1.Characterization of bacterial swarming motility: a review.
Chinese Journal of Biotechnology 2023;39(8):3188-3203
Swarming motility is a typical synergistic motion, in which bacteria use flagella and Type Ⅳ Pili together to move collectively on semi-solid surfaces. Swarming motility is a hot topic of research in the field of microbiology because of its close relationship with biofilm formation, fruiting bodies formation, pathogen invasion and microbial dispersal and symbiosis. A large number of studies have been conducted on bacterial swarming motility, including changes in the expression of key proteins, changes in chemical communications between bacteria as well as mechanical changes. The expression of flagellin and the level of intracellular c-di-GMP complicatedly regulates the collective behavior of bacteria in colonies, which consequently impacts the swarming motility. The unique physical properties of swarmer cells are conducive to the expansion of the whole colony. Factors such as nutrient and water content in the surrounding growth environment of bacteria also affect the ability of bacteria to swarm to different degrees. It is challenging to construct a universal model of swarming motility based on the molecular mechanisms of swarming in the future.
Bacteria
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Flagellin
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Symbiosis
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Water
2.Immunogenic molecules associated with gut bacterial cell walls: chemical structures, immune-modulating functions, and mechanisms.
Ruopeng YIN ; Tao WANG ; Huanqin DAI ; Junjie HAN ; Jingzu SUN ; Ningning LIU ; Wang DONG ; Jin ZHONG ; Hongwei LIU
Protein & Cell 2023;14(10):776-785
Interactions between gut microbiome and host immune system are fundamental to maintaining the intestinal mucosal barrier and homeostasis. At the host-gut microbiome interface, cell wall-derived molecules from gut commensal bacteria have been reported to play a pivotal role in training and remodeling host immune responses. In this article, we review gut bacterial cell wall-derived molecules with characterized chemical structures, including peptidoglycan and lipid-related molecules that impact host health and disease processes via regulating innate and adaptive immunity. Also, we aim to discuss the structures, immune responses, and underlying mechanisms of these immunogenic molecules. Based on current advances, we propose cell wall-derived components as important sources of medicinal agents for the treatment of infection and immune diseases.
Gastrointestinal Microbiome
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Intestinal Mucosa
;
Bacteria
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Immune System
;
Symbiosis
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Immunity, Mucosal
;
Immunity, Innate
3.Construction of protoplast genetic transformation system for Mycena--symbiont of Gastrodia elata.
Qing-Song YUAN ; Jiu-Chun AN ; Hui WANG ; Jiao XU ; Yan-Ping GAO ; Yang YANG ; Wei-Ke JANG ; Jin-Qiang ZHANG ; Liang-Yuan LI ; Tao ZHOU
China Journal of Chinese Materia Medica 2022;47(9):2304-2308
Mycena, a symbiont of Gastrodia elata, promotes seed germination of G. elata and plays a crucial role in the sexual reproduction of G. elata. However, the lack of genetic transformation system of Mycena blocks the research on the interaction mechanism of the two. In order to establish the protoplast transformation system of Mycena, this study analyzed the protoplast enzymatic hydrolysis system, screened the resistance markers and regeneration medium, and explored the transient transformation. After hydrolysis of Mycena hyphae with complexes enzymes for 8 h and centrifugation at 4 000 r·min~(-1), high-concentration and quality protoplast was obtained. The optimum regeneration medium for Mycena was RMV, and the optimum resistance marker was 50 mg·mL~(-1) hygromycin. The pLH-HygB-HuSHXG-GFP-HdSHXG was transformed into the protoplast of Mycena which then expressed GFP. The established protoplast transformation system of Mycena laid a foundation for analyzing the functional genes of Mycena and the molecular mechanism of the symbiosis of Mycena and G. elata.
Agaricales
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Gastrodia/genetics*
;
Protoplasts
;
Symbiosis/genetics*
;
Transformation, Genetic
4.Effect of different fungicides on efficiency of mycorrhizal symbiosis on Salvia miltiorrhiza.
Chun-Juan PU ; Peng-Ying LI ; Yu-Zhi LUO ; Xiu-Teng ZHOU ; Ai-Juan SHAO ; Mei-Lan CHEN
China Journal of Chinese Materia Medica 2021;46(6):1368-1373
Arbuscular mycorrhizal fungi provided is beneficial to Salvia miltiorrhiza for increasing yield, promoting the accumulation of active ingredients, and alleviating S. miltiorrhiza disease etc. However, the application of fungicides will affect the benefit of arbuscular mycorrhizal fungi and there is little research about it. This article study the effect of four different fungicides: carbendazim, polyoxin, methyl mopazine, and mancozeb on mycorrhiza benefit to S. miltiorrhiza by the infection intensity of arbuscular mycorrhizal fungi, the growth of S. miltiorrhiza, and the content of active ingredients. RESULTS:: showed that different fungicides had different effects. The application of mancozeb had the strongest inhibitory effect on the mycorrhizal benefit to S. miltiorrhiza. Mancozeb significantly reduced the mycorrhizal colonization and the beneficial effect of arbuscular mycorrhizal fungi on the growth and the accumulation of active components of S. miltiorrhiza. The application of polyoxin had no significant effect on mycorrhizal colonization. Instead, it had a synergistic effect with the mycorrhizal benefit to promoting the growth and accumulation of rosmarinic acid of S. miltiorrhiza. The inhibitory strengths of four fungicides are: mancozeb>thiophanate methyl, carbendazim>polyoxin. Therefore, we recommend applying biological fungicides polyoxin and avoid applying chemical fungicides mancozeb for disease control during mycorrhizal cultivation of S. miltiorrhiza.
Fungicides, Industrial/pharmacology*
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Mycorrhizae
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Plant Roots
;
Salvia miltiorrhiza
;
Symbiosis
5.Symbiosis between hyperaccumulators and arbuscular mycorrhizal fungi and their synergistic effect on the absorption and accumulation of heavy metals: a review.
Li WANG ; Gen WANG ; Fang MA ; Yongqiang YOU
Chinese Journal of Biotechnology 2021;37(10):3604-3621
The remediation of heavy-metal (HM) contaminated soil using hyperaccumulators is one of the important solutions to address the inorganic contamination widely occurred worldwide. Hyperaccumulators are able to hyperaccumulate HMs, but their planting, growth, and extraction capacities are greatly affected by HM stress. The application of arbuscular mycorrhizal fungi (AMF) enhances the function of hyperaccumulators by combining the functional advantages of both, improving the efficiency of remediation, shortening the remediation cycle, and maintaining the stability and persistence of the remediation. Thus, the combined use of AMF with hyperaccumulators has broad prospects for application in the management of increasingly complex and severe HM pollution. This review starts by defining the concept of hyperaccumulators, followed by describing the typical hyperaccumulators that were firstly reported in China as well as those known to form symbioses with AMF. This review provides a systematic and in-depth discussion of the effects of AMF on the growth of hyperaccumulators, as well as the absorption and accumulation of HMs, the effects and mechanism on the hyperaccumulator plus AMF symbiosis to absorb and accumulate HMs. AMF enhances the function of hyperaccumulators on the absorption and accumulation of HMs by regulating the physicochemical and biological conditions in the plant rhizosphere, the situation of elements homeostasis, the physiological metabolism and gene expression. Moreover, the symbiotic systems established by hyperaccumulators plus AMF have the potential to combine their abilities to remediate HMs-contaminated habitat. Finally, challenges for the combined use of remediation technologies for hyperaccumulator plus AMF symbiosis and future directions were prospected.
Biodegradation, Environmental
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Metals, Heavy
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Mycorrhizae/chemistry*
;
Plant Roots/chemistry*
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Soil Pollutants
;
Symbiosis
6.The health benefits of the active ingredients and whole food components of natural plants through regulating the flora.
Chinese Journal of Biotechnology 2021;37(11):3853-3862
With the cooperation of bacteria and the human body, the nutrients in food are deeply digested, utilized, and shared. In addition, symbiosis is formed between microorganisms and hosts. Such a delicate combination makes the microorganisms form the inherent flora in the human body. They obtain the biological basis for survival, and provide the necessary regulation and support for the host in terms of immunity and nutrition, through their functional metabolism and population signals. At present, most of the researches focus on the isolation and evaluation of the functional components of plants, such as plant polysaccharides, polyphenols, flavonoids, and other active functional components. However, in traditional Chinese medicine, plants are often used with whole food components. To date, studies have found that the dynamics of flora affecting human health are not fixed, nor dependent on the change of a single strain. The ecological competition and metabolic regulation between microorganisms are usually coevolved with the host. The regulatory effect of natural plants for both medicine and food mainly depends on their whole food components. This provides evidence to support the role of whole food components played in promoting the efficacy of traditional Chinese medicine from the perspective of microenvironment. Therefore, the development and utilization of medicinal and edible natural plant activities should be fully understood and evaluated with flora regulation.
Bacteria
;
Gastrointestinal Microbiome
;
Humans
;
Medicine, Chinese Traditional
;
Polysaccharides
;
Symbiosis
7.Technical evaluation and principle analysis of simulative habitat cultivation of Dendrobium nobile.
Jin-Qiang ZHANG ; Tao ZHOU ; Cheng-Hong XIAO ; Wei-Ke JIANG ; Lan-Ping GUO ; Chuan-Zhi KANG ; Xiao-Kang LIAO ; Yuan-Ping HUANG ; Xiao WANG ; Heng LU
China Journal of Chinese Materia Medica 2020;45(9):2042-2045
The technique of "simulative habitat cultivation" is to preserve the quality of traditional Chinese medicine by simulating the original habitat and site environment of wild Chinese medicine resources. Dendrobium nobile is the most representative variety of traditional Chinese medicine which reflects the coordinated development of medicinal material production and ecological environment. In this paper, the main technical points of the simulated cultivation model of D. nobile were summarized as follows: rapid propagation of seedling tissue technology to ensure the genetic stability of provenance; line card+fermented cow manure+live moss method to improve the survival rate; epiphytic stone cultivation to improve the quality of medicinal materials; and the integration of mycorrhizal fungi to improve the quality stability of medicinal materials. On the basis of summarizing the ecological benefits, economical and social benefits generated by the application of the technology, the paper systematically analyzes the principle of the technology for the cultivation of D. nobile to promote the excellent quality, the light, gas, heat and fertilizer resources of the undergrowth niche are in line with the wild site environment of D. nobile. The rich and complex soil microbial community in the forest laid the foundation for the species diversity needed for the growth of D. nobile.The stress effect on the growth of D. nobile resulted in the accumulation of secondary metabolites. The symbiotic relationship between the symbiotic fungi such as bryophytes and D. nobile promotes the synthesis of plant secondary metabolites. The high quality D. nobile was produced efficiently by improving and optimizing the cultivation techniques.
Animals
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Cattle
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Dendrobium
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Ecosystem
;
Female
;
Medicine, Chinese Traditional
;
Mycorrhizae
;
Symbiosis
8.Co-expression of lignocellulase from termite and their endosymbionts.
Jiao DU ; Shuzhe JIANG ; Jianhua WEI ; Yulong SHEN ; Jinfeng NI
Chinese Journal of Biotechnology 2019;35(2):244-253
Natural lignocellulosic materials contain cellulose, hemicellulose, and lignin. Cellulose hydrolysis to glucose requires a series of lignocellulases. Recently, the research on the synergistic effect of lignocellulases has become a new research focus. Here, four lignocellulase genes encoding β-glucosidase, endo-1,4-β-glucanase, xylanase and laccase from termite and their endosymbionts were cloned into pETDuet-1 and pRSFDuet-1 and expressed in Escherichia coli. After SDS-PAGE analysis, the corresponding protein bands consistent with the theoretical values were observed and all the proteins showed enzyme activities. We used phosphoric acid swollen cellulose (PASC) as substrate to measure the synergistic effect of crude extracts of co-expressing enzymes and the mixture of single enzyme. The co-expressed enzymes increased the degradation efficiency of PASC by 44% compared with the single enzyme mixture; while the degradation rate increased by 34% and 20%, respectively when using filter paper and corn cob pretreated with phosphoric acid as substrates. The degradation efficiency of the co-expressed enzymes was higher than the total efficiency of the single enzyme mixture.
Animals
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Cellulase
;
Cellulose
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Hydrolysis
;
Isoptera
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Lignin
;
Symbiosis
;
beta-Glucosidase
9.Microbes and host dance in harmony or disarray?
Protein & Cell 2018;9(5):395-396
10.Cancer Energy Metabolism: Shutting Power off Cancer Factory
Biomolecules & Therapeutics 2018;26(1):39-44
In 1923, Dr. Warburg had observed that tumors acidified the Ringer solution when 13 mM glucose was added, which was identified as being due to lactate. When glucose is the only source of nutrient, it can serve for both biosynthesis and energy production. However, a series of studies revealed that the cancer cell consumes glucose for biosynthesis through fermentation, not for energy supply, under physiological conditions. Recently, a new observation was made that there is a metabolic symbiosis in which glycolytic and oxidative tumor cells mutually regulate their energy metabolism. Hypoxic cancer cells use glucose for glycolytic metabolism and release lactate which is used by oxygenated cancer cells. This study challenged the Warburg effect, because Warburg claimed that fermentation by irreversible damaging of mitochondria is a fundamental cause of cancer. However, recent studies revealed that mitochondria in cancer cell show active function of oxidative phosphorylation although TCA cycle is stalled. It was also shown that blocking cytosolic NADH production by aldehyde dehydrogenase inhibition, combined with oxidative phosphorylation inhibition, resulted in up to 80% decrease of ATP production, which resulted in a significant regression of tumor growth in the NSCLC model. This suggests a new theory that NADH production in the cytosol plays a key role of ATP production through the mitochondrial electron transport chain in cancer cells, while NADH production is mostly occupied inside mitochondria in normal cells.
Adenosine Triphosphate
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Aldehyde Dehydrogenase
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Cytosol
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Electron Transport
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Energy Metabolism
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Fermentation
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Glucose
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Lactic Acid
;
Metabolism
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Mitochondria
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NAD
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Oxidative Phosphorylation
;
Oxygen
;
Symbiosis

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