Norhafizah Mohtarrudin ; Rosna Yunus
Malaysian Journal of Medicine and Health Sciences 2020;16(No.4):101-107
		                        		
		                        			
		                        			Introduction: Aberrant expression of E-cadherin has shown to have correlation with advanced disease of prostate 
cancer. In this study, we evaluated the potential of E-cadherin as a prostate cancer prognostic marker and determined 
its correlation with patient outcomes. Method: 46 prostate cancer specimens in the form of paraffin-embedded tissue 
blocks were retrieved from the Histopathology Unit, Department of Pathology, Hospital Kuala Lumpur. The expression patterns of E-cadherin were determined by immunohistochemistry staining. The E-cadherin expression was 
evaluated and scored as positive (3+) and negative or loss of expression (2+ and 1+). The correlations of E-cadherin 
expression with patient outcomes which included biochemical failure, disease-free, metastasis and local recurrence 
were determined. Correlations of E-cadherin expression with the currently used traditional clinicopathological parameters were also evaluated. Results: There were significant correlations between E-cadherin expression with biochemical failure (p=0.005) and local recurrence (p=0.003). However, there were no significant correlations between 
E-cadherin expression with disease-free (p=0.864) and tumour metastasis (p=0.430). Comparing the correlation of 
E-cadherin expression with the traditional clinicopathological parameters, there were significant correlations between E-cadherin expression with pathological staging (p=0.001), Gleason score (p=0.004) and perineural invasion 
(p=0.001). However, there was no significant correlation between E-cadherin expression with positive tumour margin (p=0.320). Conclusion: These results support the potential use of E-cadherin as a prognostic tool for prostate 
cancer as well as an additional marker along the currently available traditional clinicopathological parameters.
		                        		
		                        		
		                        		
		                        	
8.Patterns of Referral to Clinical Psychology Services in the Ministry of Health Malaysia
Manal Martadza ; Umi Izzatti Saedon ; Nooraini Darus ; Tunku Saraa-Zawyah Tunku Badli ; Siti Aisyah Ghazalan ; Wan Mohd Azam Wan Mohd Yunus
Malaysian Journal of Medical Sciences 2019;26(6):111-119
		                        		
		                        			
		                        			Background: This descriptive study identifies the demographic characteristics and
patterns of referral to clinical psychology services, which include types of diagnosis, types of
referral and source of referrals in child, adolescent, adult and geriatric cases in Malaysia.
Methods: We utilised 2,179 referrals between January and December 2015 from six
general hospitals and three mental health institutions that provide clinical psychology services.
Results: The percentage of male referrals (60.3%) is higher than that of female referrals
(39.7%). Adult cases had the highest percentage of referrals (48.2%). Children (48.8%) and
adolescent (28.1%) cases were mainly referred for psychological assessment. Meanwhile, adult
cases (74.8%) were mainly referred for psychological intervention. Neurodevelopmental disorders
was the diagnosis with the highest percentage of referrals recorded (41.4%), followed by depressive
disorders (13.3%) and anxiety disorders (12.7%), and the combination of other disorders.
Psychiatrists provided the highest number of referrals (82.2%), which is unsurprising as both
fields are closely related.
Conclusion: Clinical psychology services within the Ministry of Health (MOH) Malaysia
play an important role in mental health care.
		                        		
		                        		
		                        		
		                        	
9.Antifungal activity of selected plant extracts against Curvularia sp. infecting local purple sweet potato (Ipomoea batatas)
Mohd Nazri Baharon ; Nur Saliha Abdullah @Zulkifli ; Nur Adliza Baharom ; Sauli Mat Yunus
Malaysian Journal of Microbiology 2019;15(4):342-345
		                        		
		                        			Aims:
		                        			The present study was designed to evaluate in vitro antifungal activity of plant extracts against Curvularia sp., a causative agent of leaf blotch in local purple sweet potato crops. 
		                        		
		                        			Methodology and results:
		                        			The plants were selected on the basis of commonly used traditional remedies. Various dilutions, 1/2, 1/4, 1/6, 1/8 and 1/10 of black pepper, garden croton, garlic, tobacco and turmeric extracts were used for screening. The lesion characteristics on purple sweet potato leaves were collected from plots in MARDI Bachok. The “poisoning agar technique method” was used to get the antifungal activity. The results of antifungal activities were reported in terms of inhibition of mycelial growth of the test fungus. Out of five types of plant extracts used, only garlic and tobacco showed significantly high antifungal activity against the test pathogen based on poisoned food technique. Garlic extract showed complete inhibition (100%) at 1/2 dilution and more than 94% growth inhibition at concentrations as low as 1/10 dilution after seven days of incubation. However, black pepper and turmeric extracts showed moderate inhibition (20-70%) whereas, no inhibition was recorded in 1/8 and 1/10 dilution of garden croton extract. 
		                        		
		                        			Conclusion, significance and impact of study
		                        			Our findings suggested that garlic extract is the most potential antifungal agent against Curvularia sp. and can be used as bio-fungicide thus would reduce the dependency on synthetic fungicides by farmers. 
		                        		
		                        		
		                        		
		                        	
10.Effects of carbon source and additives on biomass, exopolysaccharide production and morphology of Pleurotus ostreatus in submerged cultivation
Nor Zalina Othman ; Abd. Rahman Jabir Mohd. Din ; Khairun Hani Natasya Zakaria ; Solleh Ramli ; Leong Hong Yeng ; Siti Norazlina Abd. Rashid ; Mohd. Mokhtar Mohd. Yunus ; Mohamad Roji Sarmidi
Malaysian Journal of Microbiology 2019;15(5):358-365
		                        		
		                        			Aims:
		                        			To investigate the influence of carbon sources and additives/surfactants on the mycelium growth and exopolysaccharides (EPS) production, including the morphology during submerged cultivation of Pleurotus ostreatus in the minimal-medium as the base medium. 
		                        		
		                        			Methodology and results:
		                        			Pleurotus ostreatus was cultivated in different types of carbon sources to investigate the effects of carbon sources to mycelium growth and changes of mycelium morphology which directly affects the synthesis of EPS. In addition, additives or surfactants can increase the bioavailability of less soluble substrates in the cultured medium for the mycelium growth and indirectly affects the EPS production. In this study, the cultivation of P. ostreatus in the minimal-medium by using glucose as the carbon source with the addition of lecithin at 1% (w/v) gave the highest EPS production 4.53 ± 0.30 g/L, an increase of about 89.53% when compared to the cultivation without the addition of lecithin. Addition of lecithin changes morphology of the pellets outer layer and under microscope showing a dense hyphal network surrounding the pellets with the sizes of micro pellets almost 0.5-1.5 mm which contributed to the increase of EPS production after 14 days cultivation at 26 °C 
		                        		
		                        			Conclusion, significance and impact of study
		                        			The choice of the carbon source should not only be for high productivity rate of mycelium growth and EPS production, but a cheaper alternative source should also be considered. In conclusion, high mycelium biomass and EPS production was achieved either by changes of the morphology through the type of carbon source and addition of additives such as lecithin. 
		                        		
		                        		
		                        		
		                        	
            

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