1.Family communication of genetic risk: What is it and why does it matter?.
Acta Medica Philippina 2025;59(8):7-15
Inherited conditions have implications not only for the individual affected but for the entire family. It is in this context that family communication of genetic risk information is important to understand. This paper aims to provide an overview of the construct of family communication of genetic risk and provide implications for healthcare providers. A search of relevant literature was done with electronic databases including PubMed, CINAHL, Embase, Scopus, and Web of Science. The findings from the literature were organized based on the Family Communication of Genetic Risk (FCGR) conceptual framework which highlights the attributes of the family communication of genetic risk process including influential factors, communication strategy, communication occurrence, and outcomes of communication. Healthcare providers need to understand how individuals share genetic risk with their family members so that appropriate support and interventions can be provided to them. This is especially important across countries, including the Philippines, as genetic services and testing move beyond the traditional medical genetics clinic to other medical specialties, a development where we would expect an increase in individuals and family members undergoing genetic evaluation and testing.
Communication ; Family ; Genetic Predisposition To Disease ; Genetic Testing
2.Family communication of genetic risk: What is it and why does it matter?
Acta Medica Philippina 2024;58(Early Access 2024):1-9
Inherited conditions have implications not only for the individual affected but for the entire family. It is in this context that family communication of genetic risk information is important to understand. This paper aims to provide an overview of the construct of family communication of genetic risk and provide implications for healthcare providers. A search of relevant literature was done with electronic databases including PubMed, CINAHL, Embase, Scopus, and Web of Science. The findings from the literature were organized based on the Family Communication of Genetic Risk (FCGR) conceptual framework which highlights the attributes of the family communication of genetic risk process including influential factors, communication strategy, communication occurrence, and outcomes of communication. Healthcare providers need to understand how individuals share genetic risk with their family members so that appropriate support and interventions can be provided to them. This is especially important across countries, including the Philippines, as genetic services and testing move beyond the traditional medical genetics clinic to other medical specialties, a development where we would expect an increase in individuals and family members undergoing genetic evaluation and testing.
communication
;
family
;
genetic predisposition to disease
;
genetic testing
3.Research progress on mosaic embryo transfer and pregnancy risk.
Chinese Journal of Preventive Medicine 2023;57(6):949-954
Mosaic embryos contain two or more genetically distinct cell lines, which can be detected by pre-implantation genetic testing for aneuploidy. At present, it has been reported that mosaic embryo transfer can lead to healthy live births. In order to prevent severe adverse pregnancy outcomes, such as implantation failure, abortion, congenital malformation and neonatal death after implantation of mosaic embryos, it is critical to carry out genetic counseling, prenatal diagnosis and pregnancy supervision for mosaic embryo transfer. This article reviews the selection of mosaic embryos, the pregnancy outcomes of mosaic embryo transfer, and the safety of offspring, in order to provide references for the clinical practice of mosaic embryo transfer.
Pregnancy
;
Female
;
Infant, Newborn
;
Humans
;
Preimplantation Diagnosis
;
Embryo Transfer
;
Pregnancy Outcome
;
Genetic Testing
;
Embryo Implantation/genetics*
4.Missed diagnosis or misdiagnosis: Common pitfalls in genetic testing.
Tarryn SHAW ; Rose FOK ; Eliza COURTNEY ; Shao-Tzu LI ; Jianbang CHIANG ; Joanne NGEOW
Singapore medical journal 2023;64(1):67-73
Genetic testing has the power to identify individuals with increased predisposition to disease, allowing individuals the opportunity to make informed management, treatment and reproductive decisions. As genomic medicine continues to be integrated into aspects of everyday patient care and the indications for genetic testing continue to expand, genetic services are increasingly being offered by non-genetic clinicians. The current complexities of genetic testing highlight the need to support and ensure non-genetic professionals are adequately equipped with the knowledge and skills to provide services. We describe a series of misdiagnosed/mismanaged cases, highlighting the common pitfalls in genetic testing to identify the knowledge gaps and where education and support is needed. We highlight that education focusing on differential diagnoses, test selection and result interpretation is needed. Collaboration and communication between genetic and non-genetic clinicians and integration of genetic counsellors into different medical settings are important. This will minimise the risks and maximise the benefits of genetic testing, ensuring adverse outcomes are mitigated.
Humans
;
Missed Diagnosis
;
Genetic Testing
;
Educational Status
;
Diagnosis, Differential
;
Genotype
5.Analysis of genotypes and phenotypes of three children with Cornelia de Lange syndrome.
Lei ZHAO ; Qinghua ZHANG ; Bingbo ZHOU ; Chuang ZHANG ; Lei ZHENG ; Yupei WANG ; Shengju HAO ; Ling HUI
Chinese Journal of Medical Genetics 2023;40(1):7-11
OBJECTIVE:
To analyze the clinical phenotype and results of genetic testing in three children with Cornelia de Lange syndrome (CdLS).
METHODS:
Clinical data of the children and their parents were collected. Peripheral blood samples of the pedigrees were collected for next generation sequencing analysis.
RESULTS:
The main clinical manifestations of the three children have included growth delay, mental retardation, peculiar facies and other accompanying symptoms. Based on the criteria proposed by the International Diagnostic Consensus, all three children were suspected for CdLS. As revealed by whole exome sequencing, child 1 has harbored NIPBL gene c.5567_5569delGAA insTAT missense variant, child 2 has harbored SMC1A gene c.607A>G missense variant, and child 3 has harbored HDAC8 gene c.628+1G>A splicing variant. All of the variants were de novo in origin.
CONCLUSION
All of the children were diagnosed with CdLS due to pathogenic variants of the associated genes, among which the variants of NIPBL and HDAC8 genes were unreported previously. Above finding has enriched the spectrum of pathogenic variants underlying CdLS.
Humans
;
Cell Cycle Proteins/genetics*
;
De Lange Syndrome/diagnosis*
;
Genotype
;
Phenotype
;
Genetic Testing
;
Histone Deacetylases/genetics*
;
Repressor Proteins/genetics*
6.Analysis of a child with autosomal dominant mental retardation type 40 due to variant of CHAMP1 gene.
Jinghan XU ; Jingjing LI ; Zhihui JIAO ; Gege SUN ; Duo CHEN ; Xiangdong KONG ; Li WANG
Chinese Journal of Medical Genetics 2023;40(1):47-52
OBJECTIVE:
To explore the clinical and genetic features of a child with autosomal dominant mental retardation type 40 (MRD40) due to variant of the CHAMP1 gene.
METHODS:
Clinical characteristics of the child were analyzed. Genetic testing was carried out by low-depth high-throughput and whole genome copy number variant sequencing (CNV-seq) and whole exome sequencing (WES). A literature review was also carried out for the clinical phenotype and genetic characteristics of patients with MRD40 due to CHAMP1 gene variants.
RESULTS:
The child, a 11-month-old girl, has presented with intellectual and motor developmental delay. CNV-seq revealed no definite pathogenic variants. WES has detected the presence of a heterozygous c.1908C>G (p.Y636*) variant in the CHAMP1 gene, which was carried by neither parent and predicted to be pathogenic. Literature review has identified 33 additional children from 12 previous reports. All children had presented with developmental delay and mental retardation, and most had dystonia (94.1%), delayed speech and/or walking (85.2%, 82.4%) and ocular abnormalities (79.4%). In total 26 variants of the CHAMP1 gene were detected, with all nonsense variants being of loss-of-function type, located in exon 3, and de novo in origin.
CONCLUSION
The heterozygous c.1908C>G (p.Y636*) variant of the CHAMP1 gene probably underlay the WRD40 in this child. Genetic testing should be considered for children featuring global developmental delay, mental retardation, hypertonia and facial dysmorphism.
Humans
;
Intellectual Disability/genetics*
;
Genetic Testing
;
Phenotype
;
Exome Sequencing
;
Heterozygote
;
Mutation
;
Chromosomal Proteins, Non-Histone/genetics*
;
Phosphoproteins/genetics*
7.Clinical and genetic analysis of a child with Schaaf-Yang syndrome.
Juan LUO ; Xiaohong CHEN ; Hui YAO ; Luhong YANG ; Tingting DU ; Yakun LI
Chinese Journal of Medical Genetics 2023;40(1):53-56
OBJECTIVE:
To explore the clinical characteristics and genetic etiology of a child with Schaaf-Yang syndrome (SYS).
METHODS:
Peripheral blood samples of the child and his parents were collected and subjected to whole exome sequencing. Sanger sequencing was used for family constellation verification, and bioinformatic analysis was performed for the candidate variant.
RESULTS:
The child, a 1-year-and-9-month-old boy, had clinical manifestations of retarded growth, small penis, and unusual facies. Genetic testing revealed that the child has harbored a novel heterozygous variant of c.3078dupG (p.Leu1027Valfs*28) of the MAGEL2 gene. Sanger sequencing showed that neither parent of the child carried the same variant. The c.3078dupG(p.Leu1027Valfs*28) variant of the MAGEL2 gene has not been included in the databases of ESP, 1000 Genomes and ExAC. According to the Standards and Guidelines for the Interpretation of Sequence Variants of the American College of Medical Genetics and Genomics (ACMG), the variant was judged to be pathogenic.
CONCLUSION
The c.3078dupG (p.Leu1027Valfs*28) variant of the MAGEL2 gene probably underlay the SYS in this child, which has further expanded the spectrum of the MAGEL2 gene variants.
Child
;
Humans
;
Infant
;
Male
;
Exome Sequencing
;
Genetic Testing
;
Heterozygote
;
Mutation
;
Proteins/genetics*
;
Developmental Disabilities/genetics*
8.Clinical and genetic analysis of an infant with permanent neonatal diabetes mellitus due to novel variant of insulin gene.
Mali LI ; Jia LI ; Shichao QIU ; Na SONG ; Zhihua WANG
Chinese Journal of Medical Genetics 2023;40(1):66-70
OBJECTIVE:
To explore the genetic basis for an infant with permanent neonatal diabetes mellitus (PNDM).
METHODS:
Clinical data of the child was collected. Targeted capture-next generation sequencing was carried out to identify the potential variants. Candidate variant was verified by Sanger sequencing of her family members.
RESULTS:
The child was a 4-month-and-26-day female featuring onset of ketoacidosis accompanied with fasting blood glucose of 24.4 mmol/L, positive urine glucose, decreased serum C-peptide, HbA1c of 9.58%, and negative diabetes autoantibody. Genetic testing revealed that she has carried a heterozygous c.314T>G (p.L105R) variant of the INS gene. Sanger sequencing verified that neither of her parents has carried the same variant, which was also unreported in the literature. The variant was classified as likely pathogenic based on the ACMG guidelines.
CONCLUSION
The c.314T>G (P.L105R) variant of the INS gene probably underlay the genetic etiology in this child. Genetic testing should be conducted for children with suspected PNDM for early diagnosis and appropriate treatment.
Humans
;
Infant
;
Child
;
Infant, Newborn
;
Female
;
Mutation
;
Insulin/genetics*
;
Diabetes Mellitus/genetics*
;
Genetic Testing
9.Genetic analysis of a child with Kartagener syndrome due to novel compound heterozygous variants of DNAH5 gene.
Shan ZHANG ; Chaobing WANG ; Yong ZHANG ; Yandong HU ; Xu LI ; Chuang ZHI
Chinese Journal of Medical Genetics 2023;40(1):71-75
OBJECTIVE:
To explore the clinical characteristics and genetic basis of a child with Kartagener syndrome (KTS).
METHODS:
Trio-whole exome sequencing was carried out for the child and his parents, and candidate variants were verified by Sanger sequencing. Changes in protein structure due to missense variants were simulated and analyzed, and the Human Splicing Finder 3.0 (HSF 3.0) online platform was used to predict the effect of the variant of the non-coding region.
RESULTS:
The child had featured bronchiectasis, sinusitis and visceral inversion. Genetic testing revealed that he has harbored compound heterozygous variants of the DNAH5 gene, namely c.5174T>C and c.7610-3T>G. Sanger sequencing confirmed the existence of the variants. The variants were not found in the dbSNP, 1000 Genomes, ExAC, ClinVar and HGMD databases. Protein structural analysis suggested that the c.5174T>C (p.Leu1725Pro) variant may affect the stability of local structure and its biological activity. The results of HSF 3.0 analysis suggested that the c.7610-3T>G variant has probably destroyed a splicing receptor to affect the transcription process.
CONCLUSION
The compound heterozygous variants of the DNAH5 gene probably underlay the pathogenesis in the child. Above finding may facilitate the understanding of the clinical characteristics and genetic basis of KTS, and further expand the spectrum of DNAH5 gene variants.
Male
;
Humans
;
Child
;
Mutation
;
Kartagener Syndrome/genetics*
;
Genetic Testing
;
Mutation, Missense
;
Exome Sequencing
;
Axonemal Dyneins/genetics*
10.Preimplantation genetic testing for monogenic/single gene disorders in a family with Molybdenum co-factor deficiency.
Zhan LI ; Hong ZHOU ; Jinhui SHU ; Caizhu WANG ; Peng HUANG
Chinese Journal of Medical Genetics 2023;40(2):143-147
OBJECTIVE:
To carry out preimplantation genetic testing for monogenic/single gene disorders (PGT-M) for a Chinese family affected with Molybdenum co-factor deficiency due to pathogenic variant of MOCS2 gene.
METHODS:
A family with molybdenum co-factor deficiency who attended to the Maternal and Child Health Care Hospital of Guangxi Zhuang Autonomous Region in April 2020 was selected as the research subject. Trophoblast cells were biopsied from blastocysts fertilized by intracytoplasmic sperm injection. Embryos carrying the MOCS2 gene variant and chromosome copy number variation (CNV) of more than 4 Mb were detected by single-cell whole genome amplification, high-throughput sequencing and single nucleotide polymorphism typing. Embryos without or carrying the heterozygous variant and without abnormal chromosome CNV were transplanted. During mid-pregnancy, amniotic fluid sample was collected for prenatal diagnosis to verify the results of PGT-M.
RESULTS:
Eleven oocytes were obtained, among which three blastocysts were formed through culturing. Results of genetic testing suggested that one embryo was heterozygous for the maternally derived MOCS2 gene variant and without chromosomal CNV. Following embryo transfer, intrauterine singleton pregnancy was attained. Prenatal diagnosis by amniocentesis at 18 weeks of gestation revealed that the MOCS2 gene variant and chromosomal analysis results were both consistent with that of PGT-M, and a healthy male infant was born at 37+5 weeks of gestation.
CONCLUSION
PGT-M has helped the couple carrying the MOCS2 gene variant to have a healthy offspring, and may become an important method for couples carrying other pathogenic genetic variants.
Female
;
Humans
;
Pregnancy
;
Aneuploidy
;
China
;
DNA Copy Number Variations
;
Genetic Testing/methods*
;
Preimplantation Diagnosis/methods*
;
Metal Metabolism, Inborn Errors/genetics*


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