1.Development of a fluorescence resonance energy transfer (FRET) immunoassay for the measurement of serum insulin.
Jie NAN ; Huan XIA ; Nan ZHANG ; Hongwei ZHAO ; Bei XU ; Na SAI
Chinese Journal of Cellular and Molecular Immunology 2023;39(10):898-903
		                        		
		                        			
		                        			Objective To investigate the fluorescence resonance energy transfer (FRET) effect between dylight (DL) and AuNP (AuNP), and to construct a new fluorescence immunoassay for insulin in combination with the immunocompetition method. Methods Insulin antigen (Ag) and insulin antibody (Ab) were conjugated with DL and AuNP respectively to form DL-Ag conjugate and AUNp-AB conjugate. A novel fluorescence immunoassay for insulin was developed on the basis of FRET effect and the immune competition response between them. Then the performance of the method was evaluated and its application in actual samples was explored. Results The fluorescence immunoassay showed high sensitivity (0.015 ng/mL), short measurement time (4 min) and good specificity. It was successfully used in the measurement of serum insulin, and the recovery was between 96.9% and 121.1%. Conclusion FRET effect between AuNP and DL can be applied to develop a fluorescence immunoassay for the measurement of serum insulin.
		                        		
		                        		
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			Insulin
		                        			;
		                        		
		                        			Immunoassay
		                        			
		                        		
		                        	
2.Research progress on the fluorescence resonance energy transfer-based polymer micelles as drug carriers.
Linrui JIANG ; Ni ZENG ; Qingshan MIAO ; Changqiang WU ; Shaoyun SHAN ; Hongying SU
Journal of Biomedical Engineering 2022;39(5):1022-1032
		                        		
		                        			
		                        			Polymer micelles formed by self-assembly of amphiphilic polymers are widely used in drug delivery, gene delivery and biosensors, due to their special hydrophobic core/hydrophilic shell structure and nanoscale. However, the structural stability of polymer micelles can be affected strongly by environmental factors, such as temperature, pH, shear force in the blood and interaction with non-target cells, leading to degradations and drug leakage as drug carriers. Therefore, researches on the structural integrity and in vivo distribution of micelle-based carriers are very important for evaluating their therapeutic effect and clinical feasibility. At present, fluorescence resonance energy transfer (FRET) technology has been widely used in real-time monitoring of aggregation, dissociation and distribution of polymer micelles ( in vitro and in vivo). In this review, the polymer micelles, characteristics of FRET technology, structure and properties of the FRET-polymer micelles are briefly introduced. Then, methods and mechanism for combinations of several commonly used fluorescent probes into polymer micelles structures, and progresses on the stability and distribution studies of FRET-polymer micelles ( in vitro and in vivo) as drug carriers are reviewed, and current challenges of FRET technology and future directions are discussed.
		                        		
		                        		
		                        		
		                        			Micelles
		                        			;
		                        		
		                        			Drug Carriers/chemistry*
		                        			;
		                        		
		                        			Polymers/chemistry*
		                        			;
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			Polyethylene Glycols/chemistry*
		                        			
		                        		
		                        	
3.Advances in the research and applications of orange fluorescent protein.
Wen PENG ; Peimin HE ; Dingji SHI ; Rui JIA
Chinese Journal of Biotechnology 2020;36(6):1060-1068
		                        		
		                        			
		                        			Fluorescent proteins can be used as probes to investigate intercellular molecular interactions and trace the pathway of specific metabolites, thus providing a detailed and accurate description of various metabolic processes and cellular pathways in living cells. Nowadays, the existing fluorescent proteins cover almost all spectral bands from ultraviolet to far-red. These fluorescent proteins have been applied in many fields of bioscience with the help of high-resolution microscopy, making great contributions to the development of biology. It is generally agreed that orange fluorescent proteins refer to the fluorescent proteins at the spectral range of 540-570 nm. In recent years, researches on orange fluorescent proteins have made great progress, and they have been widely applied in the field of biology and medicine as reporter protein and fluorescence resonance energy transfer as fluorescent receptor. This paper reviews the studies in the field of orange fluorescent proteins over the last 15 years, with the special focus on the development and application of orange fluorescent proteins to provide the basis for the future studies.
		                        		
		                        		
		                        		
		                        			Biosensing Techniques
		                        			;
		                        		
		                        			trends
		                        			;
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			Luminescent Proteins
		                        			;
		                        		
		                        			metabolism
		                        			;
		                        		
		                        			Research
		                        			;
		                        		
		                        			trends
		                        			
		                        		
		                        	
4.On the necessity of an integrative approach to understand protein structural dynamics.
Journal of Zhejiang University. Science. B 2019;20(6):496-502
		                        		
		                        			
		                        			Proteins are dynamic, fluctuating between multiple conformational states. Protein dynamics, spanning orders of magnitude in time and space, allow proteins to perform specific functions. Moreover, under certain conditions, proteins can morph into a different set of conformations. Thus, a complete understanding of protein structural dynamics can provide mechanistic insights into protein function. Here, we review the latest developments in methods used to determine protein ensemble structures and to characterize protein dynamics. Techniques including X-ray crystallography, cryogenic electron microscopy, and small angle scattering can provide structural information on specific conformational states or on the averaged shape of the protein, whereas techniques including nuclear magnetic resonance, fluorescence resonance energy transfer (FRET), and chemical cross-linking coupled with mass spectrometry provide information on the fluctuation of the distances between protein domains, residues, and atoms for the multiple conformational states of the protein. In particular, FRET measurements at the single-molecule level allow rapid resolution of protein conformational states, where information is otherwise obscured in bulk measurements. Taken together, the different techniques complement each other and their integrated use can offer a clear picture of protein structure and dynamics.
		                        		
		                        		
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			Magnetic Resonance Spectroscopy
		                        			;
		                        		
		                        			Protein Conformation
		                        			;
		                        		
		                        			Proteins
		                        			;
		                        		
		                        			chemistry
		                        			;
		                        		
		                        			physiology
		                        			
		                        		
		                        	
6.A Novel, Potent, Small Molecule AKT Inhibitor Exhibits Efficacy against Lung Cancer Cells In Vitro.
Saketh S. DINAVAHI ; Rajagopalan PRASANNA ; Sriram DHARMARAJAN ; Yogeeswari PERUMAL ; Srikant VISWANADHA
Cancer Research and Treatment 2015;47(4):913-920
		                        		
		                        			
		                        			PURPOSE: Anomalies of Akt regulation, including overexpression in lung cancer, impart resistance to conventional chemotherapy and radiation, thereby implicating this kinase as a therapeutic intervention point. A novel scaffold of Akt inhibitors was developed through virtual screening of chemical databases available at Birla Institute of Technology and Science, Pilani, Hyderabad, based on docking studies using Maestro. A benzothienopyrimidine derivative (BIA-6) was identified as a potential lead molecule that inhibited Akt1 enzyme activity with an IC50 of 256 nM. MATERIALS AND METHODS: BIA-6 was tested for in vitro Akt1 inhibition using a fluorescence resonance energy transfer kit. Anti-proliferative activity was tested in NCI-H460, A549, NCI-H1975, and NCI-H2170 cell lines. The effect of the compound on p-Akt (S473) was estimated. RESULTS: BIA-6 allosterically caused a dose dependent reduction of growth of cell lines with a half maximal growth inhibition (GI50) range of 0.49 muM to 6.6 muM. Cell cycle analysis indicated that BIA-6 caused a G1 phase arrest at < 100 nM but led to apoptosis at higher doses. BIA-6 also exhibited synergism with standard chemotherapeutic agents. CONCLUSION: BIA-6 is a novel, allosteric Akt inhibitor with potent anti-cancer activity in lung cancer cell lines, that effectively blocks the phosphoinositide-3 kinase/Akt pathway with a high margin selectivity towards normal cells.
		                        		
		                        		
		                        		
		                        			Apoptosis
		                        			;
		                        		
		                        			Carcinoma, Non-Small-Cell Lung
		                        			;
		                        		
		                        			Cell Cycle
		                        			;
		                        		
		                        			Cell Line
		                        			;
		                        		
		                        			Databases, Chemical
		                        			;
		                        		
		                        			Drug Synergism
		                        			;
		                        		
		                        			Drug Therapy
		                        			;
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			G1 Phase
		                        			;
		                        		
		                        			Inhibitory Concentration 50
		                        			;
		                        		
		                        			Lung Neoplasms*
		                        			;
		                        		
		                        			Lung*
		                        			;
		                        		
		                        			Mass Screening
		                        			;
		                        		
		                        			Phosphotransferases
		                        			
		                        		
		                        	
7.A more accurate and efficient fluorescent probe of Caspase-8 activity based on flow cytometric fluorescence resonance energy transfer.
Acta Pharmaceutica Sinica 2015;50(3):291-297
		                        		
		                        			
		                        			As a classic fluorescent detect technique, fluorescence resonance energy transfer (FRET) has been widely used in biological researches. Researchers have developed a series of fluorescence detect probes which were based on FRET. Caspase family plays an important role in apoptosis pathway, especially Caspase-8 which located, at the initial of death receptor mediated apoptosis pathway, whose its activation can trigger subsequent precaspases' activation and lead to apoptosis. So it is of great significance to detect the activation of Caspase-8 in apoptosis assay. In this study, a fluorescent probe based on FRET has been designed which can detect the activity change of Caspase-8 in cells. To identify the effectiveness and specificity of the probe, we measure the Caspase-8 activity under the Caspase-8 specifically activated apoptosis inducer RGD-TRAIL with the flow cytometry FRET detection platform. The results show that the probe can respond to the activity change of Caspase-8 in apoptotic cells, and the change can be quantified rapidly by flow cytometry. The study provides a more efficient and convenient detection method of Caspase-8 activity in living cells.
		                        		
		                        		
		                        		
		                        			Apoptosis
		                        			;
		                        		
		                        			Caspase 8
		                        			;
		                        		
		                        			metabolism
		                        			;
		                        		
		                        			Flow Cytometry
		                        			;
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			Fluorescent Dyes
		                        			;
		                        		
		                        			Humans
		                        			
		                        		
		                        	
8.Research methods in protein-protein and protein-nucleic acid interactions and application in the study of human enterovirus A71.
Zhi-Xiao ZHANG ; Ying ZHENG ; Ting-Song HU ; Qi-Han LI ; Quan-Shui FAN
Chinese Journal of Virology 2014;30(5):587-593
		                        		
		                        			
		                        			Methods for analyses of protein-protein interactions include: yeast two hybrid (Y2H), phage dis- play (PD), co-immunoprecipitation (Co-IP), glutathione S-transferase pull-down (GST pull-down), cellular co-localization, far-western blotting, virus overlay protein binding assay (VOPBA), surface plasmon resonance (SPR), and fluorescence resonance energy transfer (FRET). Technologies for the detection of protein-nucleic acid interactions include: yeast one hybrid (Y1H), chromatin immunoprecipitation (ChIP), electrophoretic mobility shift assay (EMSA), Southwestern blotting, reporter gene, Co-IP, GST pull-down, and PD. These methods are often used in the study of the human enterovirus A71 (EV-A71) by our research team. Reviews in the Chinese literature in this field are lacking, so we reviewed applications of these methods in the study of EV-A71. This review may impart important knowledge in the research of other viruses with regard to protein-protein and protein-nucleic acid interactions.
		                        		
		                        		
		                        		
		                        			Electrophoretic Mobility Shift Assay
		                        			;
		                        		
		                        			Enterovirus A, Human
		                        			;
		                        		
		                        			chemistry
		                        			;
		                        		
		                        			genetics
		                        			;
		                        		
		                        			metabolism
		                        			;
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			RNA, Viral
		                        			;
		                        		
		                        			metabolism
		                        			;
		                        		
		                        			Two-Hybrid System Techniques
		                        			;
		                        		
		                        			Viral Proteins
		                        			;
		                        		
		                        			metabolism
		                        			
		                        		
		                        	
9.Study of TGF-β/Smad3 signal pathway using the technology of flurorescence resonance energy transfer.
Weiwei CAO ; Wei LIU ; Weishan WANG ; Zhao CHEN ; Renhao HE ; Jianwei HE
Journal of Biomedical Engineering 2014;31(5):1080-1084
		                        		
		                        			
		                        			The transforming growth factor-β1 (TGF-β1)/Smad3 signal pathway is related to mutiple physiological and pathological generation mechanism of human being. Up to date, however, the spacial and time information on the phosphorylated Smad3 is still unclear. In this study, the process of Smad3 phosphorylation was observed under the physiological state in the living cells. Firstly, the ECFP-Smad3-Citrine (Smad3 biosensor) fusion protein expression vector was constructed and identified. Then the Smad3 biosensor was transfected into 293T cells. The transfection efficiency and the expressions of fusion proteins were observed in 24 hours. Thirdly, Smad3 biosensor flurorescence resonance energy transfer (FRET) was observed with the inversion fluorescence microscope and measured by the MetaFlour FRET 4. 6 software. Smad3 biosensor transfection efficiency was nearly 40% and the fusion protein was seen under the fluorescence microscope. The FRET ratio of Smad3 biosensor in living 293T cells was decreased after 10 minutes incubation with the ligand of TGF-β1. The period of decreasing CFP and enhancing Citrine signals was about 300 seconds. With the technology of FRET, the TGF-β1/Smad3 signal pathway could be real time monitored dynamically under the physiological condition in living cells.
		                        		
		                        		
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			Genetic Vectors
		                        			;
		                        		
		                        			HEK293 Cells
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Microscopy, Fluorescence
		                        			;
		                        		
		                        			Phosphorylation
		                        			;
		                        		
		                        			Signal Transduction
		                        			;
		                        		
		                        			Smad3 Protein
		                        			;
		                        		
		                        			metabolism
		                        			;
		                        		
		                        			Software
		                        			;
		                        		
		                        			Transfection
		                        			;
		                        		
		                        			Transforming Growth Factor beta1
		                        			;
		                        		
		                        			metabolism
		                        			
		                        		
		                        	
10.Applications of FRET technology in the study of mechanotransduction.
Journal of Biomedical Engineering 2013;30(6):1362-1367
		                        		
		                        			
		                        			Mechanical force has essential effects on cellular behaviors such as proliferation, migration and differentiation, and the mechanism of mechanotransduction is still one of the hot spots in mechanobiology study. Traditional methods could not provide accurate evaluation of the protein activation signal upon mechanical stress application. The development of fluorescence protein technology greatly promoted the understanding of mechanotransduction. In particular, genetically-encoded biosensors based on fluorescence resonance energy transfer (FRET) technique has achieved a real-time dynamic observation of living cell signal protein activity, which provides a powerful tool for the in-depth study of biomechanics. In this paper, we provide a summary on recent progress of FRET application in biomechanics. Firstly we introduce the FRET technology, and then we summarize three methods to integrate the mechanical stimulation with the FRET imaging system on cell experiments. After that, the important progress of biomechanical research on signal pathway made by FRET technology, such as cytoskeleton, Rho family, calcium and cellular physical stress visualization, are also discussed. Finally, we point out the bottleneck of the future development in FRET technology, and also make the prospect of the application of FRET in mechanotransduction. In summary, FRET technology provides a powerful tool for the studies of mechanotransduction, which will advance our systematic understanding on the molecular mechanisms about how cells respond to mechanical stimulation.
		                        		
		                        		
		                        		
		                        			Biomechanical Phenomena
		                        			;
		                        		
		                        			Biosensing Techniques
		                        			;
		                        		
		                        			Fluorescence Resonance Energy Transfer
		                        			;
		                        		
		                        			Humans
		                        			;
		                        		
		                        			Luminescent Proteins
		                        			;
		                        		
		                        			chemistry
		                        			;
		                        		
		                        			Mechanotransduction, Cellular
		                        			;
		                        		
		                        			Microscopy, Fluorescence
		                        			;
		                        		
		                        			Signal Transduction
		                        			;
		                        		
		                        			Stress, Mechanical
		                        			
		                        		
		                        	
            
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